RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 PNPOQ9NVS9 261 aa13.72□□□□□ -0.21
HCFC2-202ENST00000544223 TMEM51Q9NW97 253 aa13.72□□□□□ -0.21
HCFC2-202ENST00000544223 GALPQ9UBC7 116 aa13.72□□□□□ -0.21
HCFC2-202ENST00000544223 TLK1Q9UKI8 766 aa13.72□□□□□ -0.21
HCFC2-202ENST00000544223 ARHGAP26Q9UNA1 814 aa13.72□□□□□ -0.21
HCFC2-202ENST00000544223 MRPS23Q9Y3D9 190 aaKnown RBP13.72□□□□□ -0.21
HCFC2-202ENST00000544223 UBA6A0AVT1 1052 aaPredicted RBP13.71□□□□□ -0.21
HCFC2-202ENST00000544223 CD3EAPO15446 510 aaKnown RBP13.71□□□□□ -0.21
HCFC2-202ENST00000544223 EPHB1P54762 984 aa13.71□□□□□ -0.21
HCFC2-202ENST00000544223 CSE1LP55060 971 aaKnown RBP13.71□□□□□ -0.21
HCFC2-202ENST00000544223 CORO7P57737 925 aa13.71□□□□□ -0.21
HCFC2-202ENST00000544223 MTA1Q13330 715 aa13.71□□□□□ -0.21
HCFC2-202ENST00000544223 ITIH4Q14624 930 aa13.71□□□□□ -0.21
HCFC2-202ENST00000544223 MPPE1Q53F39 396 aa13.71□□□□□ -0.21
HCFC2-202ENST00000544223 PITRM1Q5JRX3 1037 aa13.71□□□□□ -0.21
HCFC2-202ENST00000544223 PRSS36Q5K4E3 855 aa13.71□□□□□ -0.21
HCFC2-202ENST00000544223 PSAPL1Q6NUJ1 521 aa13.71□□□□□ -0.21
HCFC2-202ENST00000544223 LYSMD3Q7Z3D4 306 aa13.71□□□□□ -0.21
HCFC2-202ENST00000544223 FSTL5Q8N475 847 aaPredicted RBP13.71□□□□□ -0.21
HCFC2-202ENST00000544223 KIF2BQ8N4N8 673 aa13.71□□□□□ -0.21
HCFC2-202ENST00000544223 HEXDCQ8WVB3 486 aa13.71□□□□□ -0.21
HCFC2-202ENST00000544223 EBF4Q9BQW3 602 aa13.71□□□□□ -0.21
HCFC2-202ENST00000544223 PRKD2Q9BZL6 878 aa13.71□□□□□ -0.21
HCFC2-202ENST00000544223 NKX2-4Q9H2Z4 354 aa13.71□□□□□ -0.21
HCFC2-202ENST00000544223 MRM3Q9HC36 420 aaKnown RBP13.71□□□□□ -0.21
HCFC2-202ENST00000544223 MYL2P10916 166 aa13.71□□□□□ -0.21
HCFC2-202ENST00000544223 CPA3P15088 417 aa13.71□□□□□ -0.21
HCFC2-202ENST00000544223 STMN1P16949 149 aa13.71□□□□□ -0.21
HCFC2-202ENST00000544223 RAB10P61026 200 aa13.71□□□□□ -0.21
HCFC2-202ENST00000544223 STX3Q13277 289 aa13.71□□□□□ -0.21
HCFC2-202ENST00000544223 DCAF4L2Q8NA75 395 aa13.71□□□□□ -0.21
HCFC2-202ENST00000544223 C2orf49Q9BVC5 232 aaPredicted RBP13.71□□□□□ -0.21
HCFC2-202ENST00000544223 TMEM120AQ9BXJ8 343 aa13.71□□□□□ -0.21
HCFC2-202ENST00000544223 CYP4F12Q9HCS2 524 aa13.71□□□□□ -0.21
HCFC2-202ENST00000544223 MKS1Q9NXB0 559 aa13.71□□□□□ -0.21
HCFC2-202ENST00000544223 ARMCX1Q9P291 453 aa13.71□□□□□ -0.21
HCFC2-202ENST00000544223 XPR1Q9UBH6 696 aa13.71□□□□□ -0.21
HCFC2-202ENST00000544223 FAM50BQ9Y247 325 aa13.71□□□□□ -0.21
HCFC2-202ENST00000544223 A0A0C4DFX4 3053 aa13.71□□□□□ -0.22
HCFC2-202ENST00000544223 GLP2RO95838 553 aa13.7□□□□□ -0.22
HCFC2-202ENST00000544223 CHRNGP07510 517 aa13.7□□□□□ -0.22
HCFC2-202ENST00000544223 DLDP09622 509 aaKnown RBP13.7□□□□□ -0.22
HCFC2-202ENST00000544223 SRCP12931 536 aa13.7□□□□□ -0.22
HCFC2-202ENST00000544223 FMO4P31512 558 aa13.7□□□□□ -0.22
HCFC2-202ENST00000544223 SCTRP47872 440 aa13.7□□□□□ -0.22
HCFC2-202ENST00000544223 KCNC1P48547 511 aa13.7□□□□□ -0.22
HCFC2-202ENST00000544223 ZNF140P52738 457 aaPredicted RBP13.7□□□□□ -0.22
HCFC2-202ENST00000544223 OCRLQ01968 901 aa13.7□□□□□ -0.22
HCFC2-202ENST00000544223 USP4Q13107 963 aa13.7□□□□□ -0.22
HCFC2-202ENST00000544223 FRG1Q14331 258 aaKnown RBP13.7□□□□□ -0.22
HCFC2-202ENST00000544223 KYAT3Q6YP21 454 aaKnown RBP13.7□□□□□ -0.22
HCFC2-202ENST00000544223 RFLNAQ6ZTI6 216 aa13.7□□□□□ -0.22
HCFC2-202ENST00000544223 Q6ZVU0 165 aa13.7□□□□□ -0.22
HCFC2-202ENST00000544223 NLRP9Q7RTR0 991 aa13.7□□□□□ -0.22
HCFC2-202ENST00000544223 TSPAN33Q86UF1 283 aa13.7□□□□□ -0.22
HCFC2-202ENST00000544223 C12orf40Q86WS4 652 aa13.7□□□□□ -0.22
HCFC2-202ENST00000544223 GPR65Q8IYL9 337 aa13.7□□□□□ -0.22
HCFC2-202ENST00000544223 ADGRG2Q8IZP9 1017 aa13.7□□□□□ -0.22
HCFC2-202ENST00000544223 CHST14Q8NCH0 376 aa13.7□□□□□ -0.22
HCFC2-202ENST00000544223 OR4L1Q8NH43 312 aa13.7□□□□□ -0.22
HCFC2-202ENST00000544223 FIBINQ8TAL6 211 aa13.7□□□□□ -0.22
HCFC2-202ENST00000544223 GRIN3AQ8TCU5 1115 aa13.7□□□□□ -0.22
HCFC2-202ENST00000544223 ACMSDQ8TDX5 336 aa13.7□□□□□ -0.22
HCFC2-202ENST00000544223 PTCD2Q8WV60 388 aaKnown RBP13.7□□□□□ -0.22
HCFC2-202ENST00000544223 SMG7Q92540 1137 aaKnown RBP13.7□□□□□ -0.22
HCFC2-202ENST00000544223 EXT2Q93063 718 aa13.7□□□□□ -0.22
HCFC2-202ENST00000544223 VOPP1Q96AW1 172 aa13.7□□□□□ -0.22
HCFC2-202ENST00000544223 PPP1R2P1Q96PQ5 205 aa13.7□□□□□ -0.22
HCFC2-202ENST00000544223 TMEM237Q96Q45 408 aa13.7□□□□□ -0.22
HCFC2-202ENST00000544223 MAFFQ9ULX9 164 aa13.7□□□□□ -0.22
HCFC2-202ENST00000544223 CAPN7Q9Y6W3 813 aa13.7□□□□□ -0.22
HCFC2-202ENST00000544223 IQCF5A8MTL0 148 aa13.7□□□□□ -0.22
HCFC2-202ENST00000544223 C5orf67F2Z3F1 127 aa13.7□□□□□ -0.22
HCFC2-202ENST00000544223 LINC01565O15544 149 aa13.7□□□□□ -0.22
HCFC2-202ENST00000544223 CBX6O95503 412 aa13.7□□□□□ -0.22
HCFC2-202ENST00000544223 CCDC166P0CW27 439 aa13.7□□□□□ -0.22
HCFC2-202ENST00000544223 KCNA5P22460 613 aa13.7□□□□□ -0.22
HCFC2-202ENST00000544223 SERPINB3P29508 390 aa13.7□□□□□ -0.22
HCFC2-202ENST00000544223 TIAL1Q01085 375 aaKnown RBP eCLIP13.7□□□□□ -0.22
HCFC2-202ENST00000544223 HECTD2Q5U5R9 776 aa13.7□□□□□ -0.22
HCFC2-202ENST00000544223 ZNF449Q6P9G9 518 aa13.7□□□□□ -0.22
HCFC2-202ENST00000544223 MICALL1Q8N3F8 863 aa13.7□□□□□ -0.22
HCFC2-202ENST00000544223 IRF7Q92985 503 aa13.7□□□□□ -0.22
HCFC2-202ENST00000544223 ISL2Q96A47 359 aa13.7□□□□□ -0.22
HCFC2-202ENST00000544223 GPR78Q96P69 363 aa13.7□□□□□ -0.22
HCFC2-202ENST00000544223 RANBP9Q96S59 729 aa13.7□□□□□ -0.22
HCFC2-202ENST00000544223 MFSD1Q9H3U5 465 aa13.7□□□□□ -0.22
HCFC2-202ENST00000544223 KIAA1522Q9P206 1035 aaPredicted RBP13.7□□□□□ -0.22
HCFC2-202ENST00000544223 ACOT9Q9Y305 439 aa13.7□□□□□ -0.22
HCFC2-202ENST00000544223 LAMA1P25391 3075 aa13.69□□□□□ -0.22
HCFC2-202ENST00000544223 RPP40O75818 363 aaKnown RBP13.69□□□□□ -0.22
HCFC2-202ENST00000544223 CLDN7O95471 211 aa13.69□□□□□ -0.22
HCFC2-202ENST00000544223 RALBP11234 206 aa13.69□□□□□ -0.22
HCFC2-202ENST00000544223 TARSP26639 723 aaKnown RBP13.69□□□□□ -0.22
HCFC2-202ENST00000544223 LEPRP48357 1165 aaKnown RBP13.69□□□□□ -0.22
HCFC2-202ENST00000544223 SLC1A6P48664 564 aa13.69□□□□□ -0.22
HCFC2-202ENST00000544223 CSRP3P50461 194 aa13.69□□□□□ -0.22
HCFC2-202ENST00000544223 EPHA5P54756 1037 aa13.69□□□□□ -0.22
HCFC2-202ENST00000544223 AQP5P55064 265 aa13.69□□□□□ -0.22
HCFC2-202ENST00000544223 RFTN1Q14699 578 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms