RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 AP4E1Q9UPM8 1137 aa13.63□□□□□ -0.23
TROAP-211ENST00000549891 SIK3Q9Y2K2 1263 aa13.63□□□□□ -0.23
TROAP-211ENST00000549891 RNF215Q9Y6U7 377 aa13.63□□□□□ -0.23
TROAP-211ENST00000549891 BOD1L1Q8NFC6 3051 aa13.63□□□□□ -0.23
TROAP-211ENST00000549891 PRAMEF33A0A0G2JMD5 474 aa13.62□□□□□ -0.23
TROAP-211ENST00000549891 A0A1W2PQC6 194 aa13.62□□□□□ -0.23
TROAP-211ENST00000549891 EEF2KO00418 725 aaKnown RBP13.62□□□□□ -0.23
TROAP-211ENST00000549891 DAPK3O43293 454 aa13.62□□□□□ -0.23
TROAP-211ENST00000549891 PRAMEF10O60809 474 aa13.62□□□□□ -0.23
TROAP-211ENST00000549891 PRKCGP05129 697 aa13.62□□□□□ -0.23
TROAP-211ENST00000549891 ITIH1P19827 911 aa13.62□□□□□ -0.23
TROAP-211ENST00000549891 CSRP3P50461 194 aa13.62□□□□□ -0.23
TROAP-211ENST00000549891 RENBPP51606 427 aa13.62□□□□□ -0.23
TROAP-211ENST00000549891 RALGDSQ12967 914 aa13.62□□□□□ -0.23
TROAP-211ENST00000549891 PEX6Q13608 980 aa13.62□□□□□ -0.23
TROAP-211ENST00000549891 CLPPQ16740 277 aaPredicted RBP13.62□□□□□ -0.23
TROAP-211ENST00000549891 LINC00303Q3SY05 128 aa13.62□□□□□ -0.23
TROAP-211ENST00000549891 MAP9Q49MG5 647 aa13.62□□□□□ -0.23
TROAP-211ENST00000549891 PPP1R15BQ5SWA1 713 aa13.62□□□□□ -0.23
TROAP-211ENST00000549891 PHF19Q5T6S3 580 aa13.62□□□□□ -0.23
TROAP-211ENST00000549891 AFMIDQ63HM1 303 aa13.62□□□□□ -0.23
TROAP-211ENST00000549891 DPPA4Q7L190 304 aa13.62□□□□□ -0.23
TROAP-211ENST00000549891 PIM3Q86V86 326 aa13.62□□□□□ -0.23
TROAP-211ENST00000549891 ZSWIM9Q86XI8 627 aa13.62□□□□□ -0.23
TROAP-211ENST00000549891 EXD3Q8N9H8 876 aa13.62□□□□□ -0.23
TROAP-211ENST00000549891 ECHDC3Q96DC8 303 aa13.62□□□□□ -0.23
TROAP-211ENST00000549891 SLC39A8Q9C0K1 460 aa13.62□□□□□ -0.23
TROAP-211ENST00000549891 TMEM168Q9H0V1 697 aa13.62□□□□□ -0.23
TROAP-211ENST00000549891 CYP4F12Q9HCS2 524 aa13.62□□□□□ -0.23
TROAP-211ENST00000549891 MRPL40Q9NQ50 206 aaKnown RBP13.62□□□□□ -0.23
TROAP-211ENST00000549891 CHMP5Q9NZZ3 219 aa13.62□□□□□ -0.23
TROAP-211ENST00000549891 MOSPD1Q9UJG1 213 aa13.62□□□□□ -0.23
TROAP-211ENST00000549891 GTF3C3Q9Y5Q9 886 aa13.62□□□□□ -0.23
TROAP-211ENST00000549891 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.61□□□□□ -0.23
TROAP-211ENST00000549891 A0A1W2PQ67 120 aa13.61□□□□□ -0.23
TROAP-211ENST00000549891 PRSS38A1L453 326 aa13.61□□□□□ -0.23
TROAP-211ENST00000549891 CPNE6O95741 557 aa13.61□□□□□ -0.23
TROAP-211ENST00000549891 MYCLP1P12525 358 aaPredicted RBP13.61□□□□□ -0.23
TROAP-211ENST00000549891 RGRP47804 291 aa13.61□□□□□ -0.23
TROAP-211ENST00000549891 MAPK10P53779 464 aa13.61□□□□□ -0.23
TROAP-211ENST00000549891 AP1S1P61966 158 aa13.61□□□□□ -0.23
TROAP-211ENST00000549891 IL10RBQ08334 325 aa13.61□□□□□ -0.23
TROAP-211ENST00000549891 ACOX1Q15067 660 aa13.61□□□□□ -0.23
TROAP-211ENST00000549891 ERMARDQ5T6L9 678 aa13.61□□□□□ -0.23
TROAP-211ENST00000549891 KCTD16Q68DU8 428 aa13.61□□□□□ -0.23
TROAP-211ENST00000549891 ACAD10Q6JQN1 1059 aa13.61□□□□□ -0.23
TROAP-211ENST00000549891 PNCKQ6P2M8 343 aa13.61□□□□□ -0.23
TROAP-211ENST00000549891 NYAP1Q6ZVC0 841 aa13.61□□□□□ -0.23
TROAP-211ENST00000549891 SLITRK4Q8IW52 837 aa13.61□□□□□ -0.23
TROAP-211ENST00000549891 EXTL1Q92935 676 aa13.61□□□□□ -0.23
TROAP-211ENST00000549891 USP7Q93009 1102 aa13.61□□□□□ -0.23
TROAP-211ENST00000549891 GSDMCQ9BYG8 508 aa13.61□□□□□ -0.23
TROAP-211ENST00000549891 DHX35Q9H5Z1 703 aaKnown RBP13.61□□□□□ -0.23
TROAP-211ENST00000549891 PHPT1Q9NRX4 125 aaPredicted RBP13.61□□□□□ -0.23
TROAP-211ENST00000549891 STARD5Q9NSY2 213 aa13.61□□□□□ -0.23
TROAP-211ENST00000549891 ZFC3H1O60293 1989 aaKnown RBP13.6□□□□□ -0.23
TROAP-211ENST00000549891 RHPN2P1A8MT19 583 aa13.6□□□□□ -0.23
TROAP-211ENST00000549891 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.6□□□□□ -0.23
TROAP-211ENST00000549891 DFFAO00273 331 aa13.6□□□□□ -0.23
TROAP-211ENST00000549891 HGSO14964 777 aaPredicted RBP13.6□□□□□ -0.23
TROAP-211ENST00000549891 TEX33O43247 280 aa13.6□□□□□ -0.23
TROAP-211ENST00000549891 RNF8O76064 485 aa13.6□□□□□ -0.23
TROAP-211ENST00000549891 CCNB1P14635 433 aa13.6□□□□□ -0.23
TROAP-211ENST00000549891 PSMA2P25787 234 aa13.6□□□□□ -0.23
TROAP-211ENST00000549891 SCNN1BP51168 640 aa13.6□□□□□ -0.23
TROAP-211ENST00000549891 ZNF135P52742 658 aaPredicted RBP13.6□□□□□ -0.23
TROAP-211ENST00000549891 COPB1P53618 953 aaKnown RBP13.6□□□□□ -0.23
TROAP-211ENST00000549891 ILF3Q12906 894 aaKnown RBP eCLIP13.6□□□□□ -0.23
TROAP-211ENST00000549891 BIRC2Q13490 618 aa13.6□□□□□ -0.23
TROAP-211ENST00000549891 ATG14Q6ZNE5 492 aa13.6□□□□□ -0.23
TROAP-211ENST00000549891 RFX8Q6ZV50 586 aa13.6□□□□□ -0.23
TROAP-211ENST00000549891 DTX1Q86Y01 620 aa13.6□□□□□ -0.23
TROAP-211ENST00000549891 MCOLN2Q8IZK6 566 aa13.6□□□□□ -0.23
TROAP-211ENST00000549891 GPBAR1Q8TDU6 330 aa13.6□□□□□ -0.23
TROAP-211ENST00000549891 NUS1Q96E22 293 aa13.6□□□□□ -0.23
TROAP-211ENST00000549891 SEMA3CQ99985 751 aa13.6□□□□□ -0.23
TROAP-211ENST00000549891 LGR4Q9BXB1 951 aa13.6□□□□□ -0.23
TROAP-211ENST00000549891 CARS2Q9HA77 564 aaKnown RBP13.6□□□□□ -0.23
TROAP-211ENST00000549891 PARVAQ9NVD7 372 aa13.6□□□□□ -0.23
TROAP-211ENST00000549891 FANCLQ9NW38 375 aa13.6□□□□□ -0.23
TROAP-211ENST00000549891 SEPT3Q9UH03 358 aa13.6□□□□□ -0.23
TROAP-211ENST00000549891 PCDHGA4Q9Y5G9 962 aa13.6□□□□□ -0.23
TROAP-211ENST00000549891 SDK2Q58EX2 2172 aa13.59□□□□□ -0.23
TROAP-211ENST00000549891 LGALS16A8MUM7 142 aa13.59□□□□□ -0.23
TROAP-211ENST00000549891 C9orf172C9J069 976 aa13.59□□□□□ -0.23
TROAP-211ENST00000549891 STMND1H3BQB6 276 aa13.59□□□□□ -0.23
TROAP-211ENST00000549891 PYCARD-AS1I3L0S3 204 aa13.59□□□□□ -0.23
TROAP-211ENST00000549891 AGRPO00253 132 aa13.59□□□□□ -0.23
TROAP-211ENST00000549891 TRAFD1O14545 582 aaPredicted RBP13.59□□□□□ -0.23
TROAP-211ENST00000549891 ARHGAP6O43182 974 aa13.59□□□□□ -0.23
TROAP-211ENST00000549891 SOCS5O75159 536 aa13.59□□□□□ -0.23
TROAP-211ENST00000549891 KRT10P13645 584 aa13.59□□□□□ -0.23
TROAP-211ENST00000549891 FERP16591 822 aa13.59□□□□□ -0.23
TROAP-211ENST00000549891 ERCC2P18074 760 aa13.59□□□□□ -0.23
TROAP-211ENST00000549891 ALDH4A1P30038 563 aa13.59□□□□□ -0.23
TROAP-211ENST00000549891 HSPA9P38646 679 aaKnown RBP13.59□□□□□ -0.23
TROAP-211ENST00000549891 ETV5P41161 510 aa13.59□□□□□ -0.23
TROAP-211ENST00000549891 ATP1A2P50993 1020 aa13.59□□□□□ -0.23
TROAP-211ENST00000549891 B4GALNT1Q00973 533 aa13.59□□□□□ -0.23
TROAP-211ENST00000549891 OGDHQ02218 1023 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms