RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 LCA5LO95447 670 aa7.44□□□□□ -1.22
CPSF7-224ENST00000544990 WNT1P04628 370 aa7.44□□□□□ -1.22
CPSF7-224ENST00000544990 ADRB1P08588 477 aa7.44□□□□□ -1.22
CPSF7-224ENST00000544990 CD48P09326 243 aa7.44□□□□□ -1.22
CPSF7-224ENST00000544990 CD59P13987 128 aa7.44□□□□□ -1.22
CPSF7-224ENST00000544990 HNRNPA2B1P22626 353 aaKnown RBP7.44□□□□□ -1.22
CPSF7-224ENST00000544990 KDELR1P24390 212 aa7.44□□□□□ -1.22
CPSF7-224ENST00000544990 IL4RP24394 825 aa7.44□□□□□ -1.22
CPSF7-224ENST00000544990 SERPINA4P29622 427 aa7.44□□□□□ -1.22
CPSF7-224ENST00000544990 ARRB1P49407 418 aaPredicted RBP7.44□□□□□ -1.22
CPSF7-224ENST00000544990 CCT8P50990 548 aa7.44□□□□□ -1.22
CPSF7-224ENST00000544990 SCNN1BP51168 640 aa7.44□□□□□ -1.22
CPSF7-224ENST00000544990 ARSEP51690 589 aa7.44□□□□□ -1.22
CPSF7-224ENST00000544990 TAS2R40P59535 323 aa7.44□□□□□ -1.22
CPSF7-224ENST00000544990 POLR2LP62875 67 aaKnown RBP7.44□□□□□ -1.22
CPSF7-224ENST00000544990 BNC1Q01954 994 aa7.44□□□□□ -1.22
CPSF7-224ENST00000544990 BCL2L1Q07817 233 aa7.44□□□□□ -1.22
CPSF7-224ENST00000544990 ELP6Q0PNE2 266 aa7.44□□□□□ -1.22
CPSF7-224ENST00000544990 ZNF235Q14590 738 aa7.44□□□□□ -1.22
CPSF7-224ENST00000544990 TCEAL1Q15170 157 aa7.44□□□□□ -1.22
CPSF7-224ENST00000544990 IFI16Q16666 785 aaKnown RBP7.44□□□□□ -1.22
CPSF7-224ENST00000544990 ZNF423Q2M1K9 1284 aa7.44□□□□□ -1.22
CPSF7-224ENST00000544990 ZNF284Q2VY69 593 aa7.44□□□□□ -1.22
CPSF7-224ENST00000544990 MARC1Q5VT66 337 aa7.44□□□□□ -1.22
CPSF7-224ENST00000544990 LRRC38Q5VT99 294 aa7.44□□□□□ -1.22
CPSF7-224ENST00000544990 TIGD7Q6NT04 549 aaPredicted RBP7.44□□□□□ -1.22
CPSF7-224ENST00000544990 BRAT1Q6PJG6 821 aa7.44□□□□□ -1.22
CPSF7-224ENST00000544990 LAYNQ6UX15 382 aa7.44□□□□□ -1.22
CPSF7-224ENST00000544990 ARHGAP36Q6ZRI8 547 aa7.44□□□□□ -1.22
CPSF7-224ENST00000544990 PIP4P1Q86T03 277 aa7.44□□□□□ -1.22
CPSF7-224ENST00000544990 VSIG1Q86XK7 387 aa7.44□□□□□ -1.22
CPSF7-224ENST00000544990 DCP2Q8IU60 420 aaKnown RBP7.44□□□□□ -1.22
CPSF7-224ENST00000544990 RHOT1Q8IXI2 618 aa7.44□□□□□ -1.22
CPSF7-224ENST00000544990 NETO2Q8NC67 525 aa7.44□□□□□ -1.22
CPSF7-224ENST00000544990 DEFB124Q8NES8 71 aa7.44□□□□□ -1.22
CPSF7-224ENST00000544990 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.44□□□□□ -1.22
CPSF7-224ENST00000544990 CXorf40AQ8TE69 158 aa7.44□□□□□ -1.22
CPSF7-224ENST00000544990 SETD7Q8WTS6 366 aaKnown RBP7.44□□□□□ -1.22
CPSF7-224ENST00000544990 ASB12Q8WXK4 309 aa7.44□□□□□ -1.22
CPSF7-224ENST00000544990 KLK6Q92876 244 aa7.44□□□□□ -1.22
CPSF7-224ENST00000544990 EXOC2Q96KP1 924 aa7.44□□□□□ -1.22
CPSF7-224ENST00000544990 PSKH2Q96QS6 385 aa7.44□□□□□ -1.22
CPSF7-224ENST00000544990 ELF4Q99607 663 aaPredicted RBP7.44□□□□□ -1.22
CPSF7-224ENST00000544990 C1QTNF7Q9BXJ2 289 aa7.44□□□□□ -1.22
CPSF7-224ENST00000544990 MAK16Q9BXY0 300 aaKnown RBP7.44□□□□□ -1.22
CPSF7-224ENST00000544990 SLC17A9Q9BYT1 436 aa7.44□□□□□ -1.22
CPSF7-224ENST00000544990 ATP13A3Q9H7F0 1226 aa7.44□□□□□ -1.22
CPSF7-224ENST00000544990 IL21RQ9HBE5 538 aa7.44□□□□□ -1.22
CPSF7-224ENST00000544990 DDX56Q9NY93 547 aaKnown RBP7.44□□□□□ -1.22
CPSF7-224ENST00000544990 IMPACTQ9P2X3 320 aa7.44□□□□□ -1.22
CPSF7-224ENST00000544990 ZFR2Q9UPR6 939 aaKnown RBP7.44□□□□□ -1.22
CPSF7-224ENST00000544990 PCDHA13Q9Y5I0 950 aa7.44□□□□□ -1.22
CPSF7-224ENST00000544990 HS3ST3A1Q9Y663 406 aa7.44□□□□□ -1.22
CPSF7-224ENST00000544990 EPN1Q9Y6I3 576 aaPredicted RBP7.44□□□□□ -1.22
CPSF7-224ENST00000544990 FRYLO94915 3013 aa7.44□□□□□ -1.22
CPSF7-224ENST00000544990 KNL1Q8NG31 2342 aa7.43□□□□□ -1.22
CPSF7-224ENST00000544990 ELOA3CA0A087WX78 387 aaPredicted RBP7.43□□□□□ -1.22
CPSF7-224ENST00000544990 A0A0A6YYK5 440 aaPredicted RBP7.43□□□□□ -1.22
CPSF7-224ENST00000544990 A0A1B0GTQ1 180 aa7.43□□□□□ -1.22
CPSF7-224ENST00000544990 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.43□□□□□ -1.22
CPSF7-224ENST00000544990 A0A1W2PQ67 120 aa7.43□□□□□ -1.22
CPSF7-224ENST00000544990 LRRD1A4D1F6 860 aa7.43□□□□□ -1.22
CPSF7-224ENST00000544990 ELOA3DA6NLF2 546 aaPredicted RBP7.43□□□□□ -1.22
CPSF7-224ENST00000544990 A6NNZ2 444 aa7.43□□□□□ -1.22
CPSF7-224ENST00000544990 ZNF487B1APH4 448 aa7.43□□□□□ -1.22
CPSF7-224ENST00000544990 H0Y8X5 98 aa7.43□□□□□ -1.22
CPSF7-224ENST00000544990 KCNK3O14649 394 aa7.43□□□□□ -1.22
CPSF7-224ENST00000544990 FPGTO14772 594 aa7.43□□□□□ -1.22
CPSF7-224ENST00000544990 WNT9AO14904 365 aa7.43□□□□□ -1.22
CPSF7-224ENST00000544990 INSIG1O15503 277 aa7.43□□□□□ -1.22
CPSF7-224ENST00000544990 SPOPO43791 374 aa7.43□□□□□ -1.22
CPSF7-224ENST00000544990 SH3BP5O60239 455 aa7.43□□□□□ -1.22
CPSF7-224ENST00000544990 PCDHGA12O60330 932 aa7.43□□□□□ -1.22
CPSF7-224ENST00000544990 MAFKO60675 156 aa7.43□□□□□ -1.22
CPSF7-224ENST00000544990 TM7SF2O76062 418 aa7.43□□□□□ -1.22
CPSF7-224ENST00000544990 NDUFA10O95299 355 aa7.43□□□□□ -1.22
CPSF7-224ENST00000544990 PIGNO95427 931 aa7.43□□□□□ -1.22
CPSF7-224ENST00000544990 PAK4O96013 591 aaPredicted RBP7.43□□□□□ -1.22
CPSF7-224ENST00000544990 THEGLP0DJG4 465 aa7.43□□□□□ -1.22
CPSF7-224ENST00000544990 PRLRP16471 622 aa7.43□□□□□ -1.22
CPSF7-224ENST00000544990 ZFXP17010 805 aaPredicted RBP7.43□□□□□ -1.22
CPSF7-224ENST00000544990 CCNCP24863 283 aa7.43□□□□□ -1.22
CPSF7-224ENST00000544990 NFKBIAP25963 317 aa7.43□□□□□ -1.22
CPSF7-224ENST00000544990 GARSP41250 739 aaKnown RBP7.43□□□□□ -1.22
CPSF7-224ENST00000544990 MMP13P45452 471 aa7.43□□□□□ -1.22
CPSF7-224ENST00000544990 HADHBP55084 474 aaKnown RBP7.43□□□□□ -1.22
CPSF7-224ENST00000544990 NXPH1P58417 271 aa7.43□□□□□ -1.22
CPSF7-224ENST00000544990 AP1S1P61966 158 aa7.43□□□□□ -1.22
CPSF7-224ENST00000544990 SLC10A7Q0GE19 358 aa7.43□□□□□ -1.22
CPSF7-224ENST00000544990 PAFAH1B3Q15102 231 aaKnown RBP7.43□□□□□ -1.22
CPSF7-224ENST00000544990 UGP2Q16851 508 aa7.43□□□□□ -1.22
CPSF7-224ENST00000544990 INAVAQ3KP66 663 aa7.43□□□□□ -1.22
CPSF7-224ENST00000544990 ELOA3BQ3SY89 546 aa7.43□□□□□ -1.22
CPSF7-224ENST00000544990 RALGPS1Q5JS13 557 aa7.43□□□□□ -1.22
CPSF7-224ENST00000544990 N4BP2L1Q5TBK1 243 aaPredicted RBP7.43□□□□□ -1.22
CPSF7-224ENST00000544990 SEL1L3Q68CR1 1132 aa7.43□□□□□ -1.22
CPSF7-224ENST00000544990 NCBP2-AS2Q69YL0 99 aa7.43□□□□□ -1.22
CPSF7-224ENST00000544990 ERAP2Q6P179 960 aa7.43□□□□□ -1.22
CPSF7-224ENST00000544990 DBX2Q6ZNG2 339 aa7.43□□□□□ -1.22
CPSF7-224ENST00000544990 CPNE8Q86YQ8 564 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms