RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 DTLQ9NZJ0 730 aa18.27■□□□□ 0.52
SHMT2-206ENST00000553529 RCOR3Q9P2K3 495 aaPredicted RBP18.27■□□□□ 0.52
SHMT2-206ENST00000553529 CLCA2Q9UQC9 943 aa18.27■□□□□ 0.52
SHMT2-206ENST00000553529 RAI2Q9Y5P3 530 aa18.27■□□□□ 0.52
SHMT2-206ENST00000553529 LAMA5O15230 3695 aa18.27■□□□□ 0.51
SHMT2-206ENST00000553529 AKR1B15C9JRZ8 316 aaPredicted RBP18.26■□□□□ 0.51
SHMT2-206ENST00000553529 AGRPO00253 132 aa18.26■□□□□ 0.51
SHMT2-206ENST00000553529 HEXIM1O94992 359 aaKnown RBP18.26■□□□□ 0.51
SHMT2-206ENST00000553529 SERPINB6P35237 376 aa18.26■□□□□ 0.51
SHMT2-206ENST00000553529 POLD2P49005 469 aa18.26■□□□□ 0.51
SHMT2-206ENST00000553529 MARCKSL1P49006 195 aa18.26■□□□□ 0.51
SHMT2-206ENST00000553529 HK3P52790 923 aa18.26■□□□□ 0.51
SHMT2-206ENST00000553529 SRP54P61011 504 aaKnown RBP18.26■□□□□ 0.51
SHMT2-206ENST00000553529 YPEL5P62699 121 aa18.26■□□□□ 0.51
SHMT2-206ENST00000553529 DYNLT1P63172 113 aa18.26■□□□□ 0.51
SHMT2-206ENST00000553529 PTK2BQ14289 1009 aa18.26■□□□□ 0.51
SHMT2-206ENST00000553529 Q6ZVL8 140 aa18.26■□□□□ 0.51
SHMT2-206ENST00000553529 TRIM74Q86UV6 250 aa18.26■□□□□ 0.51
SHMT2-206ENST00000553529 ZSCAN30Q86W11 494 aa18.26■□□□□ 0.51
SHMT2-206ENST00000553529 ARRDC2Q8TBH0 407 aa18.26■□□□□ 0.51
SHMT2-206ENST00000553529 FAM174AQ8TBP5 190 aa18.26■□□□□ 0.51
SHMT2-206ENST00000553529 MAML1Q92585 1016 aa18.26■□□□□ 0.51
SHMT2-206ENST00000553529 DCBLD2Q96PD2 775 aa18.26■□□□□ 0.51
SHMT2-206ENST00000553529 AGAP2Q99490 1192 aa18.26■□□□□ 0.51
SHMT2-206ENST00000553529 BOCQ9BWV1 1114 aa18.26■□□□□ 0.51
SHMT2-206ENST00000553529 C1QTNF7Q9BXJ2 289 aa18.26■□□□□ 0.51
SHMT2-206ENST00000553529 SLC13A1Q9BZW2 595 aa18.26■□□□□ 0.51
SHMT2-206ENST00000553529 RBM22Q9NW64 420 aaKnown RBP eCLIP18.26■□□□□ 0.511e-9■■■■□ 20
SHMT2-206ENST00000553529 SAE1Q9UBE0 346 aaPredicted RBP18.26■□□□□ 0.51
SHMT2-206ENST00000553529 SPASTQ9UBP0 616 aa18.26■□□□□ 0.51
SHMT2-206ENST00000553529 KLQ9UEF7 1012 aa18.26■□□□□ 0.51
SHMT2-206ENST00000553529 CHKBQ9Y259 395 aa18.26■□□□□ 0.51
SHMT2-206ENST00000553529 GPSM3Q9Y4H4 160 aa18.26■□□□□ 0.51
SHMT2-206ENST00000553529 ADAMTS20P59510 1910 aa18.25■□□□□ 0.51
SHMT2-206ENST00000553529 FZD6O60353 706 aa18.25■□□□□ 0.51
SHMT2-206ENST00000553529 PRLP01236 227 aa18.25■□□□□ 0.51
SHMT2-206ENST00000553529 KRT1P04264 644 aa18.25■□□□□ 0.51
SHMT2-206ENST00000553529 MMP2P08253 660 aa18.25■□□□□ 0.51
SHMT2-206ENST00000553529 C1SP09871 688 aa18.25■□□□□ 0.51
SHMT2-206ENST00000553529 VIPR1P32241 457 aa18.25■□□□□ 0.51
SHMT2-206ENST00000553529 MAN1A1P33908 653 aa18.25■□□□□ 0.51
SHMT2-206ENST00000553529 HNF1BP35680 557 aa18.25■□□□□ 0.51
SHMT2-206ENST00000553529 SUOXP51687 545 aa18.25■□□□□ 0.51
SHMT2-206ENST00000553529 ADCY2Q08462 1091 aa18.25■□□□□ 0.51
SHMT2-206ENST00000553529 AGERQ15109 404 aa18.25■□□□□ 0.51
SHMT2-206ENST00000553529 COL28A1Q2UY09 1125 aa18.25■□□□□ 0.51
SHMT2-206ENST00000553529 CDCP2Q5VXM1 449 aa18.25■□□□□ 0.51
SHMT2-206ENST00000553529 ZCCHC8Q6NZY4 707 aaKnown RBP18.25■□□□□ 0.51
SHMT2-206ENST00000553529 CNTD1Q8N815 330 aa18.25■□□□□ 0.51
SHMT2-206ENST00000553529 PDCD7Q8N8D1 485 aaKnown RBP18.25■□□□□ 0.51
SHMT2-206ENST00000553529 DCBLD1Q8N8Z6 715 aa18.25■□□□□ 0.51
SHMT2-206ENST00000553529 FAM181AQ8N9Y4 354 aa18.25■□□□□ 0.51
SHMT2-206ENST00000553529 RFFLQ8WZ73 363 aa18.25■□□□□ 0.51
SHMT2-206ENST00000553529 NUS1Q96E22 293 aa18.25■□□□□ 0.51
SHMT2-206ENST00000553529 RNF157Q96PX1 679 aa18.25■□□□□ 0.51
SHMT2-206ENST00000553529 IL12RB2Q99665 862 aa18.25■□□□□ 0.51
SHMT2-206ENST00000553529 TRIM5Q9C035 493 aa18.25■□□□□ 0.51
SHMT2-206ENST00000553529 TMEM168Q9H0V1 697 aa18.25■□□□□ 0.51
SHMT2-206ENST00000553529 ZNHIT6Q9NWK9 470 aaKnown RBP18.25■□□□□ 0.51
SHMT2-206ENST00000553529 GULP1Q9UBP9 304 aa18.25■□□□□ 0.51
SHMT2-206ENST00000553529 PLEKHM1Q9Y4G2 1056 aa18.25■□□□□ 0.51
SHMT2-206ENST00000553529 HEY1Q9Y5J3 304 aa18.25■□□□□ 0.51
SHMT2-206ENST00000553529 ST14Q9Y5Y6 855 aa18.25■□□□□ 0.51
SHMT2-206ENST00000553529 ASXL3Q9C0F0 2248 aa18.25■□□□□ 0.51
SHMT2-206ENST00000553529 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.24■□□□□ 0.51
SHMT2-206ENST00000553529 GOLGA6CA6NDK9 693 aa18.24■□□□□ 0.51
SHMT2-206ENST00000553529 GOLGA6BA6NDN3 693 aa18.24■□□□□ 0.51
SHMT2-206ENST00000553529 NEMP2A6NFY4 417 aa18.24■□□□□ 0.51
SHMT2-206ENST00000553529 SOCS5O75159 536 aa18.24■□□□□ 0.51
SHMT2-206ENST00000553529 RASGRP1O95267 797 aa18.24■□□□□ 0.51
SHMT2-206ENST00000553529 SOD1P00441 154 aa18.24■□□□□ 0.51
SHMT2-206ENST00000553529 GOLGA6DP0CG33 693 aa18.24■□□□□ 0.51
SHMT2-206ENST00000553529 ALPPL2P10696 532 aa18.24■□□□□ 0.51
SHMT2-206ENST00000553529 KRT10P13645 584 aa18.24■□□□□ 0.51
SHMT2-206ENST00000553529 COMTP21964 271 aa18.24■□□□□ 0.51
SHMT2-206ENST00000553529 MTM1Q13496 603 aa18.24■□□□□ 0.51
SHMT2-206ENST00000553529 PDK2Q15119 407 aa18.24■□□□□ 0.51
SHMT2-206ENST00000553529 HS1BP3Q53T59 392 aa18.24■□□□□ 0.51
SHMT2-206ENST00000553529 C6orf132Q5T0Z8 1188 aa18.24■□□□□ 0.51
SHMT2-206ENST00000553529 ARMC12Q5T9G4 340 aa18.24■□□□□ 0.51
SHMT2-206ENST00000553529 LRRC66Q68CR7 880 aa18.24■□□□□ 0.51
SHMT2-206ENST00000553529 PNCKQ6P2M8 343 aa18.24■□□□□ 0.51
SHMT2-206ENST00000553529 MFSD7Q6UXD7 560 aa18.24■□□□□ 0.51
SHMT2-206ENST00000553529 WDR92Q96MX6 357 aa18.24■□□□□ 0.51
SHMT2-206ENST00000553529 GOLGA6AQ9NYA3 693 aa18.24■□□□□ 0.51
SHMT2-206ENST00000553529 MOSPD1Q9UJG1 213 aa18.24■□□□□ 0.51
SHMT2-206ENST00000553529 SALL4Q9UJQ4 1053 aa18.24■□□□□ 0.51
SHMT2-206ENST00000553529 PCYT1BQ9Y5K3 369 aaPredicted RBP18.24■□□□□ 0.51
SHMT2-206ENST00000553529 CSNK1G3Q9Y6M4 447 aa18.24■□□□□ 0.51
SHMT2-206ENST00000553529 RCCD1A6NED2 376 aa18.23■□□□□ 0.51
SHMT2-206ENST00000553529 LMO7DNF2Z398 122 aa18.23■□□□□ 0.51
SHMT2-206ENST00000553529 F5H423 210 aaPredicted RBP18.23■□□□□ 0.51
SHMT2-206ENST00000553529 MATN3O15232 486 aa18.23■□□□□ 0.51
SHMT2-206ENST00000553529 BRINP1O60477 761 aa18.23■□□□□ 0.51
SHMT2-206ENST00000553529 CSO75390 466 aaKnown RBP18.23■□□□□ 0.51
SHMT2-206ENST00000553529 MTA2O94776 668 aa18.23■□□□□ 0.51
SHMT2-206ENST00000553529 JCHAINP01591 159 aa18.23■□□□□ 0.51
SHMT2-206ENST00000553529 MPOP05164 745 aa18.23■□□□□ 0.51
SHMT2-206ENST00000553529 ANXA6P08133 673 aa18.23■□□□□ 0.51
SHMT2-206ENST00000553529 KRT7P08729 469 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms