RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 SP3Q02447 781 aa12.4□□□□□ -0.42
HDAC7-230ENST00000552960 RPS6KA2Q15349 733 aa12.4□□□□□ -0.42
HDAC7-230ENST00000552960 DCAF4L1Q3SXM0 396 aa12.4□□□□□ -0.42
HDAC7-230ENST00000552960 RBM20Q5T481 1227 aaKnown RBP12.4□□□□□ -0.42
HDAC7-230ENST00000552960 LRRC43Q8N309 656 aa12.4□□□□□ -0.42
HDAC7-230ENST00000552960 NAT16Q8N8M0 369 aa12.4□□□□□ -0.42
HDAC7-230ENST00000552960 DDHD1Q8NEL9 900 aa12.4□□□□□ -0.42
HDAC7-230ENST00000552960 BEST2Q8NFU1 509 aa12.4□□□□□ -0.42
HDAC7-230ENST00000552960 MTG1Q9BT17 334 aaPredicted RBP12.4□□□□□ -0.42
HDAC7-230ENST00000552960 CNOT11Q9UKZ1 510 aaKnown RBP12.4□□□□□ -0.42
HDAC7-230ENST00000552960 C1orf232A0A0U1RR37 186 aa12.4□□□□□ -0.42
HDAC7-230ENST00000552960 F8W810 466 aa12.4□□□□□ -0.42
HDAC7-230ENST00000552960 CCL22O00626 93 aa12.4□□□□□ -0.42
HDAC7-230ENST00000552960 ZNF182P17025 639 aaPredicted RBP12.4□□□□□ -0.42
HDAC7-230ENST00000552960 IL10P22301 178 aa12.4□□□□□ -0.42
HDAC7-230ENST00000552960 UGT1A1P22309 533 aa12.4□□□□□ -0.42
HDAC7-230ENST00000552960 UGT1A4P22310 534 aa12.4□□□□□ -0.42
HDAC7-230ENST00000552960 MAP4P27816 1152 aaKnown RBP12.4□□□□□ -0.42
HDAC7-230ENST00000552960 CD52P31358 61 aa12.4□□□□□ -0.42
HDAC7-230ENST00000552960 ADRA1BP35368 520 aa12.4□□□□□ -0.42
HDAC7-230ENST00000552960 UGT1A3P35503 534 aa12.4□□□□□ -0.42
HDAC7-230ENST00000552960 UGT1A5P35504 534 aa12.4□□□□□ -0.42
HDAC7-230ENST00000552960 NPY2RP49146 381 aa12.4□□□□□ -0.42
HDAC7-230ENST00000552960 ZIK1Q3SY52 487 aaPredicted RBP12.4□□□□□ -0.42
HDAC7-230ENST00000552960 ZBED5Q49AG3 693 aa12.4□□□□□ -0.42
HDAC7-230ENST00000552960 LDLRAP1Q5SW96 308 aa12.4□□□□□ -0.42
HDAC7-230ENST00000552960 OTUD3Q5T2D3 398 aaPredicted RBP12.4□□□□□ -0.42
HDAC7-230ENST00000552960 NCCRP1Q6ZVX7 275 aaPredicted RBP12.4□□□□□ -0.42
HDAC7-230ENST00000552960 PIWIL4Q7Z3Z4 852 aaKnown RBP12.4□□□□□ -0.42
HDAC7-230ENST00000552960 LDB1Q86U70 411 aaPredicted RBP12.4□□□□□ -0.42
HDAC7-230ENST00000552960 OR2T34Q8NGX1 318 aa12.4□□□□□ -0.42
HDAC7-230ENST00000552960 OR2T3Q8NH03 318 aa12.4□□□□□ -0.42
HDAC7-230ENST00000552960 TFAP2CQ92754 450 aa12.4□□□□□ -0.42
HDAC7-230ENST00000552960 GAD1Q99259 594 aa12.4□□□□□ -0.42
HDAC7-230ENST00000552960 SEPHS2Q99611 448 aa12.4□□□□□ -0.42
HDAC7-230ENST00000552960 FICDQ9BVA6 458 aa12.4□□□□□ -0.42
HDAC7-230ENST00000552960 ANKRD60Q9BZ19 345 aa12.4□□□□□ -0.42
HDAC7-230ENST00000552960 MUC3BQ9H195 1237 aa12.4□□□□□ -0.42
HDAC7-230ENST00000552960 GBA3Q9H227 469 aa12.4□□□□□ -0.42
HDAC7-230ENST00000552960 DHRS12A0PJE2 317 aa12.39□□□□□ -0.43
HDAC7-230ENST00000552960 MAGEB16A2A368 324 aa12.39□□□□□ -0.43
HDAC7-230ENST00000552960 SLC22A2O15244 555 aa12.39□□□□□ -0.43
HDAC7-230ENST00000552960 MTHFD1P11586 935 aaKnown RBP12.39□□□□□ -0.43
HDAC7-230ENST00000552960 CES1P23141 567 aa12.39□□□□□ -0.43
HDAC7-230ENST00000552960 NOS2P35228 1153 aa12.39□□□□□ -0.43
HDAC7-230ENST00000552960 SLC1A2P43004 574 aa12.39□□□□□ -0.43
HDAC7-230ENST00000552960 ACADSBP45954 432 aa12.39□□□□□ -0.43
HDAC7-230ENST00000552960 RXRGP48443 463 aa12.39□□□□□ -0.43
HDAC7-230ENST00000552960 TKTL1P51854 596 aa12.39□□□□□ -0.43
HDAC7-230ENST00000552960 MERTKQ12866 999 aa12.39□□□□□ -0.43
HDAC7-230ENST00000552960 SQLEQ14534 574 aa12.39□□□□□ -0.43
HDAC7-230ENST00000552960 FBXO48Q5FWF7 155 aa12.39□□□□□ -0.43
HDAC7-230ENST00000552960 NOMO2Q5JPE7 1267 aa12.39□□□□□ -0.43
HDAC7-230ENST00000552960 AARS2Q5JTZ9 985 aaKnown RBP12.39□□□□□ -0.43
HDAC7-230ENST00000552960 FBXO47Q5MNV8 452 aa12.39□□□□□ -0.43
HDAC7-230ENST00000552960 C6orf10Q5SRN2 563 aa12.39□□□□□ -0.43
HDAC7-230ENST00000552960 NAPEPLDQ6IQ20 393 aa12.39□□□□□ -0.43
HDAC7-230ENST00000552960 CAMK1DQ8IU85 385 aa12.39□□□□□ -0.43
HDAC7-230ENST00000552960 DDIASQ8IXT1 998 aa12.39□□□□□ -0.43
HDAC7-230ENST00000552960 SLC25A23Q9BV35 468 aa12.39□□□□□ -0.43
HDAC7-230ENST00000552960 PLEKHA5Q9HAU0 1116 aa12.39□□□□□ -0.43
HDAC7-230ENST00000552960 UTP6Q9NYH9 597 aaKnown RBP12.39□□□□□ -0.43
HDAC7-230ENST00000552960 EI24O14681 340 aa12.39□□□□□ -0.43
HDAC7-230ENST00000552960 DCLK1O15075 740 aa12.39□□□□□ -0.43
HDAC7-230ENST00000552960 SLC4A1P02730 911 aa12.39□□□□□ -0.43
HDAC7-230ENST00000552960 NCK1P16333 377 aa12.39□□□□□ -0.43
HDAC7-230ENST00000552960 ATP5F1P24539 256 aaPredicted RBP12.39□□□□□ -0.43
HDAC7-230ENST00000552960 PHEXP78562 749 aa12.39□□□□□ -0.43
HDAC7-230ENST00000552960 MRPS6P82932 125 aaKnown RBP12.39□□□□□ -0.43
HDAC7-230ENST00000552960 GNA12Q03113 381 aa12.39□□□□□ -0.43
HDAC7-230ENST00000552960 DEFB115Q30KQ5 88 aa12.39□□□□□ -0.43
HDAC7-230ENST00000552960 ZNF789Q5FWF6 425 aa12.39□□□□□ -0.43
HDAC7-230ENST00000552960 APPL2Q8NEU8 664 aa12.39□□□□□ -0.43
HDAC7-230ENST00000552960 VPS45Q9NRW7 570 aa12.39□□□□□ -0.43
HDAC7-230ENST00000552960 INIPQ9NRY2 104 aa12.39□□□□□ -0.43
HDAC7-230ENST00000552960 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.39□□□□□ -0.43
HDAC7-230ENST00000552960 TRIM24O15164 1050 aa12.39□□□□□ -0.43
HDAC7-230ENST00000552960 B4GAT1O43505 415 aa12.39□□□□□ -0.43
HDAC7-230ENST00000552960 COL6A2P12110 1019 aa12.39□□□□□ -0.43
HDAC7-230ENST00000552960 CHRNA4P43681 627 aa12.39□□□□□ -0.43
HDAC7-230ENST00000552960 ITGADQ13349 1161 aa12.39□□□□□ -0.43
HDAC7-230ENST00000552960 PAFAH1B3Q15102 231 aaKnown RBP12.39□□□□□ -0.43
HDAC7-230ENST00000552960 CYP51A1Q16850 503 aa12.39□□□□□ -0.43
HDAC7-230ENST00000552960 UGP2Q16851 508 aa12.39□□□□□ -0.43
HDAC7-230ENST00000552960 Q6ZNX1 250 aa12.39□□□□□ -0.43
HDAC7-230ENST00000552960 ARHGAP36Q6ZRI8 547 aa12.39□□□□□ -0.43
HDAC7-230ENST00000552960 C3orf58Q8NDZ4 430 aa12.39□□□□□ -0.43
HDAC7-230ENST00000552960 DNAJB14Q8TBM8 379 aa12.39□□□□□ -0.43
HDAC7-230ENST00000552960 HM13Q8TCT9 377 aa12.39□□□□□ -0.43
HDAC7-230ENST00000552960 HASPINQ8TF76 798 aa12.39□□□□□ -0.43
HDAC7-230ENST00000552960 HDAC11Q96DB2 347 aa12.39□□□□□ -0.43
HDAC7-230ENST00000552960 VPS50Q96JG6 964 aa12.39□□□□□ -0.43
HDAC7-230ENST00000552960 BIRC8Q96P09 236 aa12.39□□□□□ -0.43
HDAC7-230ENST00000552960 KATNAL1Q9BW62 490 aa12.39□□□□□ -0.43
HDAC7-230ENST00000552960 COQ6Q9Y2Z9 468 aa12.39□□□□□ -0.43
HDAC7-230ENST00000552960 Q9Y3F1 56 aa12.39□□□□□ -0.43
HDAC7-230ENST00000552960 TCRBV3S1A0A5B6 114 aa12.38□□□□□ -0.43
HDAC7-230ENST00000552960 H3BMQ9 156 aa12.38□□□□□ -0.43
HDAC7-230ENST00000552960 I6L893 689 aaPredicted RBP12.38□□□□□ -0.43
HDAC7-230ENST00000552960 ANGPT2O15123 496 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms