RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 SLC35G2Q8TBE7 412 aa13.07□□□□□ -0.32
NPAS3-209ENST00000551008 ARRDC2Q8TBH0 407 aa13.07□□□□□ -0.32
NPAS3-209ENST00000551008 PIH1D2Q8WWB5 315 aa13.07□□□□□ -0.32
NPAS3-209ENST00000551008 TSGA13Q96PP4 275 aa13.07□□□□□ -0.32
NPAS3-209ENST00000551008 MCCC1Q96RQ3 725 aaPredicted RBP13.07□□□□□ -0.32
NPAS3-209ENST00000551008 LGR4Q9BXB1 951 aa13.07□□□□□ -0.32
NPAS3-209ENST00000551008 NT5MQ9NPB1 228 aa13.07□□□□□ -0.32
NPAS3-209ENST00000551008 SCUBE2Q9NQ36 999 aa13.07□□□□□ -0.32
NPAS3-209ENST00000551008 DTLQ9NZJ0 730 aa13.07□□□□□ -0.32
NPAS3-209ENST00000551008 SALL4Q9UJQ4 1053 aa13.07□□□□□ -0.32
NPAS3-209ENST00000551008 PPIL1Q9Y3C6 166 aa13.07□□□□□ -0.32
NPAS3-209ENST00000551008 PCDHB1Q9Y5F3 818 aa13.07□□□□□ -0.32
NPAS3-209ENST00000551008 NEMP2A6NFY4 417 aa13.06□□□□□ -0.32
NPAS3-209ENST00000551008 YY2O15391 372 aa13.06□□□□□ -0.32
NPAS3-209ENST00000551008 TLX3O43711 291 aaPredicted RBP13.06□□□□□ -0.32
NPAS3-209ENST00000551008 PRLP01236 227 aa13.06□□□□□ -0.32
NPAS3-209ENST00000551008 FUCA1P04066 466 aa13.06□□□□□ -0.32
NPAS3-209ENST00000551008 ELFN1P0C7U0 828 aa13.06□□□□□ -0.32
NPAS3-209ENST00000551008 ALPPL2P10696 532 aa13.06□□□□□ -0.32
NPAS3-209ENST00000551008 TGM2P21980 687 aa13.06□□□□□ -0.32
NPAS3-209ENST00000551008 KDELR1P24390 212 aa13.06□□□□□ -0.32
NPAS3-209ENST00000551008 VIPR1P32241 457 aa13.06□□□□□ -0.32
NPAS3-209ENST00000551008 TRIM23P36406 574 aa13.06□□□□□ -0.32
NPAS3-209ENST00000551008 KIAA1024LP59773 190 aa13.06□□□□□ -0.32
NPAS3-209ENST00000551008 DSC2Q02487 901 aa13.06□□□□□ -0.32
NPAS3-209ENST00000551008 PPARDQ03181 441 aa13.06□□□□□ -0.32
NPAS3-209ENST00000551008 NIPAL4Q0D2K0 466 aa13.06□□□□□ -0.32
NPAS3-209ENST00000551008 PTK2BQ14289 1009 aa13.06□□□□□ -0.32
NPAS3-209ENST00000551008 MESDQ14696 234 aa13.06□□□□□ -0.32
NPAS3-209ENST00000551008 PDK2Q15119 407 aa13.06□□□□□ -0.32
NPAS3-209ENST00000551008 C6orf132Q5T0Z8 1188 aa13.06□□□□□ -0.32
NPAS3-209ENST00000551008 MARC1Q5VT66 337 aa13.06□□□□□ -0.32
NPAS3-209ENST00000551008 ESRP1Q6NXG1 681 aaKnown RBP13.06□□□□□ -0.32
NPAS3-209ENST00000551008 SFTPA2Q8IWL1 248 aa13.06□□□□□ -0.32
NPAS3-209ENST00000551008 IFI44Q8TCB0 444 aa13.06□□□□□ -0.32
NPAS3-209ENST00000551008 PTCD2Q8WV60 388 aaKnown RBP13.06□□□□□ -0.32
NPAS3-209ENST00000551008 BTN2A2Q8WVV5 523 aa13.06□□□□□ -0.32
NPAS3-209ENST00000551008 FATE1Q969F0 183 aa13.06□□□□□ -0.32
NPAS3-209ENST00000551008 RNF157Q96PX1 679 aa13.06□□□□□ -0.32
NPAS3-209ENST00000551008 SEMA3CQ99985 751 aa13.06□□□□□ -0.32
NPAS3-209ENST00000551008 DUSP23Q9BVJ7 150 aa13.06□□□□□ -0.32
NPAS3-209ENST00000551008 MRPL40Q9NQ50 206 aaKnown RBP13.06□□□□□ -0.32
NPAS3-209ENST00000551008 SPASTQ9UBP0 616 aa13.06□□□□□ -0.32
NPAS3-209ENST00000551008 CLCA2Q9UQC9 943 aa13.06□□□□□ -0.32
NPAS3-209ENST00000551008 HYOU1Q9Y4L1 999 aa13.06□□□□□ -0.32
NPAS3-209ENST00000551008 EME2A4GXA9 379 aaPredicted RBP13.05□□□□□ -0.32
NPAS3-209ENST00000551008 MATN3O15232 486 aa13.05□□□□□ -0.32
NPAS3-209ENST00000551008 AKR1B10O60218 316 aa13.05□□□□□ -0.32
NPAS3-209ENST00000551008 MT-CO3P00414 261 aa13.05□□□□□ -0.32
NPAS3-209ENST00000551008 SOD1P00441 154 aa13.05□□□□□ -0.32
NPAS3-209ENST00000551008 HLA-DQB2P05538 268 aa13.05□□□□□ -0.32
NPAS3-209ENST00000551008 GP1BAP07359 652 aa13.05□□□□□ -0.32
NPAS3-209ENST00000551008 MMP2P08253 660 aa13.05□□□□□ -0.32
NPAS3-209ENST00000551008 ALPIP09923 528 aa13.05□□□□□ -0.32
NPAS3-209ENST00000551008 CTPS1P17812 591 aa13.05□□□□□ -0.32
NPAS3-209ENST00000551008 HNF1BP35680 557 aa13.05□□□□□ -0.32
NPAS3-209ENST00000551008 PDX1P52945 283 aa13.05□□□□□ -0.32
NPAS3-209ENST00000551008 SRP54P61011 504 aaKnown RBP13.05□□□□□ -0.32
NPAS3-209ENST00000551008 TCEAL1Q15170 157 aa13.05□□□□□ -0.32
NPAS3-209ENST00000551008 RALGPS1Q5JS13 557 aa13.05□□□□□ -0.32
NPAS3-209ENST00000551008 FAXCQ5TGI0 409 aa13.05□□□□□ -0.32
NPAS3-209ENST00000551008 ENPP7Q6UWV6 458 aa13.05□□□□□ -0.32
NPAS3-209ENST00000551008 EFL1Q7Z2Z2 1120 aaKnown RBP13.05□□□□□ -0.32
NPAS3-209ENST00000551008 LRRC49Q8IUZ0 686 aa13.05□□□□□ -0.32
NPAS3-209ENST00000551008 HID1Q8IV36 788 aa13.05□□□□□ -0.32
NPAS3-209ENST00000551008 CNTD1Q8N815 330 aa13.05□□□□□ -0.32
NPAS3-209ENST00000551008 KYQ8NBH2 561 aa13.05□□□□□ -0.32
NPAS3-209ENST00000551008 KCTD6Q8NC69 237 aa13.05□□□□□ -0.32
NPAS3-209ENST00000551008 PDCD6IPQ8WUM4 868 aaKnown RBP13.05□□□□□ -0.32
NPAS3-209ENST00000551008 HDAC11Q96DB2 347 aa13.05□□□□□ -0.32
NPAS3-209ENST00000551008 DTD2Q96FN9 168 aa13.05□□□□□ -0.32
NPAS3-209ENST00000551008 SCRN2Q96FV2 425 aa13.05□□□□□ -0.32
NPAS3-209ENST00000551008 WDR92Q96MX6 357 aa13.05□□□□□ -0.32
NPAS3-209ENST00000551008 USP29Q9HBJ7 922 aa13.05□□□□□ -0.32
NPAS3-209ENST00000551008 RABGEF1Q9UJ41 708 aa13.05□□□□□ -0.32
NPAS3-209ENST00000551008 TFR2Q9UP52 801 aa13.05□□□□□ -0.32
NPAS3-209ENST00000551008 RAI2Q9Y5P3 530 aa13.05□□□□□ -0.32
NPAS3-209ENST00000551008 DGKBQ9Y6T7 804 aa13.05□□□□□ -0.32
NPAS3-209ENST00000551008 PMS2P1A4D2B8 440 aa13.04□□□□□ -0.32
NPAS3-209ENST00000551008 ZNF487B1APH4 448 aa13.04□□□□□ -0.32
NPAS3-209ENST00000551008 RASGRP1O95267 797 aa13.04□□□□□ -0.32
NPAS3-209ENST00000551008 KRT7P08729 469 aa13.04□□□□□ -0.32
NPAS3-209ENST00000551008 HOXC4P09017 264 aaPredicted RBP13.04□□□□□ -0.32
NPAS3-209ENST00000551008 CCNCP24863 283 aa13.04□□□□□ -0.32
NPAS3-209ENST00000551008 ETV3P41162 512 aa13.04□□□□□ -0.32
NPAS3-209ENST00000551008 POLR2LP62875 67 aaKnown RBP13.04□□□□□ -0.32
NPAS3-209ENST00000551008 E2F1Q01094 437 aa13.04□□□□□ -0.32
NPAS3-209ENST00000551008 ZBTB17Q13105 803 aa13.04□□□□□ -0.32
NPAS3-209ENST00000551008 ACOX1Q15067 660 aa13.04□□□□□ -0.32
NPAS3-209ENST00000551008 IFI16Q16666 785 aaKnown RBP13.04□□□□□ -0.32
NPAS3-209ENST00000551008 SLC9A4Q6AI14 798 aa13.04□□□□□ -0.32
NPAS3-209ENST00000551008 PNCKQ6P2M8 343 aa13.04□□□□□ -0.32
NPAS3-209ENST00000551008 C19orf48Q6RUI8 117 aa13.04□□□□□ -0.32
NPAS3-209ENST00000551008 CRTC1Q6UUV9 634 aa13.04□□□□□ -0.32
NPAS3-209ENST00000551008 NPNTQ6UXI9 565 aa13.04□□□□□ -0.32
NPAS3-209ENST00000551008 Q6ZVL8 140 aa13.04□□□□□ -0.32
NPAS3-209ENST00000551008 TECPR1Q7Z6L1 1165 aa13.04□□□□□ -0.32
NPAS3-209ENST00000551008 CCL4L1Q8NHW4 92 aa13.04□□□□□ -0.32
NPAS3-209ENST00000551008 NXPE2Q96DL1 559 aa13.04□□□□□ -0.32
NPAS3-209ENST00000551008 CRELD1Q96HD1 420 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms