RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 PCCBP05166 539 aa8.75□□□□□ -1.01
ACTN1-213ENST00000554508 ANXA6P08133 673 aa8.75□□□□□ -1.01
ACTN1-213ENST00000554508 CTSEP14091 401 aa8.75□□□□□ -1.01
ACTN1-213ENST00000554508 VIPR1P32241 457 aa8.75□□□□□ -1.01
ACTN1-213ENST00000554508 TRIM23P36406 574 aa8.75□□□□□ -1.01
ACTN1-213ENST00000554508 SLC1A1P43005 524 aa8.75□□□□□ -1.01
ACTN1-213ENST00000554508 HK3P52790 923 aa8.75□□□□□ -1.01
ACTN1-213ENST00000554508 KIAA1024LP59773 190 aa8.75□□□□□ -1.01
ACTN1-213ENST00000554508 MAXP61244 160 aa8.75□□□□□ -1.01
ACTN1-213ENST00000554508 INSM1Q01101 510 aaPredicted RBP8.75□□□□□ -1.01
ACTN1-213ENST00000554508 SEMG2Q02383 582 aa8.75□□□□□ -1.01
ACTN1-213ENST00000554508 ITKQ08881 620 aa8.75□□□□□ -1.01
ACTN1-213ENST00000554508 TRAF2Q12933 501 aa8.75□□□□□ -1.01
ACTN1-213ENST00000554508 TARDBPQ13148 414 aaKnown RBP eCLIP8.75□□□□□ -1.01
ACTN1-213ENST00000554508 ARHGEF7Q14155 803 aa8.75□□□□□ -1.01
ACTN1-213ENST00000554508 RTP5Q14D33 572 aa8.75□□□□□ -1.01
ACTN1-213ENST00000554508 ACOX1Q15067 660 aa8.75□□□□□ -1.01
ACTN1-213ENST00000554508 ELOCQ15369 112 aa8.75□□□□□ -1.01
ACTN1-213ENST00000554508 DEFB133Q30KQ1 61 aa8.75□□□□□ -1.01
ACTN1-213ENST00000554508 PRRT3Q5FWE3 981 aa8.75□□□□□ -1.01
ACTN1-213ENST00000554508 C6orf132Q5T0Z8 1188 aa8.75□□□□□ -1.01
ACTN1-213ENST00000554508 ARMC12Q5T9G4 340 aa8.75□□□□□ -1.01
ACTN1-213ENST00000554508 LRRC38Q5VT99 294 aa8.75□□□□□ -1.01
ACTN1-213ENST00000554508 ALG1LQ6GMV1 187 aa8.75□□□□□ -1.01
ACTN1-213ENST00000554508 ESRP1Q6NXG1 681 aaKnown RBP8.75□□□□□ -1.01
ACTN1-213ENST00000554508 PNCKQ6P2M8 343 aa8.75□□□□□ -1.01
ACTN1-213ENST00000554508 LVRNQ6Q4G3 990 aa8.75□□□□□ -1.01
ACTN1-213ENST00000554508 KDM7AQ6ZMT4 941 aa8.75□□□□□ -1.01
ACTN1-213ENST00000554508 USP45Q70EL2 814 aa8.75□□□□□ -1.01
ACTN1-213ENST00000554508 GKN2Q86XP6 184 aa8.75□□□□□ -1.01
ACTN1-213ENST00000554508 MARCH9Q86YJ5 346 aa8.75□□□□□ -1.01
ACTN1-213ENST00000554508 CPNE8Q86YQ8 564 aa8.75□□□□□ -1.01
ACTN1-213ENST00000554508 TMTC1Q8IUR5 882 aa8.75□□□□□ -1.01
ACTN1-213ENST00000554508 CBARPQ8N350 705 aaPredicted RBP8.75□□□□□ -1.01
ACTN1-213ENST00000554508 PQLC3Q8N755 202 aa8.75□□□□□ -1.01
ACTN1-213ENST00000554508 DCBLD1Q8N8Z6 715 aa8.75□□□□□ -1.01
ACTN1-213ENST00000554508 MDM1Q8TC05 714 aa8.75□□□□□ -1.01
ACTN1-213ENST00000554508 SCRN2Q96FV2 425 aa8.75□□□□□ -1.01
ACTN1-213ENST00000554508 COQ10AQ96MF6 247 aa8.75□□□□□ -1.01
ACTN1-213ENST00000554508 WDR92Q96MX6 357 aa8.75□□□□□ -1.01
ACTN1-213ENST00000554508 ZNF830Q96NB3 372 aaPredicted RBP8.75□□□□□ -1.01
ACTN1-213ENST00000554508 RNF157Q96PX1 679 aa8.75□□□□□ -1.01
ACTN1-213ENST00000554508 SEMA3CQ99985 751 aa8.75□□□□□ -1.01
ACTN1-213ENST00000554508 LRRC61Q9BV99 259 aa8.75□□□□□ -1.01
ACTN1-213ENST00000554508 BOCQ9BWV1 1114 aa8.75□□□□□ -1.01
ACTN1-213ENST00000554508 MAK16Q9BXY0 300 aaKnown RBP8.75□□□□□ -1.01
ACTN1-213ENST00000554508 TCEAL2Q9H3H9 227 aaPredicted RBP8.75□□□□□ -1.01
ACTN1-213ENST00000554508 RBM22Q9NW64 420 aaKnown RBP eCLIP8.75□□□□□ -1.013e-6■■□□□ 13.2
ACTN1-213ENST00000554508 B4GALT6Q9UBX8 382 aa8.75□□□□□ -1.01
ACTN1-213ENST00000554508 KLQ9UEF7 1012 aa8.75□□□□□ -1.01
ACTN1-213ENST00000554508 DGKBQ9Y6T7 804 aa8.75□□□□□ -1.01
ACTN1-213ENST00000554508 U3KQA8 63 aa8.75□□□□□ -1.01
ACTN1-213ENST00000554508 DMXL2Q8TDJ6 3036 aa8.75□□□□□ -1.01
ACTN1-213ENST00000554508 FAM208BQ5VWN6 2430 aa8.74□□□□□ -1.01
ACTN1-213ENST00000554508 KIF26BQ2KJY2 2108 aa8.74□□□□□ -1.01
ACTN1-213ENST00000554508 EME2A4GXA9 379 aaPredicted RBP8.74□□□□□ -1.01
ACTN1-213ENST00000554508 SOWAHDA6NJG2 315 aa8.74□□□□□ -1.01
ACTN1-213ENST00000554508 A8MX80 341 aa8.74□□□□□ -1.01
ACTN1-213ENST00000554508 TNFRSF10CO14798 259 aa8.74□□□□□ -1.01
ACTN1-213ENST00000554508 YY2O15391 372 aa8.74□□□□□ -1.01
ACTN1-213ENST00000554508 OPA1O60313 960 aa8.74□□□□□ -1.01
ACTN1-213ENST00000554508 GCATO75600 419 aa8.74□□□□□ -1.01
ACTN1-213ENST00000554508 HEXIM1O94992 359 aaKnown RBP8.74□□□□□ -1.01
ACTN1-213ENST00000554508 IPO7O95373 1038 aaKnown RBP8.74□□□□□ -1.01
ACTN1-213ENST00000554508 MT-CO3P00414 261 aa8.74□□□□□ -1.01
ACTN1-213ENST00000554508 CCNB1P14635 433 aa8.74□□□□□ -1.01
ACTN1-213ENST00000554508 TSHRP16473 764 aa8.74□□□□□ -1.01
ACTN1-213ENST00000554508 ZFXP17010 805 aaPredicted RBP8.74□□□□□ -1.01
ACTN1-213ENST00000554508 GM2AP17900 193 aa8.74□□□□□ -1.01
ACTN1-213ENST00000554508 CA4P22748 312 aa8.74□□□□□ -1.01
ACTN1-213ENST00000554508 TEAD1P28347 426 aa8.74□□□□□ -1.01
ACTN1-213ENST00000554508 CYLC1P35663 651 aaPredicted RBP8.74□□□□□ -1.01
ACTN1-213ENST00000554508 HADHBP55084 474 aaKnown RBP8.74□□□□□ -1.01
ACTN1-213ENST00000554508 SRP54P61011 504 aaKnown RBP8.74□□□□□ -1.01
ACTN1-213ENST00000554508 CYP4F3Q08477 520 aa8.74□□□□□ -1.01
ACTN1-213ENST00000554508 SLC10A2Q12908 348 aaPredicted RBP8.74□□□□□ -1.01
ACTN1-213ENST00000554508 C1orf61Q13536 156 aa8.74□□□□□ -1.01
ACTN1-213ENST00000554508 NR0B2Q15466 257 aa8.74□□□□□ -1.01
ACTN1-213ENST00000554508 SPA17Q15506 151 aa8.74□□□□□ -1.01
ACTN1-213ENST00000554508 CNGA3Q16281 694 aa8.74□□□□□ -1.01
ACTN1-213ENST00000554508 ALG11Q2TAA5 492 aa8.74□□□□□ -1.01
ACTN1-213ENST00000554508 ODF2Q5BJF6 829 aa8.74□□□□□ -1.01
ACTN1-213ENST00000554508 CDCP2Q5VXM1 449 aa8.74□□□□□ -1.01
ACTN1-213ENST00000554508 HID1Q8IV36 788 aa8.74□□□□□ -1.01
ACTN1-213ENST00000554508 RAVER1Q8IY67 606 aaKnown RBP8.74□□□□□ -1.01
ACTN1-213ENST00000554508 CCDC13Q8IYE1 715 aa8.74□□□□□ -1.01
ACTN1-213ENST00000554508 CCDC170Q8IYT3 715 aa8.74□□□□□ -1.01
ACTN1-213ENST00000554508 RBFAQ8N0V3 343 aa8.74□□□□□ -1.01
ACTN1-213ENST00000554508 PLA2G15Q8NCC3 412 aa8.74□□□□□ -1.01
ACTN1-213ENST00000554508 CCNYQ8ND76 341 aa8.74□□□□□ -1.01
ACTN1-213ENST00000554508 OR6C4Q8NGE1 309 aa8.74□□□□□ -1.01
ACTN1-213ENST00000554508 OR56A4Q8NGH8 313 aa8.74□□□□□ -1.01
ACTN1-213ENST00000554508 WDR48Q8TAF3 677 aa8.74□□□□□ -1.01
ACTN1-213ENST00000554508 IFI44Q8TCB0 444 aa8.74□□□□□ -1.01
ACTN1-213ENST00000554508 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.74□□□□□ -1.01
ACTN1-213ENST00000554508 PIH1D2Q8WWB5 315 aa8.74□□□□□ -1.01
ACTN1-213ENST00000554508 RAPGEF5Q92565 580 aa8.74□□□□□ -1.01
ACTN1-213ENST00000554508 TSACCQ96A04 125 aaPredicted RBP8.74□□□□□ -1.01
ACTN1-213ENST00000554508 FUBP1Q96AE4 644 aaKnown RBP8.74□□□□□ -1.01
ACTN1-213ENST00000554508 HDAC11Q96DB2 347 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms