RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 ACACAQ13085 2346 aa13.51□□□□□ -0.25
NUP188-211ENST00000550219 CHD5Q8TDI0 1954 aa13.51□□□□□ -0.25
NUP188-211ENST00000550219 KIF2AO00139 706 aaPredicted RBP13.51□□□□□ -0.25
NUP188-211ENST00000550219 MUSKO15146 869 aa13.51□□□□□ -0.25
NUP188-211ENST00000550219 FGF10O15520 208 aaPredicted RBP13.51□□□□□ -0.25
NUP188-211ENST00000550219 ZRANB2O95218 330 aaKnown RBP eCLIP13.51□□□□□ -0.25
NUP188-211ENST00000550219 ATP1A1P05023 1023 aaKnown RBP13.51□□□□□ -0.25
NUP188-211ENST00000550219 PRKCGP05129 697 aa13.51□□□□□ -0.25
NUP188-211ENST00000550219 GP1BAP07359 652 aa13.51□□□□□ -0.25
NUP188-211ENST00000550219 TNNT1P13805 278 aa13.51□□□□□ -0.25
NUP188-211ENST00000550219 TIMP2P16035 220 aa13.51□□□□□ -0.25
NUP188-211ENST00000550219 TGM2P21980 687 aa13.51□□□□□ -0.25
NUP188-211ENST00000550219 GJC1P36383 396 aa13.51□□□□□ -0.25
NUP188-211ENST00000550219 CDH6P55285 790 aa13.51□□□□□ -0.25
NUP188-211ENST00000550219 YBEYP58557 167 aaPredicted RBP13.51□□□□□ -0.25
NUP188-211ENST00000550219 SERINC3Q13530 473 aa13.51□□□□□ -0.25
NUP188-211ENST00000550219 DPYSL3Q14195 570 aa13.51□□□□□ -0.25
NUP188-211ENST00000550219 CYTH1Q15438 398 aa13.51□□□□□ -0.25
NUP188-211ENST00000550219 NR0B2Q15466 257 aa13.51□□□□□ -0.25
NUP188-211ENST00000550219 FAXCQ5TGI0 409 aa13.51□□□□□ -0.25
NUP188-211ENST00000550219 PAPD7Q5XG87 772 aaKnown RBP13.51□□□□□ -0.25
NUP188-211ENST00000550219 MACC1Q6ZN28 852 aa13.51□□□□□ -0.25
NUP188-211ENST00000550219 MAP7D3Q8IWC1 876 aa13.51□□□□□ -0.25
NUP188-211ENST00000550219 RCOR2Q8IZ40 523 aa13.51□□□□□ -0.25
NUP188-211ENST00000550219 CACTIN-AS1Q8N1I8 211 aa13.51□□□□□ -0.25
NUP188-211ENST00000550219 TP53I13Q8NBR0 393 aaPredicted RBP13.51□□□□□ -0.25
NUP188-211ENST00000550219 KCTD6Q8NC69 237 aa13.51□□□□□ -0.25
NUP188-211ENST00000550219 ASB12Q8WXK4 309 aa13.51□□□□□ -0.25
NUP188-211ENST00000550219 CENPTQ96BT3 561 aa13.51□□□□□ -0.25
NUP188-211ENST00000550219 FAF2Q96CS3 445 aa13.51□□□□□ -0.25
NUP188-211ENST00000550219 C16orf45Q96MC5 204 aaPredicted RBP13.51□□□□□ -0.25
NUP188-211ENST00000550219 UBL7Q96S82 380 aaPredicted RBP13.51□□□□□ -0.25
NUP188-211ENST00000550219 SLC13A1Q9BZW2 595 aa13.51□□□□□ -0.25
NUP188-211ENST00000550219 RCOR3Q9P2K3 495 aaPredicted RBP13.51□□□□□ -0.25
NUP188-211ENST00000550219 PNMA8BQ9ULN7 279 aaPredicted RBP13.51□□□□□ -0.25
NUP188-211ENST00000550219 DOLKQ9UPQ8 538 aa13.51□□□□□ -0.25
NUP188-211ENST00000550219 CSNK1G3Q9Y6M4 447 aa13.51□□□□□ -0.25
NUP188-211ENST00000550219 CELSR3Q9NYQ7 3312 aa13.51□□□□□ -0.25
NUP188-211ENST00000550219 CTAGE9A4FU28 777 aa13.5□□□□□ -0.25
NUP188-211ENST00000550219 WASH4PA8MWX3 477 aa13.5□□□□□ -0.25
NUP188-211ENST00000550219 J3KR12 359 aa13.5□□□□□ -0.25
NUP188-211ENST00000550219 EEF2KO00418 725 aaKnown RBP13.5□□□□□ -0.25
NUP188-211ENST00000550219 GCATO75600 419 aa13.5□□□□□ -0.25
NUP188-211ENST00000550219 KRT1P04264 644 aa13.5□□□□□ -0.25
NUP188-211ENST00000550219 PRB1P04280 392 aa13.5□□□□□ -0.25
NUP188-211ENST00000550219 PCCBP05166 539 aa13.5□□□□□ -0.25
NUP188-211ENST00000550219 ANXA6P08133 673 aa13.5□□□□□ -0.25
NUP188-211ENST00000550219 CELA2BP08218 269 aaPredicted RBP13.5□□□□□ -0.25
NUP188-211ENST00000550219 CD48P09326 243 aa13.5□□□□□ -0.25
NUP188-211ENST00000550219 PYGMP11217 842 aa13.5□□□□□ -0.25
NUP188-211ENST00000550219 C6P13671 934 aa13.5□□□□□ -0.25
NUP188-211ENST00000550219 PTPN7P35236 360 aa13.5□□□□□ -0.25
NUP188-211ENST00000550219 PCBP4P57723 403 aaKnown RBP13.5□□□□□ -0.25
NUP188-211ENST00000550219 COPS2P61201 443 aa13.5□□□□□ -0.25
NUP188-211ENST00000550219 CXADRP78310 365 aa13.5□□□□□ -0.25
NUP188-211ENST00000550219 ELP6Q0PNE2 266 aa13.5□□□□□ -0.25
NUP188-211ENST00000550219 INO80DQ53TQ3 878 aaPredicted RBP13.5□□□□□ -0.25
NUP188-211ENST00000550219 PERM1Q5SV97 790 aa13.5□□□□□ -0.25
NUP188-211ENST00000550219 FOXR1Q6PIV2 292 aa13.5□□□□□ -0.25
NUP188-211ENST00000550219 SYT10Q6XYQ8 523 aa13.5□□□□□ -0.25
NUP188-211ENST00000550219 SPACA3Q8IXA5 215 aa13.5□□□□□ -0.25
NUP188-211ENST00000550219 SLC35F3Q8IY50 421 aa13.5□□□□□ -0.25
NUP188-211ENST00000550219 UMODL1-AS1Q8N2C9 162 aa13.5□□□□□ -0.25
NUP188-211ENST00000550219 GLMNQ92990 594 aa13.5□□□□□ -0.25
NUP188-211ENST00000550219 RBM41Q96IZ5 413 aaKnown RBP13.5□□□□□ -0.25
NUP188-211ENST00000550219 NAPGQ99747 312 aaPredicted RBP13.5□□□□□ -0.25
NUP188-211ENST00000550219 ZNF670Q9BS34 389 aa13.5□□□□□ -0.25
NUP188-211ENST00000550219 CARD9Q9H257 536 aa13.5□□□□□ -0.25
NUP188-211ENST00000550219 PRORYQ9H606 182 aa13.5□□□□□ -0.25
NUP188-211ENST00000550219 PCDH12Q9NPG4 1184 aa13.5□□□□□ -0.25
NUP188-211ENST00000550219 NCKIPSDQ9NZQ3 722 aa13.5□□□□□ -0.25
NUP188-211ENST00000550219 CWC15Q9P013 229 aaKnown RBP13.5□□□□□ -0.25
NUP188-211ENST00000550219 SIRPGQ9P1W8 387 aa13.5□□□□□ -0.25
NUP188-211ENST00000550219 DKK3Q9UBP4 350 aa13.5□□□□□ -0.25
NUP188-211ENST00000550219 SATB2Q9UPW6 733 aa13.5□□□□□ -0.25
NUP188-211ENST00000550219 EFR3BQ9Y2G0 817 aa13.5□□□□□ -0.25
NUP188-211ENST00000550219 ARID1BQ8NFD5 2236 aaPredicted RBP13.49□□□□□ -0.25
NUP188-211ENST00000550219 LRRD1A4D1F6 860 aa13.49□□□□□ -0.25
NUP188-211ENST00000550219 H3BRJ5 948 aa13.49□□□□□ -0.25
NUP188-211ENST00000550219 DFFAO00273 331 aa13.49□□□□□ -0.25
NUP188-211ENST00000550219 DAPK3O43293 454 aa13.49□□□□□ -0.25
NUP188-211ENST00000550219 TSHRP16473 764 aa13.49□□□□□ -0.25
NUP188-211ENST00000550219 CDKN2BP42772 138 aa13.49□□□□□ -0.25
NUP188-211ENST00000550219 RGRP47804 291 aa13.49□□□□□ -0.25
NUP188-211ENST00000550219 RPIAP49247 311 aa13.49□□□□□ -0.25
NUP188-211ENST00000550219 PPARDQ03181 441 aa13.49□□□□□ -0.25
NUP188-211ENST00000550219 TLE3Q04726 772 aa13.49□□□□□ -0.25
NUP188-211ENST00000550219 DPYSQ14117 519 aa13.49□□□□□ -0.25
NUP188-211ENST00000550219 KRT81Q14533 505 aa13.49□□□□□ -0.25
NUP188-211ENST00000550219 LRRC14Q15048 493 aa13.49□□□□□ -0.25
NUP188-211ENST00000550219 PPP2R5EQ16537 467 aa13.49□□□□□ -0.25
NUP188-211ENST00000550219 ISXQ2M1V0 245 aa13.49□□□□□ -0.25
NUP188-211ENST00000550219 PPP6R3Q5H9R7 873 aaPredicted RBP13.49□□□□□ -0.25
NUP188-211ENST00000550219 C6orf132Q5T0Z8 1188 aa13.49□□□□□ -0.25
NUP188-211ENST00000550219 ERAP2Q6P179 960 aa13.49□□□□□ -0.25
NUP188-211ENST00000550219 MFSD7Q6UXD7 560 aa13.49□□□□□ -0.25
NUP188-211ENST00000550219 SPOCD1Q6ZMY3 1216 aa13.49□□□□□ -0.25
NUP188-211ENST00000550219 RFX8Q6ZV50 586 aa13.49□□□□□ -0.25
NUP188-211ENST00000550219 RD3Q7Z3Z2 195 aa13.49□□□□□ -0.25
NUP188-211ENST00000550219 HID1Q8IV36 788 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms