RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 INHBCP55103 352 aa11.92□□□□□ -0.5
CKAP4-202ENST00000552828 RPL7AP62424 266 aaKnown RBP11.92□□□□□ -0.5
CKAP4-202ENST00000552828 ZFP36L1Q07352 338 aaKnown RBP11.92□□□□□ -0.5
CKAP4-202ENST00000552828 MTM1Q13496 603 aa11.92□□□□□ -0.5
CKAP4-202ENST00000552828 EFHC2Q5JST6 749 aa11.92□□□□□ -0.5
CKAP4-202ENST00000552828 PPP1R15BQ5SWA1 713 aa11.92□□□□□ -0.5
CKAP4-202ENST00000552828 CCDC122Q5T0U0 273 aa11.92□□□□□ -0.5
CKAP4-202ENST00000552828 ALKBH5Q6P6C2 394 aaKnown RBP11.92□□□□□ -0.5
CKAP4-202ENST00000552828 ENPP7Q6UWV6 458 aa11.92□□□□□ -0.5
CKAP4-202ENST00000552828 NYAP1Q6ZVC0 841 aa11.92□□□□□ -0.5
CKAP4-202ENST00000552828 EXD3Q8N9H8 876 aa11.92□□□□□ -0.5
CKAP4-202ENST00000552828 NETO2Q8NC67 525 aa11.92□□□□□ -0.5
CKAP4-202ENST00000552828 ATL2Q8NHH9 583 aa11.92□□□□□ -0.5
CKAP4-202ENST00000552828 TMEM159Q96B96 161 aa11.92□□□□□ -0.5
CKAP4-202ENST00000552828 ZNF653Q96CK0 615 aa11.92□□□□□ -0.5
CKAP4-202ENST00000552828 CCDC42Q96M95 316 aa11.92□□□□□ -0.5
CKAP4-202ENST00000552828 WDR92Q96MX6 357 aa11.92□□□□□ -0.5
CKAP4-202ENST00000552828 TMEM74Q96NL1 305 aa11.92□□□□□ -0.5
CKAP4-202ENST00000552828 MCEEQ96PE7 176 aa11.92□□□□□ -0.5
CKAP4-202ENST00000552828 TUBGCP5Q96RT8 1024 aa11.92□□□□□ -0.5
CKAP4-202ENST00000552828 FOXP3Q9BZS1 431 aa11.92□□□□□ -0.5
CKAP4-202ENST00000552828 LRRN3Q9H3W5 708 aa11.92□□□□□ -0.5
CKAP4-202ENST00000552828 CLMPQ9H6B4 373 aa11.92□□□□□ -0.5
CKAP4-202ENST00000552828 LRRC19Q9H756 370 aa11.92□□□□□ -0.5
CKAP4-202ENST00000552828 PDFQ9HBH1 243 aa11.92□□□□□ -0.5
CKAP4-202ENST00000552828 EPB41L5Q9HCM4 733 aa11.92□□□□□ -0.5
CKAP4-202ENST00000552828 MRPL47Q9HD33 250 aaKnown RBP11.92□□□□□ -0.5
CKAP4-202ENST00000552828 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.92□□□□□ -0.5
CKAP4-202ENST00000552828 SIRPGQ9P1W8 387 aa11.92□□□□□ -0.5
CKAP4-202ENST00000552828 COQ6Q9Y2Z9 468 aa11.92□□□□□ -0.5
CKAP4-202ENST00000552828 OR1A2Q9Y585 309 aa11.92□□□□□ -0.5
CKAP4-202ENST00000552828 SCINQ9Y6U3 715 aa11.92□□□□□ -0.5
CKAP4-202ENST00000552828 AHCTF1Q8WYP5 2266 aa11.91□□□□□ -0.5
CKAP4-202ENST00000552828 TNFRSF10CO14798 259 aa11.91□□□□□ -0.5
CKAP4-202ENST00000552828 FGF10O15520 208 aaPredicted RBP11.91□□□□□ -0.5
CKAP4-202ENST00000552828 ATMINO43313 823 aaPredicted RBP11.91□□□□□ -0.5
CKAP4-202ENST00000552828 PIGNO95427 931 aa11.91□□□□□ -0.5
CKAP4-202ENST00000552828 ITGB2P05107 769 aa11.91□□□□□ -0.5
CKAP4-202ENST00000552828 GLB1P16278 677 aa11.91□□□□□ -0.5
CKAP4-202ENST00000552828 XPAP23025 273 aaPredicted RBP11.91□□□□□ -0.5
CKAP4-202ENST00000552828 HTR7P34969 479 aa11.91□□□□□ -0.5
CKAP4-202ENST00000552828 KIAA1024LP59773 190 aa11.91□□□□□ -0.5
CKAP4-202ENST00000552828 KCNC4Q03721 635 aa11.91□□□□□ -0.5
CKAP4-202ENST00000552828 SLC18A3Q16572 532 aa11.91□□□□□ -0.5
CKAP4-202ENST00000552828 LINC00303Q3SY05 128 aa11.91□□□□□ -0.5
CKAP4-202ENST00000552828 CERCAMQ5T4B2 595 aa11.91□□□□□ -0.5
CKAP4-202ENST00000552828 KCTD16Q68DU8 428 aa11.91□□□□□ -0.5
CKAP4-202ENST00000552828 ERAP2Q6P179 960 aa11.91□□□□□ -0.5
CKAP4-202ENST00000552828 RD3Q7Z3Z2 195 aa11.91□□□□□ -0.5
CKAP4-202ENST00000552828 ZNF354CQ86Y25 554 aa11.91□□□□□ -0.5
CKAP4-202ENST00000552828 EXOC2Q96KP1 924 aa11.91□□□□□ -0.5
CKAP4-202ENST00000552828 CHP1Q99653 195 aa11.91□□□□□ -0.5
CKAP4-202ENST00000552828 CNPY3Q9BT09 278 aa11.91□□□□□ -0.5
CKAP4-202ENST00000552828 CATSPERBQ9H7T0 1116 aa11.91□□□□□ -0.5
CKAP4-202ENST00000552828 SYNDIG1Q9H7V2 258 aa11.91□□□□□ -0.5
CKAP4-202ENST00000552828 NHEJ1Q9H9Q4 299 aaPredicted RBP11.91□□□□□ -0.5
CKAP4-202ENST00000552828 DONSONQ9NYP3 566 aa11.91□□□□□ -0.5
CKAP4-202ENST00000552828 MYO1AQ9UBC5 1043 aa11.91□□□□□ -0.5
CKAP4-202ENST00000552828 UBA2Q9UBT2 640 aaPredicted RBP11.91□□□□□ -0.5
CKAP4-202ENST00000552828 KLQ9UEF7 1012 aa11.91□□□□□ -0.5
CKAP4-202ENST00000552828 FZD10Q9ULW2 581 aa11.91□□□□□ -0.5
CKAP4-202ENST00000552828 ATP8A1Q9Y2Q0 1164 aa11.91□□□□□ -0.5
CKAP4-202ENST00000552828 TMEM191CA6NGB0 347 aa11.9□□□□□ -0.5
CKAP4-202ENST00000552828 CCP110O43303 1012 aa11.9□□□□□ -0.5
CKAP4-202ENST00000552828 SLC28A2O43868 658 aa11.9□□□□□ -0.5
CKAP4-202ENST00000552828 PRAMEF11O60813 436 aa11.9□□□□□ -0.5
CKAP4-202ENST00000552828 WISP1O95388 367 aa11.9□□□□□ -0.5
CKAP4-202ENST00000552828 TNFP01375 233 aa11.9□□□□□ -0.5
CKAP4-202ENST00000552828 LIPCP11150 499 aa11.9□□□□□ -0.5
CKAP4-202ENST00000552828 HGFP14210 728 aa11.9□□□□□ -0.5
CKAP4-202ENST00000552828 PSMA2P25787 234 aa11.9□□□□□ -0.5
CKAP4-202ENST00000552828 TRIM23P36406 574 aa11.9□□□□□ -0.5
CKAP4-202ENST00000552828 NDST2P52849 883 aa11.9□□□□□ -0.5
CKAP4-202ENST00000552828 ASTE1Q2TB18 679 aaPredicted RBP11.9□□□□□ -0.5
CKAP4-202ENST00000552828 ZSWIM9Q86XI8 627 aa11.9□□□□□ -0.5
CKAP4-202ENST00000552828 CAMK1DQ8IU85 385 aa11.9□□□□□ -0.5
CKAP4-202ENST00000552828 CCNJLQ8IV13 435 aa11.9□□□□□ -0.5
CKAP4-202ENST00000552828 NAV2Q8IVL1 2488 aa11.9□□□□□ -0.5
CKAP4-202ENST00000552828 TC2NQ8N9U0 490 aa11.9□□□□□ -0.5
CKAP4-202ENST00000552828 PLA2G15Q8NCC3 412 aa11.9□□□□□ -0.5
CKAP4-202ENST00000552828 OR1E3Q8WZA6 343 aa11.9□□□□□ -0.5
CKAP4-202ENST00000552828 FUBP1Q96AE4 644 aaKnown RBP11.9□□□□□ -0.5
CKAP4-202ENST00000552828 ECHDC3Q96DC8 303 aa11.9□□□□□ -0.5
CKAP4-202ENST00000552828 SGF29Q96ES7 293 aa11.9□□□□□ -0.5
CKAP4-202ENST00000552828 PDXPQ96GD0 296 aa11.9□□□□□ -0.5
CKAP4-202ENST00000552828 NCAPGQ9BPX3 1015 aa11.9□□□□□ -0.5
CKAP4-202ENST00000552828 B3GNT4Q9C0J1 378 aa11.9□□□□□ -0.5
CKAP4-202ENST00000552828 LOXL2Q9Y4K0 774 aa11.9□□□□□ -0.5
CKAP4-202ENST00000552828 KIF26BQ2KJY2 2108 aa11.89□□□□□ -0.51
CKAP4-202ENST00000552828 TMEM202A6NGA9 273 aa11.89□□□□□ -0.51
CKAP4-202ENST00000552828 J3KR12 359 aa11.89□□□□□ -0.51
CKAP4-202ENST00000552828 NUDT21O43809 227 aaKnown RBP11.89□□□□□ -0.51
CKAP4-202ENST00000552828 CREB3O43889 395 aa11.89□□□□□ -0.51
CKAP4-202ENST00000552828 PCCBP05166 539 aa11.89□□□□□ -0.51
CKAP4-202ENST00000552828 JMJD7P0C870 316 aa11.89□□□□□ -0.51
CKAP4-202ENST00000552828 CDC25BP30305 580 aa11.89□□□□□ -0.51
CKAP4-202ENST00000552828 NSUN2Q08J23 767 aaKnown RBP eCLIP11.89□□□□□ -0.51
CKAP4-202ENST00000552828 RALGDSQ12967 914 aa11.89□□□□□ -0.51
CKAP4-202ENST00000552828 HLTFQ14527 1009 aaKnown RBP eCLIP11.89□□□□□ -0.51
CKAP4-202ENST00000552828 TGIF1Q15583 401 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms