RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 TBC1D3Q8IZP1 549 aaPredicted RBP16.48■□□□□ 0.23
SPTLC2-203ENST00000554901 CXorf40AQ8TE69 158 aa16.48■□□□□ 0.23
SPTLC2-203ENST00000554901 KCNH6Q9H252 994 aa16.48■□□□□ 0.23
SPTLC2-203ENST00000554901 FAM114A2Q9NRY5 505 aa16.48■□□□□ 0.23
SPTLC2-203ENST00000554901 C1orf232A0A0U1RR37 186 aa16.47■□□□□ 0.23
SPTLC2-203ENST00000554901 CRTAMO95727 393 aa16.47■□□□□ 0.23
SPTLC2-203ENST00000554901 ELFN1P0C7U0 828 aa16.47■□□□□ 0.23
SPTLC2-203ENST00000554901 HMGCLP35914 325 aa16.47■□□□□ 0.23
SPTLC2-203ENST00000554901 GRIA1P42261 906 aa16.47■□□□□ 0.23
SPTLC2-203ENST00000554901 MAGEA3P43357 314 aa16.47■□□□□ 0.23
SPTLC2-203ENST00000554901 ITGA8P53708 1063 aa16.47■□□□□ 0.23
SPTLC2-203ENST00000554901 SLC7A5Q01650 507 aa16.47■□□□□ 0.23
SPTLC2-203ENST00000554901 CREB5Q02930 508 aa16.47■□□□□ 0.23
SPTLC2-203ENST00000554901 CBLBQ13191 982 aa16.47■□□□□ 0.23
SPTLC2-203ENST00000554901 AGERQ15109 404 aa16.47■□□□□ 0.23
SPTLC2-203ENST00000554901 CNGA3Q16281 694 aa16.47■□□□□ 0.23
SPTLC2-203ENST00000554901 CDKN3Q16667 212 aa16.47■□□□□ 0.23
SPTLC2-203ENST00000554901 KCTD19Q17RG1 926 aaPredicted RBP16.47■□□□□ 0.23
SPTLC2-203ENST00000554901 TMEM259Q4ZIN3 620 aa16.47■□□□□ 0.23
SPTLC2-203ENST00000554901 LRRC73Q5JTD7 316 aa16.47■□□□□ 0.23
SPTLC2-203ENST00000554901 ZNF534Q76KX8 674 aa16.47■□□□□ 0.23
SPTLC2-203ENST00000554901 HORMAD1Q86X24 394 aa16.47■□□□□ 0.23
SPTLC2-203ENST00000554901 CBARPQ8N350 705 aaPredicted RBP16.47■□□□□ 0.23
SPTLC2-203ENST00000554901 FAM160A2Q8N612 972 aaPredicted RBP16.47■□□□□ 0.23
SPTLC2-203ENST00000554901 FOXJ1Q92949 421 aa16.47■□□□□ 0.23
SPTLC2-203ENST00000554901 SERPINB12Q96P63 405 aa16.47■□□□□ 0.23
SPTLC2-203ENST00000554901 RANBP9Q96S59 729 aa16.47■□□□□ 0.23
SPTLC2-203ENST00000554901 GPR174Q9BXC1 333 aa16.47■□□□□ 0.23
SPTLC2-203ENST00000554901 IL22Q9GZX6 179 aa16.47■□□□□ 0.23
SPTLC2-203ENST00000554901 IRF2BPLQ9H1B7 796 aa16.47■□□□□ 0.23
SPTLC2-203ENST00000554901 DUSP15Q9H1R2 295 aaPredicted RBP16.47■□□□□ 0.23
SPTLC2-203ENST00000554901 DPH5Q9H2P9 285 aa16.47■□□□□ 0.23
SPTLC2-203ENST00000554901 ZFYVE1Q9HBF4 777 aa16.47■□□□□ 0.23
SPTLC2-203ENST00000554901 GRHL1Q9NZI5 618 aa16.47■□□□□ 0.23
SPTLC2-203ENST00000554901 BFARQ9NZS9 450 aa16.47■□□□□ 0.23
SPTLC2-203ENST00000554901 DMGDHQ9UI17 866 aaKnown RBP16.47■□□□□ 0.23
SPTLC2-203ENST00000554901 MBD1Q9UIS9 605 aaPredicted RBP16.47■□□□□ 0.23
SPTLC2-203ENST00000554901 ITM2BQ9Y287 266 aa16.47■□□□□ 0.23
SPTLC2-203ENST00000554901 ZNF711Q9Y462 761 aa16.47■□□□□ 0.23
SPTLC2-203ENST00000554901 RGSL1A5PLK6 1076 aa16.46■□□□□ 0.23
SPTLC2-203ENST00000554901 TP73O15350 636 aa16.46■□□□□ 0.23
SPTLC2-203ENST00000554901 MAP3K13O43283 966 aa16.46■□□□□ 0.23
SPTLC2-203ENST00000554901 LATO43561 262 aa16.46■□□□□ 0.23
SPTLC2-203ENST00000554901 RNGTTO60942 597 aaKnown RBP16.46■□□□□ 0.23
SPTLC2-203ENST00000554901 LILRB5O75023 590 aa16.46■□□□□ 0.23
SPTLC2-203ENST00000554901 PPFIA2O75334 1257 aa16.46■□□□□ 0.23
SPTLC2-203ENST00000554901 PRKCGP05129 697 aa16.46■□□□□ 0.23
SPTLC2-203ENST00000554901 LHCGRP22888 699 aa16.46■□□□□ 0.23
SPTLC2-203ENST00000554901 LIG3P49916 1009 aa16.46■□□□□ 0.23
SPTLC2-203ENST00000554901 GUCY2DQ02846 1103 aa16.46■□□□□ 0.23
SPTLC2-203ENST00000554901 RPL6Q02878 288 aaKnown RBP16.46■□□□□ 0.23
SPTLC2-203ENST00000554901 TAF1AQ15573 450 aaPredicted RBP16.46■□□□□ 0.23
SPTLC2-203ENST00000554901 LRRC66Q68CR7 880 aa16.46■□□□□ 0.23
SPTLC2-203ENST00000554901 KIAA0895LQ68EN5 471 aa16.46■□□□□ 0.23
SPTLC2-203ENST00000554901 ZC3H14Q6PJT7 736 aaKnown RBP16.46■□□□□ 0.23
SPTLC2-203ENST00000554901 GLT6D1Q7Z4J2 308 aa16.46■□□□□ 0.23
SPTLC2-203ENST00000554901 TMC3Q7Z5M5 1100 aa16.46■□□□□ 0.23
SPTLC2-203ENST00000554901 CAND1Q86VP6 1230 aaKnown RBP16.46■□□□□ 0.23
SPTLC2-203ENST00000554901 BLOC1S5Q8TDH9 187 aa16.46■□□□□ 0.23
SPTLC2-203ENST00000554901 PTCD2Q8WV60 388 aaKnown RBP16.46■□□□□ 0.23
SPTLC2-203ENST00000554901 PEX13Q92968 403 aa16.46■□□□□ 0.23
SPTLC2-203ENST00000554901 GPR63Q9BZJ6 419 aa16.46■□□□□ 0.23
SPTLC2-203ENST00000554901 FOXP3Q9BZS1 431 aa16.46■□□□□ 0.23
SPTLC2-203ENST00000554901 CDH19Q9H159 772 aa16.46■□□□□ 0.23
SPTLC2-203ENST00000554901 RAD18Q9NS91 495 aa16.46■□□□□ 0.23
SPTLC2-203ENST00000554901 GGT7Q9UJ14 662 aa16.46■□□□□ 0.23
SPTLC2-203ENST00000554901 A0A1W2PQU0 124 aa16.45■□□□□ 0.22
SPTLC2-203ENST00000554901 C2orf81A6NN90 581 aa16.45■□□□□ 0.22
SPTLC2-203ENST00000554901 TM7SF2O76062 418 aa16.45■□□□□ 0.22
SPTLC2-203ENST00000554901 STC1P52823 247 aa16.45■□□□□ 0.22
SPTLC2-203ENST00000554901 ZDHHC20Q5W0Z9 365 aa16.45■□□□□ 0.22
SPTLC2-203ENST00000554901 LPCAT2Q7L5N7 544 aa16.45■□□□□ 0.22
SPTLC2-203ENST00000554901 NLRP9Q7RTR0 991 aa16.45■□□□□ 0.22
SPTLC2-203ENST00000554901 CYP2U1Q7Z449 544 aa16.45■□□□□ 0.22
SPTLC2-203ENST00000554901 PDIK1LQ8N165 341 aa16.45■□□□□ 0.22
SPTLC2-203ENST00000554901 LRRN4CLQ8ND94 238 aa16.45■□□□□ 0.22
SPTLC2-203ENST00000554901 RUBCNQ92622 972 aa16.45■□□□□ 0.22
SPTLC2-203ENST00000554901 ART4Q93070 314 aa16.45■□□□□ 0.22
SPTLC2-203ENST00000554901 ZC3H10Q96K80 434 aaKnown RBP16.45■□□□□ 0.22
SPTLC2-203ENST00000554901 C1QTNF7Q9BXJ2 289 aa16.45■□□□□ 0.22
SPTLC2-203ENST00000554901 C1QTNF2Q9BXJ5 285 aa16.45■□□□□ 0.22
SPTLC2-203ENST00000554901 PHACTR1Q9C0D0 580 aa16.45■□□□□ 0.22
SPTLC2-203ENST00000554901 EPB41L5Q9HCM4 733 aa16.45■□□□□ 0.22
SPTLC2-203ENST00000554901 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.45■□□□□ 0.22
SPTLC2-203ENST00000554901 NFKBIL1Q9UBC1 381 aaPredicted RBP16.45■□□□□ 0.22
SPTLC2-203ENST00000554901 RIMKLBQ9ULI2 386 aa16.45■□□□□ 0.22
SPTLC2-203ENST00000554901 DMTF1Q9Y222 760 aa16.45■□□□□ 0.22
SPTLC2-203ENST00000554901 SPO11Q9Y5K1 396 aa16.45■□□□□ 0.22
SPTLC2-203ENST00000554901 MAGEB16A2A368 324 aa16.45■□□□□ 0.22
SPTLC2-203ENST00000554901 HEATR9A2RTY3 570 aa16.45■□□□□ 0.22
SPTLC2-203ENST00000554901 FAM47DPA6NHR8 397 aa16.45■□□□□ 0.22
SPTLC2-203ENST00000554901 SDR42E2A6NKP2 422 aa16.45■□□□□ 0.22
SPTLC2-203ENST00000554901 METTL12A8MUP2 240 aa16.45■□□□□ 0.22
SPTLC2-203ENST00000554901 CLDN7O95471 211 aa16.45■□□□□ 0.22
SPTLC2-203ENST00000554901 PIRTP0C851 137 aa16.45■□□□□ 0.22
SPTLC2-203ENST00000554901 C6P13671 934 aa16.45■□□□□ 0.22
SPTLC2-203ENST00000554901 ADRA1DP25100 572 aa16.45■□□□□ 0.22
SPTLC2-203ENST00000554901 TERF1P54274 439 aa16.45■□□□□ 0.22
SPTLC2-203ENST00000554901 PTSQ03393 145 aa16.45■□□□□ 0.22
SPTLC2-203ENST00000554901 SGCGQ13326 291 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms