RNA–Protein interactions for RNA: ENST00000545870.1

PRKAB1-209, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 3

Gene PRKAB1, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-209ENST00000545870 VPS4BO75351 444 aa8.35□□□□□ -1.07
PRKAB1-209ENST00000545870 BCAS2O75934 225 aaPredicted RBP8.35□□□□□ -1.07
PRKAB1-209ENST00000545870 PDE5AO76074 875 aa8.35□□□□□ -1.07
PRKAB1-209ENST00000545870 PARNO95453 639 aaKnown RBP8.35□□□□□ -1.07
PRKAB1-209ENST00000545870 LATS1O95835 1130 aa8.35□□□□□ -1.07
PRKAB1-209ENST00000545870 FGF4P08620 206 aa8.35□□□□□ -1.07
PRKAB1-209ENST00000545870 F7P08709 466 aaPredicted RBP8.35□□□□□ -1.07
PRKAB1-209ENST00000545870 ME2P23368 584 aa8.35□□□□□ -1.07
PRKAB1-209ENST00000545870 ATP5C1P36542 298 aaKnown RBP8.35□□□□□ -1.07
PRKAB1-209ENST00000545870 PPP3CCP48454 512 aa8.35□□□□□ -1.07
PRKAB1-209ENST00000545870 HSPA13P48723 471 aa8.35□□□□□ -1.07
PRKAB1-209ENST00000545870 SLC11A1P49279 550 aa8.35□□□□□ -1.07
PRKAB1-209ENST00000545870 STC1P52823 247 aa8.35□□□□□ -1.07
PRKAB1-209ENST00000545870 PRMT2P55345 433 aa8.35□□□□□ -1.07
PRKAB1-209ENST00000545870 ATP6V0D1P61421 351 aa8.35□□□□□ -1.07
PRKAB1-209ENST00000545870 HERVK_113P63132 956 aa8.35□□□□□ -1.07
PRKAB1-209ENST00000545870 ZNF460Q14592 562 aa8.35□□□□□ -1.07
PRKAB1-209ENST00000545870 PDCD2Q16342 344 aaPredicted RBP8.35□□□□□ -1.07
PRKAB1-209ENST00000545870 ZNF423Q2M1K9 1284 aa8.35□□□□□ -1.07
PRKAB1-209ENST00000545870 MGAT5BQ3V5L5 792 aa8.35□□□□□ -1.07
PRKAB1-209ENST00000545870 SPATS1Q496A3 300 aa8.35□□□□□ -1.07
PRKAB1-209ENST00000545870 ZNF678Q5SXM1 525 aa8.35□□□□□ -1.07
PRKAB1-209ENST00000545870 OGFRL1Q5TC84 451 aaPredicted RBP8.35□□□□□ -1.07
PRKAB1-209ENST00000545870 IRAK1BP1Q5VVH5 260 aa8.35□□□□□ -1.07
PRKAB1-209ENST00000545870 ASTLQ6HA08 431 aaPredicted RBP8.35□□□□□ -1.07
PRKAB1-209ENST00000545870 NADSYN1Q6IA69 706 aa8.35□□□□□ -1.07
PRKAB1-209ENST00000545870 SLC8B1Q6J4K2 584 aa8.35□□□□□ -1.07
PRKAB1-209ENST00000545870 TMEM154Q6P9G4 183 aa8.35□□□□□ -1.07
PRKAB1-209ENST00000545870 AFTPHQ6ULP2 937 aa8.35□□□□□ -1.07
PRKAB1-209ENST00000545870 CUZD1Q86UP6 607 aa8.35□□□□□ -1.07
PRKAB1-209ENST00000545870 PDSS2Q86YH6 399 aa8.35□□□□□ -1.07
PRKAB1-209ENST00000545870 HPS6Q86YV9 775 aa8.35□□□□□ -1.07
PRKAB1-209ENST00000545870 HOMEZQ8IX15 550 aa8.35□□□□□ -1.07
PRKAB1-209ENST00000545870 KBTBD2Q8IY47 623 aa8.35□□□□□ -1.07
PRKAB1-209ENST00000545870 LGI2Q8N0V4 545 aa8.35□□□□□ -1.07
PRKAB1-209ENST00000545870 OR4L1Q8NH43 312 aa8.35□□□□□ -1.07
PRKAB1-209ENST00000545870 RCN3Q96D15 328 aa8.35□□□□□ -1.07
PRKAB1-209ENST00000545870 CATSPER2Q96P56 530 aa8.35□□□□□ -1.07
PRKAB1-209ENST00000545870 TRIB3Q96RU7 358 aa8.35□□□□□ -1.07
PRKAB1-209ENST00000545870 SEPT5Q99719 369 aaPredicted RBP8.35□□□□□ -1.07
PRKAB1-209ENST00000545870 C19orf43Q9BQ61 176 aa8.35□□□□□ -1.07
PRKAB1-209ENST00000545870 AARSD1Q9BTE6 412 aaKnown RBP8.35□□□□□ -1.07
PRKAB1-209ENST00000545870 SLC25A23Q9BV35 468 aa8.35□□□□□ -1.07
PRKAB1-209ENST00000545870 ERVK-6Q9BXR3 956 aa8.35□□□□□ -1.07
PRKAB1-209ENST00000545870 GPR62Q9BZJ7 368 aa8.35□□□□□ -1.07
PRKAB1-209ENST00000545870 FAM192AQ9GZU8 254 aa8.35□□□□□ -1.07
PRKAB1-209ENST00000545870 GSTO2Q9H4Y5 243 aa8.35□□□□□ -1.07
PRKAB1-209ENST00000545870 CWH43Q9H720 699 aa8.35□□□□□ -1.07
PRKAB1-209ENST00000545870 WDR41Q9HAD4 459 aa8.35□□□□□ -1.07
PRKAB1-209ENST00000545870 CYP4F11Q9HBI6 524 aa8.35□□□□□ -1.07
PRKAB1-209ENST00000545870 SYTL2Q9HCH5 934 aa8.35□□□□□ -1.07
PRKAB1-209ENST00000545870 PFDN4Q9NQP4 134 aa8.35□□□□□ -1.07
PRKAB1-209ENST00000545870 CATSPERZQ9NTU4 200 aa8.35□□□□□ -1.07
PRKAB1-209ENST00000545870 NLE1Q9NVX2 485 aaPredicted RBP8.35□□□□□ -1.07
PRKAB1-209ENST00000545870 TMEM45AQ9NWC5 275 aa8.35□□□□□ -1.07
PRKAB1-209ENST00000545870 UBA2Q9UBT2 640 aaPredicted RBP8.35□□□□□ -1.07
PRKAB1-209ENST00000545870 TRAF6Q9Y4K3 522 aa8.35□□□□□ -1.07
PRKAB1-209ENST00000545870 COMMD10Q9Y6G5 202 aa8.35□□□□□ -1.07
PRKAB1-209ENST00000545870 ZNF638Q14966 1978 aaKnown RBP8.35□□□□□ -1.07
PRKAB1-209ENST00000545870 MYO18AQ92614 2054 aaKnown RBP8.34□□□□□ -1.07
PRKAB1-209ENST00000545870 NYNRINQ9P2P1 1898 aaKnown RBP8.34□□□□□ -1.07
PRKAB1-209ENST00000545870 MYO16Q9Y6X6 1858 aa8.34□□□□□ -1.07
PRKAB1-209ENST00000545870 UTRNP46939 3433 aa8.34□□□□□ -1.07
PRKAB1-209ENST00000545870 CCDC162PA2VCL2 907 aa8.34□□□□□ -1.07
PRKAB1-209ENST00000545870 CARNS1A5YM72 827 aa8.34□□□□□ -1.07
PRKAB1-209ENST00000545870 TCAF2A6NFQ2 919 aa8.34□□□□□ -1.07
PRKAB1-209ENST00000545870 SYCE1LA8MT33 242 aa8.34□□□□□ -1.07
PRKAB1-209ENST00000545870 H3BNC9 293 aa8.34□□□□□ -1.07
PRKAB1-209ENST00000545870 H3BNX3 289 aa8.34□□□□□ -1.07
PRKAB1-209ENST00000545870 PSMD12O00232 456 aaPredicted RBP8.34□□□□□ -1.07
PRKAB1-209ENST00000545870 TRIM38O00635 465 aa8.34□□□□□ -1.07
PRKAB1-209ENST00000545870 AURKAO14965 403 aa8.34□□□□□ -1.07
PRKAB1-209ENST00000545870 GPC4O75487 556 aa8.34□□□□□ -1.07
PRKAB1-209ENST00000545870 VNN2O95498 520 aa8.34□□□□□ -1.07
PRKAB1-209ENST00000545870 TBX18O95935 607 aa8.34□□□□□ -1.07
PRKAB1-209ENST00000545870 EFEMP2O95967 443 aa8.34□□□□□ -1.07
PRKAB1-209ENST00000545870 GOT2P00505 430 aaKnown RBP8.34□□□□□ -1.07
PRKAB1-209ENST00000545870 PDHA1P08559 390 aa8.34□□□□□ -1.07
PRKAB1-209ENST00000545870 SNRPB2P08579 225 aaKnown RBP8.34□□□□□ -1.07
PRKAB1-209ENST00000545870 CD1DP15813 335 aa8.34□□□□□ -1.07
PRKAB1-209ENST00000545870 RAG1P15918 1043 aa8.34□□□□□ -1.07
PRKAB1-209ENST00000545870 HOXD9P28356 352 aaPredicted RBP8.34□□□□□ -1.07
PRKAB1-209ENST00000545870 ACVRL1P37023 503 aa8.34□□□□□ -1.07
PRKAB1-209ENST00000545870 CCR10P46092 362 aa8.34□□□□□ -1.07
PRKAB1-209ENST00000545870 MRPL19P49406 292 aaKnown RBP8.34□□□□□ -1.07
PRKAB1-209ENST00000545870 ARSDP51689 593 aa8.34□□□□□ -1.07
PRKAB1-209ENST00000545870 ZNF140P52738 457 aaPredicted RBP8.34□□□□□ -1.07
PRKAB1-209ENST00000545870 CDKN2DP55273 166 aa8.34□□□□□ -1.07
PRKAB1-209ENST00000545870 OXCT1P55809 520 aa8.34□□□□□ -1.07
PRKAB1-209ENST00000545870 MAXP61244 160 aa8.34□□□□□ -1.07
PRKAB1-209ENST00000545870 TRAP1Q12931 704 aaKnown RBP8.34□□□□□ -1.07
PRKAB1-209ENST00000545870 PTK2BQ14289 1009 aa8.34□□□□□ -1.07
PRKAB1-209ENST00000545870 IHHQ14623 411 aa8.34□□□□□ -1.07
PRKAB1-209ENST00000545870 ARHGEF6Q15052 776 aa8.34□□□□□ -1.07
PRKAB1-209ENST00000545870 TAF1AQ15573 450 aaPredicted RBP8.34□□□□□ -1.07
PRKAB1-209ENST00000545870 ZNF789Q5FWF6 425 aa8.34□□□□□ -1.07
PRKAB1-209ENST00000545870 RARS2Q5T160 578 aaKnown RBP8.34□□□□□ -1.07
PRKAB1-209ENST00000545870 HECTD3Q5T447 861 aa8.34□□□□□ -1.07
PRKAB1-209ENST00000545870 LHX8Q68G74 356 aa8.34□□□□□ -1.07
PRKAB1-209ENST00000545870 PRMT9Q6P2P2 845 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms