RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 SUSD6Q92537 303 aa6.49□□□□□ -1.37
SCFD1-212ENST00000554486 KRT35Q92764 455 aa6.49□□□□□ -1.37
SCFD1-212ENST00000554486 WBP2Q969T9 261 aa6.49□□□□□ -1.37
SCFD1-212ENST00000554486 SLC39A13Q96H72 371 aa6.49□□□□□ -1.37
SCFD1-212ENST00000554486 CDK5RAP1Q96SZ6 601 aaKnown RBP6.49□□□□□ -1.37
SCFD1-212ENST00000554486 MENTQ9BUN1 341 aa6.49□□□□□ -1.37
SCFD1-212ENST00000554486 TLR10Q9BXR5 811 aa6.49□□□□□ -1.37
SCFD1-212ENST00000554486 PITHD1Q9GZP4 211 aaPredicted RBP6.49□□□□□ -1.37
SCFD1-212ENST00000554486 TASP1Q9H6P5 420 aa6.49□□□□□ -1.37
SCFD1-212ENST00000554486 UBE2ZQ9H832 354 aaPredicted RBP6.49□□□□□ -1.37
SCFD1-212ENST00000554486 FAM204AQ9H8W3 233 aa6.49□□□□□ -1.37
SCFD1-212ENST00000554486 TRPC7Q9HCX4 862 aa6.49□□□□□ -1.37
SCFD1-212ENST00000554486 ANLNQ9NQW6 1124 aa6.49□□□□□ -1.37
SCFD1-212ENST00000554486 GKN1Q9NS71 199 aa6.49□□□□□ -1.37
SCFD1-212ENST00000554486 COX16Q9P0S2 106 aa6.49□□□□□ -1.37
SCFD1-212ENST00000554486 PCSK1NQ9UHG2 260 aa6.49□□□□□ -1.37
SCFD1-212ENST00000554486 LCMT1Q9UIC8 334 aa6.49□□□□□ -1.37
SCFD1-212ENST00000554486 CD207Q9UJ71 328 aa6.49□□□□□ -1.37
SCFD1-212ENST00000554486 RASAL2Q9UJF2 1139 aa6.49□□□□□ -1.37
SCFD1-212ENST00000554486 STAP1Q9ULZ2 295 aa6.49□□□□□ -1.37
SCFD1-212ENST00000554486 PACSIN2Q9UNF0 486 aaPredicted RBP6.49□□□□□ -1.37
SCFD1-212ENST00000554486 DOCK4Q8N1I0 1966 aa6.48□□□□□ -1.37
SCFD1-212ENST00000554486 KCNU1A8MYU2 1149 aa6.48□□□□□ -1.37
SCFD1-212ENST00000554486 H3BQ06 376 aaPredicted RBP6.48□□□□□ -1.37
SCFD1-212ENST00000554486 SPOPO43791 374 aa6.48□□□□□ -1.37
SCFD1-212ENST00000554486 STC2O76061 302 aa6.48□□□□□ -1.37
SCFD1-212ENST00000554486 RNF8O76064 485 aa6.48□□□□□ -1.37
SCFD1-212ENST00000554486 PRAMEF12O95522 483 aa6.48□□□□□ -1.37
SCFD1-212ENST00000554486 F9P00740 461 aa6.48□□□□□ -1.37
SCFD1-212ENST00000554486 KLKB1P03952 638 aa6.48□□□□□ -1.37
SCFD1-212ENST00000554486 HMBSP08397 361 aa6.48□□□□□ -1.37
SCFD1-212ENST00000554486 MBL2P11226 248 aaPredicted RBP6.48□□□□□ -1.37
SCFD1-212ENST00000554486 KCNA5P22460 613 aa6.48□□□□□ -1.37
SCFD1-212ENST00000554486 MSNP26038 577 aaKnown RBP6.48□□□□□ -1.37
SCFD1-212ENST00000554486 CTNNA2P26232 953 aa6.48□□□□□ -1.37
SCFD1-212ENST00000554486 MTHFRP42898 656 aa6.48□□□□□ -1.37
SCFD1-212ENST00000554486 SSR1P43307 286 aaKnown RBP6.48□□□□□ -1.37
SCFD1-212ENST00000554486 MARCKSL1P49006 195 aa6.48□□□□□ -1.37
SCFD1-212ENST00000554486 PEX5P50542 639 aa6.48□□□□□ -1.37
SCFD1-212ENST00000554486 ARSEP51690 589 aa6.48□□□□□ -1.37
SCFD1-212ENST00000554486 KCNQ1P51787 676 aa6.48□□□□□ -1.37
SCFD1-212ENST00000554486 TBX4P57082 545 aa6.48□□□□□ -1.37
SCFD1-212ENST00000554486 SCAND1P57086 179 aa6.48□□□□□ -1.37
SCFD1-212ENST00000554486 GNG11P61952 73 aa6.48□□□□□ -1.37
SCFD1-212ENST00000554486 ADCY2Q08462 1091 aa6.48□□□□□ -1.37
SCFD1-212ENST00000554486 TOP3AQ13472 1001 aaPredicted RBP6.48□□□□□ -1.37
SCFD1-212ENST00000554486 ARHGAP15Q53QZ3 475 aa6.48□□□□□ -1.37
SCFD1-212ENST00000554486 CT83Q5H943 113 aa6.48□□□□□ -1.37
SCFD1-212ENST00000554486 PITRM1Q5JRX3 1037 aa6.48□□□□□ -1.37
SCFD1-212ENST00000554486 BRMS1LQ5PSV4 323 aa6.48□□□□□ -1.37
SCFD1-212ENST00000554486 ATAT1Q5SQI0 421 aa6.48□□□□□ -1.37
SCFD1-212ENST00000554486 LRRC38Q5VT99 294 aa6.48□□□□□ -1.37
SCFD1-212ENST00000554486 TMEM200BQ69YZ2 307 aa6.48□□□□□ -1.37
SCFD1-212ENST00000554486 CES5AQ6NT32 575 aa6.48□□□□□ -1.37
SCFD1-212ENST00000554486 SCYL2Q6P3W7 929 aa6.48□□□□□ -1.37
SCFD1-212ENST00000554486 TRMT10BQ6PF06 316 aaKnown RBP6.48□□□□□ -1.37
SCFD1-212ENST00000554486 ESPNLQ6ZVH7 1005 aa6.48□□□□□ -1.37
SCFD1-212ENST00000554486 PEX26Q7Z412 305 aa6.48□□□□□ -1.37
SCFD1-212ENST00000554486 TADA2BQ86TJ2 420 aa6.48□□□□□ -1.37
SCFD1-212ENST00000554486 FAM131BQ86XD5 332 aa6.48□□□□□ -1.37
SCFD1-212ENST00000554486 CMTM8Q8IZV2 173 aa6.48□□□□□ -1.37
SCFD1-212ENST00000554486 SYCE1Q8N0S2 351 aa6.48□□□□□ -1.37
SCFD1-212ENST00000554486 CCDC185Q8N715 623 aa6.48□□□□□ -1.37
SCFD1-212ENST00000554486 CALML6Q8TD86 181 aa6.48□□□□□ -1.37
SCFD1-212ENST00000554486 PPM1EQ8WY54 764 aa6.48□□□□□ -1.37
SCFD1-212ENST00000554486 FGF13Q92913 245 aa6.48□□□□□ -1.37
SCFD1-212ENST00000554486 USP13Q92995 863 aaPredicted RBP6.48□□□□□ -1.37
SCFD1-212ENST00000554486 MBD6Q96DN6 1003 aa6.48□□□□□ -1.37
SCFD1-212ENST00000554486 HES6Q96HZ4 224 aa6.48□□□□□ -1.37
SCFD1-212ENST00000554486 C16orf45Q96MC5 204 aaPredicted RBP6.48□□□□□ -1.37
SCFD1-212ENST00000554486 RIPOR3Q96MK2 946 aa6.48□□□□□ -1.37
SCFD1-212ENST00000554486 SERPINB11Q96P15 392 aa6.48□□□□□ -1.37
SCFD1-212ENST00000554486 ALS2CR12Q96Q35 445 aa6.48□□□□□ -1.37
SCFD1-212ENST00000554486 MYADMQ96S97 322 aa6.48□□□□□ -1.37
SCFD1-212ENST00000554486 NCAPGQ9BPX3 1015 aa6.48□□□□□ -1.37
SCFD1-212ENST00000554486 SNRNP25Q9BV90 132 aaKnown RBP6.48□□□□□ -1.37
SCFD1-212ENST00000554486 MAGEB5Q9BZ81 275 aa6.48□□□□□ -1.37
SCFD1-212ENST00000554486 POMKQ9H5K3 350 aa6.48□□□□□ -1.37
SCFD1-212ENST00000554486 GPATCH2LQ9NWQ4 482 aa6.48□□□□□ -1.37
SCFD1-212ENST00000554486 SMPD4Q9NXE4 827 aa6.48□□□□□ -1.37
SCFD1-212ENST00000554486 ARHGEF38Q9NXL2 777 aa6.48□□□□□ -1.37
SCFD1-212ENST00000554486 XPO7Q9UIA9 1087 aaKnown RBP6.48□□□□□ -1.37
SCFD1-212ENST00000554486 AMFRQ9UKV5 643 aa6.48□□□□□ -1.37
SCFD1-212ENST00000554486 USP18Q9UMW8 372 aa6.48□□□□□ -1.37
SCFD1-212ENST00000554486 ARHGAP26Q9UNA1 814 aa6.48□□□□□ -1.37
SCFD1-212ENST00000554486 CCL26Q9Y258 94 aa6.48□□□□□ -1.37
SCFD1-212ENST00000554486 HBS1LQ9Y450 684 aaKnown RBP6.48□□□□□ -1.37
SCFD1-212ENST00000554486 USP15Q9Y4E8 981 aaPredicted RBP6.48□□□□□ -1.37
SCFD1-212ENST00000554486 PCDHA3Q9Y5H8 950 aa6.48□□□□□ -1.37
SCFD1-212ENST00000554486 CPQQ9Y646 472 aa6.48□□□□□ -1.37
SCFD1-212ENST00000554486 MYO10Q9HD67 2058 aa6.48□□□□□ -1.37
SCFD1-212ENST00000554486 KIF26AQ9ULI4 1882 aaPredicted RBP6.47□□□□□ -1.37
SCFD1-212ENST00000554486 NUP205Q92621 2012 aa6.47□□□□□ -1.37
SCFD1-212ENST00000554486 XIRP2A4UGR9 3374 aa6.47□□□□□ -1.37
SCFD1-212ENST00000554486 H0Y858 1186 aa6.47□□□□□ -1.37
SCFD1-212ENST00000554486 LEFTY2O00292 366 aa6.47□□□□□ -1.37
SCFD1-212ENST00000554486 MBTPS2O43462 519 aa6.47□□□□□ -1.37
SCFD1-212ENST00000554486 PSTPIP1O43586 416 aa6.47□□□□□ -1.37
SCFD1-212ENST00000554486 PRPSAP2O60256 369 aa6.47□□□□□ -1.37
SCFD1-212ENST00000554486 ZNF500O60304 480 aaPredicted RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms