RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 CNTD1Q8N815 330 aa12.17□□□□□ -0.46
HDAC7-226ENST00000547259 GLIS1Q8NBF1 620 aa12.17□□□□□ -0.46
HDAC7-226ENST00000547259 OR2AP1Q8NGE2 309 aa12.17□□□□□ -0.46
HDAC7-226ENST00000547259 OR6K2Q8NGY2 324 aa12.17□□□□□ -0.46
HDAC7-226ENST00000547259 FRS2Q8WU20 508 aa12.17□□□□□ -0.46
HDAC7-226ENST00000547259 SLCO2A1Q92959 643 aa12.17□□□□□ -0.46
HDAC7-226ENST00000547259 NUDCD1Q96RS6 583 aa12.17□□□□□ -0.46
HDAC7-226ENST00000547259 SEMA3CQ99985 751 aa12.17□□□□□ -0.46
HDAC7-226ENST00000547259 PABPC3Q9H361 631 aaKnown RBP12.17□□□□□ -0.46
HDAC7-226ENST00000547259 ZDHHC6Q9H6R6 413 aa12.17□□□□□ -0.46
HDAC7-226ENST00000547259 GLOD4Q9HC38 313 aa12.17□□□□□ -0.46
HDAC7-226ENST00000547259 FBXL12Q9NXK8 326 aa12.17□□□□□ -0.46
HDAC7-226ENST00000547259 PAK5Q9P286 719 aa12.17□□□□□ -0.46
HDAC7-226ENST00000547259 HECAQ9UBI9 543 aaPredicted RBP12.17□□□□□ -0.46
HDAC7-226ENST00000547259 RAXQ9Y2V3 346 aa12.17□□□□□ -0.46
HDAC7-226ENST00000547259 FARP1Q9Y4F1 1045 aaPredicted RBP12.17□□□□□ -0.46
HDAC7-226ENST00000547259 TP53BP1Q12888 1972 aaPredicted RBP12.17□□□□□ -0.46
HDAC7-226ENST00000547259 LOC400499M0QZD8 3231 aa12.16□□□□□ -0.46
HDAC7-226ENST00000547259 A0A087WV48 116 aa12.16□□□□□ -0.46
HDAC7-226ENST00000547259 A0A1B0GTQ1 180 aa12.16□□□□□ -0.46
HDAC7-226ENST00000547259 A0A1W2PPC4 97 aa12.16□□□□□ -0.46
HDAC7-226ENST00000547259 TTC24A2A3L6 582 aaPredicted RBP12.16□□□□□ -0.46
HDAC7-226ENST00000547259 GOLGA8CPA6NN73 597 aa12.16□□□□□ -0.46
HDAC7-226ENST00000547259 RAD51CO43502 376 aa12.16□□□□□ -0.46
HDAC7-226ENST00000547259 SIN3BO75182 1162 aa12.16□□□□□ -0.46
HDAC7-226ENST00000547259 ZNF821O75541 412 aaPredicted RBP12.16□□□□□ -0.46
HDAC7-226ENST00000547259 PSMB4P28070 264 aa12.16□□□□□ -0.46
HDAC7-226ENST00000547259 CD68P34810 354 aaPredicted RBP12.16□□□□□ -0.46
HDAC7-226ENST00000547259 RPL22P35268 128 aaKnown RBP12.16□□□□□ -0.46
HDAC7-226ENST00000547259 PTGIRP43119 386 aa12.16□□□□□ -0.46
HDAC7-226ENST00000547259 ARRB1P49407 418 aaPredicted RBP12.16□□□□□ -0.46
HDAC7-226ENST00000547259 SCNN1BP51168 640 aa12.16□□□□□ -0.46
HDAC7-226ENST00000547259 CCR5P51681 352 aa12.16□□□□□ -0.46
HDAC7-226ENST00000547259 AP1S1P61966 158 aa12.16□□□□□ -0.46
HDAC7-226ENST00000547259 DSC2Q02487 901 aa12.16□□□□□ -0.46
HDAC7-226ENST00000547259 RAD51Q06609 339 aa12.16□□□□□ -0.46
HDAC7-226ENST00000547259 CYP4F3Q08477 520 aa12.16□□□□□ -0.46
HDAC7-226ENST00000547259 PTK6Q13882 451 aa12.16□□□□□ -0.46
HDAC7-226ENST00000547259 PRPSAP1Q14558 356 aa12.16□□□□□ -0.46
HDAC7-226ENST00000547259 KCTD19Q17RG1 926 aaPredicted RBP12.16□□□□□ -0.46
HDAC7-226ENST00000547259 C4orf22Q6V702 233 aa12.16□□□□□ -0.46
HDAC7-226ENST00000547259 SYDE1Q6ZW31 735 aaPredicted RBP12.16□□□□□ -0.46
HDAC7-226ENST00000547259 MAATS1Q7Z4T9 603 aa12.16□□□□□ -0.46
HDAC7-226ENST00000547259 SRLQ86TD4 932 aa12.16□□□□□ -0.46
HDAC7-226ENST00000547259 MMGT1Q8N4V1 131 aa12.16□□□□□ -0.46
HDAC7-226ENST00000547259 TAB3Q8N5C8 712 aaPredicted RBP12.16□□□□□ -0.46
HDAC7-226ENST00000547259 NOA1Q8NC60 698 aaKnown RBP12.16□□□□□ -0.46
HDAC7-226ENST00000547259 OR2A12Q8NGT7 310 aa12.16□□□□□ -0.46
HDAC7-226ENST00000547259 OR2T34Q8NGX1 318 aa12.16□□□□□ -0.46
HDAC7-226ENST00000547259 CCHCR1Q8TD31 782 aa12.16□□□□□ -0.46
HDAC7-226ENST00000547259 HNRNPLLQ8WVV9 542 aaKnown RBP12.16□□□□□ -0.46
HDAC7-226ENST00000547259 OR8D1Q8WZ84 308 aa12.16□□□□□ -0.46
HDAC7-226ENST00000547259 PTPRN2Q92932 1015 aa12.16□□□□□ -0.46
HDAC7-226ENST00000547259 ELF4Q99607 663 aaPredicted RBP12.16□□□□□ -0.46
HDAC7-226ENST00000547259 OMDQ99983 421 aa12.16□□□□□ -0.46
HDAC7-226ENST00000547259 TRIM51Q9BSJ1 452 aa12.16□□□□□ -0.46
HDAC7-226ENST00000547259 SLC25A51Q9H1U9 297 aa12.16□□□□□ -0.46
HDAC7-226ENST00000547259 GDF3Q9NR23 364 aa12.16□□□□□ -0.46
HDAC7-226ENST00000547259 ASIC3Q9UHC3 531 aa12.16□□□□□ -0.46
HDAC7-226ENST00000547259 SMG1Q96Q15 3661 aaKnown RBP12.16□□□□□ -0.46
HDAC7-226ENST00000547259 ARID1BQ8NFD5 2236 aaPredicted RBP12.15□□□□□ -0.46
HDAC7-226ENST00000547259 GOLGA6CA6NDK9 693 aa12.15□□□□□ -0.46
HDAC7-226ENST00000547259 GOLGA6BA6NDN3 693 aa12.15□□□□□ -0.46
HDAC7-226ENST00000547259 FAM187AA6NFU0 413 aa12.15□□□□□ -0.46
HDAC7-226ENST00000547259 H0Y8X5 98 aa12.15□□□□□ -0.46
HDAC7-226ENST00000547259 ALOX15BO15296 676 aa12.15□□□□□ -0.46
HDAC7-226ENST00000547259 INSIG1O15503 277 aa12.15□□□□□ -0.46
HDAC7-226ENST00000547259 SLU7O95391 586 aaKnown RBP12.15□□□□□ -0.46
HDAC7-226ENST00000547259 LDOC1O95751 146 aaPredicted RBP12.15□□□□□ -0.46
HDAC7-226ENST00000547259 ADH1BP00325 375 aa12.15□□□□□ -0.46
HDAC7-226ENST00000547259 GOLGA6DP0CG33 693 aa12.15□□□□□ -0.46
HDAC7-226ENST00000547259 JUPP14923 745 aa12.15□□□□□ -0.46
HDAC7-226ENST00000547259 CR2P20023 1033 aa12.15□□□□□ -0.46
HDAC7-226ENST00000547259 CES1P23141 567 aa12.15□□□□□ -0.46
HDAC7-226ENST00000547259 CD38P28907 300 aa12.15□□□□□ -0.46
HDAC7-226ENST00000547259 FDFT1P37268 417 aa12.15□□□□□ -0.46
HDAC7-226ENST00000547259 CD86P42081 329 aa12.15□□□□□ -0.46
HDAC7-226ENST00000547259 CSNK1DP48730 415 aa12.15□□□□□ -0.46
HDAC7-226ENST00000547259 BASP1P80723 227 aaKnown RBP12.15□□□□□ -0.46
HDAC7-226ENST00000547259 MRPS25P82663 173 aaKnown RBP12.15□□□□□ -0.46
HDAC7-226ENST00000547259 NSUN2Q08J23 767 aaKnown RBP eCLIP12.15□□□□□ -0.46
HDAC7-226ENST00000547259 NIPAL4Q0D2K0 466 aa12.15□□□□□ -0.46
HDAC7-226ENST00000547259 GPS1Q13098 491 aa12.15□□□□□ -0.46
HDAC7-226ENST00000547259 ILKQ13418 452 aa12.15□□□□□ -0.46
HDAC7-226ENST00000547259 ELAVL3Q14576 367 aaKnown RBP12.15□□□□□ -0.46
HDAC7-226ENST00000547259 PARP6Q2NL67 630 aa12.15□□□□□ -0.46
HDAC7-226ENST00000547259 SOWAHCQ53LP3 525 aaPredicted RBP12.15□□□□□ -0.46
HDAC7-226ENST00000547259 RALGPS1Q5JS13 557 aa12.15□□□□□ -0.46
HDAC7-226ENST00000547259 C9orf64Q5T6V5 341 aa12.15□□□□□ -0.46
HDAC7-226ENST00000547259 FAXCQ5TGI0 409 aa12.15□□□□□ -0.46
HDAC7-226ENST00000547259 ALG1LQ6GMV1 187 aa12.15□□□□□ -0.46
HDAC7-226ENST00000547259 CCDC70Q6NSX1 233 aa12.15□□□□□ -0.46
HDAC7-226ENST00000547259 DPY19L3Q6ZPD9 716 aa12.15□□□□□ -0.46
HDAC7-226ENST00000547259 PLPP6Q8IY26 295 aa12.15□□□□□ -0.46
HDAC7-226ENST00000547259 STK40Q8N2I9 435 aa12.15□□□□□ -0.46
HDAC7-226ENST00000547259 PAF1Q8N7H5 531 aa12.15□□□□□ -0.46
HDAC7-226ENST00000547259 CHST14Q8NCH0 376 aa12.15□□□□□ -0.46
HDAC7-226ENST00000547259 LRRN4CLQ8ND94 238 aa12.15□□□□□ -0.46
HDAC7-226ENST00000547259 GRIN3AQ8TCU5 1115 aa12.15□□□□□ -0.46
HDAC7-226ENST00000547259 NXPE2Q96DL1 559 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms