RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 MMP8P22894 467 aa9.11□□□□□ -0.95
SYNE2-209ENST00000553308 KELP23276 732 aa9.11□□□□□ -0.95
SYNE2-209ENST00000553308 CSF2RBP32927 897 aa9.11□□□□□ -0.95
SYNE2-209ENST00000553308 UGT1A3P35503 534 aa9.11□□□□□ -0.95
SYNE2-209ENST00000553308 CASRP41180 1078 aa9.11□□□□□ -0.95
SYNE2-209ENST00000553308 YBEYP58557 167 aaPredicted RBP9.11□□□□□ -0.95
SYNE2-209ENST00000553308 GRM3Q14832 879 aa9.11□□□□□ -0.95
SYNE2-209ENST00000553308 NR1D2Q14995 579 aa9.11□□□□□ -0.95
SYNE2-209ENST00000553308 PARP15Q460N3 678 aa9.11□□□□□ -0.95
SYNE2-209ENST00000553308 VWA3BQ502W6 1294 aa9.11□□□□□ -0.95
SYNE2-209ENST00000553308 HSP90AA4PQ58FG1 418 aa9.11□□□□□ -0.95
SYNE2-209ENST00000553308 CLEC18BQ6UXF7 455 aa9.11□□□□□ -0.95
SYNE2-209ENST00000553308 LIPIQ6XZB0 460 aa9.11□□□□□ -0.95
SYNE2-209ENST00000553308 SLFN11Q7Z7L1 901 aa9.11□□□□□ -0.95
SYNE2-209ENST00000553308 C17orf82Q86X59 251 aaPredicted RBP9.11□□□□□ -0.95
SYNE2-209ENST00000553308 NRROSQ86YC3 692 aa9.11□□□□□ -0.95
SYNE2-209ENST00000553308 CLEC18CQ8NCF0 446 aa9.11□□□□□ -0.95
SYNE2-209ENST00000553308 ZDHHC1Q8WTX9 485 aa9.11□□□□□ -0.95
SYNE2-209ENST00000553308 PATE1Q8WXA2 126 aa9.11□□□□□ -0.95
SYNE2-209ENST00000553308 ART4Q93070 314 aa9.11□□□□□ -0.95
SYNE2-209ENST00000553308 ZNF641Q96N77 438 aaPredicted RBP9.11□□□□□ -0.95
SYNE2-209ENST00000553308 TAAR9Q96RI9 348 aa9.11□□□□□ -0.95
SYNE2-209ENST00000553308 TUBGCP5Q96RT8 1024 aa9.11□□□□□ -0.95
SYNE2-209ENST00000553308 NAA15Q9BXJ9 866 aaKnown RBP9.11□□□□□ -0.95
SYNE2-209ENST00000553308 WDR26Q9H7D7 661 aa9.11□□□□□ -0.95
SYNE2-209ENST00000553308 CARS2Q9HA77 564 aaKnown RBP9.11□□□□□ -0.95
SYNE2-209ENST00000553308 TUBD1Q9UJT1 453 aa9.11□□□□□ -0.95
SYNE2-209ENST00000553308 NOCTQ9UK39 431 aaKnown RBP9.11□□□□□ -0.95
SYNE2-209ENST00000553308 PCDHGA3Q9Y5H0 932 aa9.11□□□□□ -0.95
SYNE2-209ENST00000553308 ARHGEF17Q96PE2 2063 aaPredicted RBP9.1□□□□□ -0.95
SYNE2-209ENST00000553308 CFAP69A5D8W1 941 aa9.1□□□□□ -0.95
SYNE2-209ENST00000553308 A8MX80 341 aa9.1□□□□□ -0.95
SYNE2-209ENST00000553308 TEX33O43247 280 aa9.1□□□□□ -0.95
SYNE2-209ENST00000553308 DUX1O43812 170 aa9.1□□□□□ -0.95
SYNE2-209ENST00000553308 RAD1O60671 282 aa9.1□□□□□ -0.95
SYNE2-209ENST00000553308 GFPT2O94808 682 aa9.1□□□□□ -0.95
SYNE2-209ENST00000553308 ECEL1O95672 775 aa9.1□□□□□ -0.95
SYNE2-209ENST00000553308 FUCA1P04066 466 aa9.1□□□□□ -0.95
SYNE2-209ENST00000553308 FGF1P05230 155 aa9.1□□□□□ -0.95
SYNE2-209ENST00000553308 HOXC4P09017 264 aaPredicted RBP9.1□□□□□ -0.95
SYNE2-209ENST00000553308 CHRNB2P17787 502 aa9.1□□□□□ -0.95
SYNE2-209ENST00000553308 MPSTP25325 297 aa9.1□□□□□ -0.95
SYNE2-209ENST00000553308 AK4P27144 223 aaPredicted RBP9.1□□□□□ -0.95
SYNE2-209ENST00000553308 CD1CP29017 333 aa9.1□□□□□ -0.95
SYNE2-209ENST00000553308 SERPINA4P29622 427 aa9.1□□□□□ -0.95
SYNE2-209ENST00000553308 RFC1P35251 1148 aaPredicted RBP9.1□□□□□ -0.95
SYNE2-209ENST00000553308 TRIM23P36406 574 aa9.1□□□□□ -0.95
SYNE2-209ENST00000553308 STAT1P42224 750 aa9.1□□□□□ -0.95
SYNE2-209ENST00000553308 CCR10P46092 362 aa9.1□□□□□ -0.95
SYNE2-209ENST00000553308 LIMK2P53671 638 aa9.1□□□□□ -0.95
SYNE2-209ENST00000553308 FMO1Q01740 532 aa9.1□□□□□ -0.95
SYNE2-209ENST00000553308 PTP4A2Q12974 167 aa9.1□□□□□ -0.95
SYNE2-209ENST00000553308 CAMK4Q16566 473 aa9.1□□□□□ -0.95
SYNE2-209ENST00000553308 TPD52L1Q16890 204 aaPredicted RBP9.1□□□□□ -0.95
SYNE2-209ENST00000553308 NKAIN2Q5VXU1 208 aa9.1□□□□□ -0.95
SYNE2-209ENST00000553308 PNCKQ6P2M8 343 aa9.1□□□□□ -0.95
SYNE2-209ENST00000553308 SLC30A9Q6PML9 568 aa9.1□□□□□ -0.95
SYNE2-209ENST00000553308 CACNA2D3Q8IZS8 1091 aa9.1□□□□□ -0.95
SYNE2-209ENST00000553308 UMODL1-AS1Q8N2C9 162 aa9.1□□□□□ -0.95
SYNE2-209ENST00000553308 TSEN2Q8NCE0 465 aaKnown RBP9.1□□□□□ -0.95
SYNE2-209ENST00000553308 GPBAR1Q8TDU6 330 aa9.1□□□□□ -0.95
SYNE2-209ENST00000553308 PTCD2Q8WV60 388 aaKnown RBP9.1□□□□□ -0.95
SYNE2-209ENST00000553308 CELF6Q96J87 481 aaKnown RBP9.1□□□□□ -0.95
SYNE2-209ENST00000553308 TUBGCP2Q9BSJ2 902 aa9.1□□□□□ -0.95
SYNE2-209ENST00000553308 CDH19Q9H159 772 aa9.1□□□□□ -0.95
SYNE2-209ENST00000553308 ZNF71Q9NQZ8 489 aaPredicted RBP9.1□□□□□ -0.95
SYNE2-209ENST00000553308 TMEM9Q9P0T7 183 aa9.1□□□□□ -0.95
SYNE2-209ENST00000553308 TAAR2Q9P1P5 351 aa9.1□□□□□ -0.95
SYNE2-209ENST00000553308 KIAA1468Q9P260 1216 aa9.1□□□□□ -0.95
SYNE2-209ENST00000553308 MAN2B2Q9Y2E5 1009 aa9.1□□□□□ -0.95
SYNE2-209ENST00000553308 ST14Q9Y5Y6 855 aa9.1□□□□□ -0.95
SYNE2-209ENST00000553308 BSNQ9UPA5 3926 aa9.1□□□□□ -0.95
SYNE2-209ENST00000553308 ZNF891A8MT65 544 aaPredicted RBP9.09□□□□□ -0.95
SYNE2-209ENST00000553308 WASH4PA8MWX3 477 aa9.09□□□□□ -0.95
SYNE2-209ENST00000553308 PES1O00541 588 aaKnown RBP9.09□□□□□ -0.95
SYNE2-209ENST00000553308 PPM1DO15297 605 aa9.09□□□□□ -0.95
SYNE2-209ENST00000553308 NKX2-8O15522 239 aa9.09□□□□□ -0.95
SYNE2-209ENST00000553308 CCP110O43303 1012 aa9.09□□□□□ -0.95
SYNE2-209ENST00000553308 PRAMEF11O60813 436 aa9.09□□□□□ -0.95
SYNE2-209ENST00000553308 CEACAM5P06731 702 aa9.09□□□□□ -0.95
SYNE2-209ENST00000553308 PRKAR1AP10644 381 aa9.09□□□□□ -0.95
SYNE2-209ENST00000553308 THRAP10827 490 aa9.09□□□□□ -0.95
SYNE2-209ENST00000553308 KRT3P12035 628 aa9.09□□□□□ -0.95
SYNE2-209ENST00000553308 MYCLP1P12525 358 aaPredicted RBP9.09□□□□□ -0.95
SYNE2-209ENST00000553308 GPD1P21695 349 aa9.09□□□□□ -0.95
SYNE2-209ENST00000553308 GNPDA1P46926 289 aa9.09□□□□□ -0.95
SYNE2-209ENST00000553308 CDR2Q01850 454 aa9.09□□□□□ -0.95
SYNE2-209ENST00000553308 ILF3Q12906 894 aaKnown RBP eCLIP9.09□□□□□ -0.95
SYNE2-209ENST00000553308 BIRC2Q13490 618 aa9.09□□□□□ -0.95
SYNE2-209ENST00000553308 TRA2AQ13595 282 aaKnown RBP eCLIP9.09□□□□□ -0.95
SYNE2-209ENST00000553308 ACOX1Q15067 660 aa9.09□□□□□ -0.95
SYNE2-209ENST00000553308 CLPPQ16740 277 aaPredicted RBP9.09□□□□□ -0.95
SYNE2-209ENST00000553308 TSR1Q2NL82 804 aaKnown RBP9.09□□□□□ -0.95
SYNE2-209ENST00000553308 AFMIDQ63HM1 303 aa9.09□□□□□ -0.95
SYNE2-209ENST00000553308 ANKS6Q68DC2 871 aa9.09□□□□□ -0.95
SYNE2-209ENST00000553308 SCYL2Q6P3W7 929 aa9.09□□□□□ -0.95
SYNE2-209ENST00000553308 WDR59Q6PJI9 974 aa9.09□□□□□ -0.95
SYNE2-209ENST00000553308 DPPA4Q7L190 304 aa9.09□□□□□ -0.95
SYNE2-209ENST00000553308 SRLQ86TD4 932 aa9.09□□□□□ -0.95
SYNE2-209ENST00000553308 HEATR4Q86WZ0 1026 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms