RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 KIAA1161Q6NSJ0 714 aa12.27□□□□□ -0.45
SHMT2-209ENST00000553949 CRTC1Q6UUV9 634 aa12.27□□□□□ -0.45
SHMT2-209ENST00000553949 TRIM69Q86WT6 500 aa12.27□□□□□ -0.45
SHMT2-209ENST00000553949 HORMAD1Q86X24 394 aa12.27□□□□□ -0.45
SHMT2-209ENST00000553949 DEFB119Q8N690 84 aa12.27□□□□□ -0.45
SHMT2-209ENST00000553949 DNAAF3Q8N9W5 541 aa12.27□□□□□ -0.45
SHMT2-209ENST00000553949 MCUQ8NE86 351 aa12.27□□□□□ -0.45
SHMT2-209ENST00000553949 PRSS33Q8NF86 280 aa12.27□□□□□ -0.45
SHMT2-209ENST00000553949 CADM4Q8NFZ8 388 aa12.27□□□□□ -0.45
SHMT2-209ENST00000553949 PCED1AQ9H1Q7 454 aa12.27□□□□□ -0.45
SHMT2-209ENST00000553949 DPH5Q9H2P9 285 aa12.27□□□□□ -0.45
SHMT2-209ENST00000553949 ZNF711Q9Y462 761 aa12.27□□□□□ -0.45
SHMT2-209ENST00000553949 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.26□□□□□ -0.45
SHMT2-209ENST00000553949 IGLON5A6NGN9 336 aa12.26□□□□□ -0.45
SHMT2-209ENST00000553949 METTL12A8MUP2 240 aa12.26□□□□□ -0.45
SHMT2-209ENST00000553949 GOLGA8MH3BSY2 632 aa12.26□□□□□ -0.45
SHMT2-209ENST00000553949 AURKAO14965 403 aa12.26□□□□□ -0.45
SHMT2-209ENST00000553949 FSBPO95073 299 aa12.26□□□□□ -0.45
SHMT2-209ENST00000553949 CLDN7O95471 211 aa12.26□□□□□ -0.45
SHMT2-209ENST00000553949 IGHV4-34P06331 123 aa12.26□□□□□ -0.45
SHMT2-209ENST00000553949 ELFN1P0C7U0 828 aa12.26□□□□□ -0.45
SHMT2-209ENST00000553949 C6P13671 934 aa12.26□□□□□ -0.45
SHMT2-209ENST00000553949 ZNF30P17039 623 aa12.26□□□□□ -0.45
SHMT2-209ENST00000553949 CCR5P51681 352 aa12.26□□□□□ -0.45
SHMT2-209ENST00000553949 ITGA8P53708 1063 aa12.26□□□□□ -0.45
SHMT2-209ENST00000553949 TCF15Q12870 199 aa12.26□□□□□ -0.45
SHMT2-209ENST00000553949 MORF4L2Q15014 288 aa12.26□□□□□ -0.45
SHMT2-209ENST00000553949 ZNF284Q2VY69 593 aa12.26□□□□□ -0.45
SHMT2-209ENST00000553949 TMEM259Q4ZIN3 620 aa12.26□□□□□ -0.45
SHMT2-209ENST00000553949 HIBCHQ6NVY1 386 aaPredicted RBP12.26□□□□□ -0.45
SHMT2-209ENST00000553949 LRRC8BQ6P9F7 803 aa12.26□□□□□ -0.45
SHMT2-209ENST00000553949 LIPIQ6XZB0 460 aa12.26□□□□□ -0.45
SHMT2-209ENST00000553949 ZNF534Q76KX8 674 aa12.26□□□□□ -0.45
SHMT2-209ENST00000553949 CEP68Q76N32 757 aa12.26□□□□□ -0.45
SHMT2-209ENST00000553949 LPCAT2Q7L5N7 544 aa12.26□□□□□ -0.45
SHMT2-209ENST00000553949 LYSMD3Q7Z3D4 306 aa12.26□□□□□ -0.45
SHMT2-209ENST00000553949 HOOK3Q86VS8 718 aa12.26□□□□□ -0.45
SHMT2-209ENST00000553949 TMEFF1Q8IYR6 380 aa12.26□□□□□ -0.45
SHMT2-209ENST00000553949 BBOF1Q8ND07 529 aa12.26□□□□□ -0.45
SHMT2-209ENST00000553949 BLOC1S5Q8TDH9 187 aa12.26□□□□□ -0.45
SHMT2-209ENST00000553949 HINFPQ9BQA5 517 aa12.26□□□□□ -0.45
SHMT2-209ENST00000553949 DUSP15Q9H1R2 295 aaPredicted RBP12.26□□□□□ -0.45
SHMT2-209ENST00000553949 TRABDQ9H4I3 376 aa12.26□□□□□ -0.45
SHMT2-209ENST00000553949 ZFYVE1Q9HBF4 777 aa12.26□□□□□ -0.45
SHMT2-209ENST00000553949 HACD3Q9P035 362 aa12.26□□□□□ -0.45
SHMT2-209ENST00000553949 WHRNQ9P202 907 aa12.26□□□□□ -0.45
SHMT2-209ENST00000553949 ZFR2Q9UPR6 939 aaKnown RBP12.26□□□□□ -0.45
SHMT2-209ENST00000553949 SHOC2Q9UQ13 582 aa12.26□□□□□ -0.45
SHMT2-209ENST00000553949 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.26□□□□□ -0.45
SHMT2-209ENST00000553949 ZNF318Q5VUA4 2279 aa12.26□□□□□ -0.45
SHMT2-209ENST00000553949 WDFY4Q6ZS81 3184 aa12.26□□□□□ -0.45
SHMT2-209ENST00000553949 SMAPO00193 183 aa12.25□□□□□ -0.45
SHMT2-209ENST00000553949 AP3B1O00203 1094 aa12.25□□□□□ -0.45
SHMT2-209ENST00000553949 PSMD11O00231 422 aa12.25□□□□□ -0.45
SHMT2-209ENST00000553949 NDC80O14777 642 aa12.25□□□□□ -0.45
SHMT2-209ENST00000553949 TP73O15350 636 aa12.25□□□□□ -0.45
SHMT2-209ENST00000553949 LATO43561 262 aa12.25□□□□□ -0.45
SHMT2-209ENST00000553949 LZTS3O60299 673 aaPredicted RBP12.25□□□□□ -0.45
SHMT2-209ENST00000553949 TM7SF2O76062 418 aa12.25□□□□□ -0.45
SHMT2-209ENST00000553949 SLC4A1P02730 911 aa12.25□□□□□ -0.45
SHMT2-209ENST00000553949 MAT2AP31153 395 aaKnown RBP12.25□□□□□ -0.45
SHMT2-209ENST00000553949 STC1P52823 247 aa12.25□□□□□ -0.45
SHMT2-209ENST00000553949 DRG2P55039 364 aaKnown RBP12.25□□□□□ -0.45
SHMT2-209ENST00000553949 SESN2P58004 480 aaPredicted RBP12.25□□□□□ -0.45
SHMT2-209ENST00000553949 GUCY2DQ02846 1103 aa12.25□□□□□ -0.45
SHMT2-209ENST00000553949 PTSQ03393 145 aa12.25□□□□□ -0.45
SHMT2-209ENST00000553949 CALCOCO2Q13137 446 aa12.25□□□□□ -0.45
SHMT2-209ENST00000553949 SIM2Q14190 667 aaPredicted RBP12.25□□□□□ -0.45
SHMT2-209ENST00000553949 ACOX1Q15067 660 aa12.25□□□□□ -0.45
SHMT2-209ENST00000553949 PLK5Q496M5 336 aa12.25□□□□□ -0.45
SHMT2-209ENST00000553949 SPDYCQ5MJ68 293 aa12.25□□□□□ -0.45
SHMT2-209ENST00000553949 PMS2CLQ68D20 193 aa12.25□□□□□ -0.45
SHMT2-209ENST00000553949 DENND2CQ68D51 928 aa12.25□□□□□ -0.45
SHMT2-209ENST00000553949 ZC3H14Q6PJT7 736 aaKnown RBP12.25□□□□□ -0.45
SHMT2-209ENST00000553949 GLT6D1Q7Z4J2 308 aa12.25□□□□□ -0.45
SHMT2-209ENST00000553949 HSD11B1LQ7Z5J1 315 aa12.25□□□□□ -0.45
SHMT2-209ENST00000553949 TMC3Q7Z5M5 1100 aa12.25□□□□□ -0.45
SHMT2-209ENST00000553949 CAND1Q86VP6 1230 aaKnown RBP12.25□□□□□ -0.45
SHMT2-209ENST00000553949 CBARPQ8N350 705 aaPredicted RBP12.25□□□□□ -0.45
SHMT2-209ENST00000553949 BRSK1Q8TDC3 778 aa12.25□□□□□ -0.45
SHMT2-209ENST00000553949 BIRC7Q96CA5 298 aa12.25□□□□□ -0.45
SHMT2-209ENST00000553949 EID2BQ96D98 161 aa12.25□□□□□ -0.45
SHMT2-209ENST00000553949 HSPA12BQ96MM6 686 aa12.25□□□□□ -0.45
SHMT2-209ENST00000553949 SERPINB12Q96P63 405 aa12.25□□□□□ -0.45
SHMT2-209ENST00000553949 GPR63Q9BZJ6 419 aa12.25□□□□□ -0.45
SHMT2-209ENST00000553949 XAB2Q9HCS7 855 aaKnown RBP12.25□□□□□ -0.45
SHMT2-209ENST00000553949 ANAPC5Q9UJX4 755 aa12.25□□□□□ -0.45
SHMT2-209ENST00000553949 COQ6Q9Y2Z9 468 aa12.25□□□□□ -0.45
SHMT2-209ENST00000553949 R4GN57 208 aa12.25□□□□□ -0.45
SHMT2-209ENST00000553949 ESYT3A0FGR9 886 aa12.24□□□□□ -0.45
SHMT2-209ENST00000553949 GOLGA8CPA6NN73 597 aa12.24□□□□□ -0.45
SHMT2-209ENST00000553949 MEI4A8MW99 385 aa12.24□□□□□ -0.45
SHMT2-209ENST00000553949 AVILO75366 819 aa12.24□□□□□ -0.45
SHMT2-209ENST00000553949 RECQL5O94762 991 aaPredicted RBP12.24□□□□□ -0.45
SHMT2-209ENST00000553949 SLU7O95391 586 aaKnown RBP12.24□□□□□ -0.45
SHMT2-209ENST00000553949 CRTAMO95727 393 aa12.24□□□□□ -0.45
SHMT2-209ENST00000553949 PAK4O96013 591 aaPredicted RBP12.24□□□□□ -0.45
SHMT2-209ENST00000553949 C1SP09871 688 aa12.24□□□□□ -0.45
SHMT2-209ENST00000553949 MLNP12872 115 aa12.24□□□□□ -0.45
SHMT2-209ENST00000553949 GM2AP17900 193 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms