RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 MCCC1Q96RQ3 725 aaPredicted RBP23.33■■□□□ 1.33
CHFR-222ENST00000544093 KLF15Q9UIH9 416 aa23.33■■□□□ 1.33
CHFR-222ENST00000544093 TTLL3Q9Y4R7 772 aa23.33■■□□□ 1.33
CHFR-222ENST00000544093 EPN1Q9Y6I3 576 aaPredicted RBP23.33■■□□□ 1.33
CHFR-222ENST00000544093 USP24Q9UPU5 2620 aa23.33■■□□□ 1.33
CHFR-222ENST00000544093 PLXNB3Q9ULL4 1909 aa23.32■■□□□ 1.32
CHFR-222ENST00000544093 K7ESM1 405 aa23.32■■□□□ 1.32
CHFR-222ENST00000544093 CACNB4O00305 520 aaPredicted RBP23.32■■□□□ 1.32
CHFR-222ENST00000544093 HEXIM1O94992 359 aaKnown RBP23.32■■□□□ 1.32
CHFR-222ENST00000544093 PCCBP05166 539 aa23.32■■□□□ 1.32
CHFR-222ENST00000544093 HOXC4P09017 264 aaPredicted RBP23.32■■□□□ 1.32
CHFR-222ENST00000544093 GIMD1P0DJR0 217 aa23.32■■□□□ 1.32
CHFR-222ENST00000544093 NR2C2P49116 596 aa23.32■■□□□ 1.32
CHFR-222ENST00000544093 RPL26P61254 145 aaKnown RBP23.32■■□□□ 1.32
CHFR-222ENST00000544093 IFI35P80217 286 aaPredicted RBP23.32■■□□□ 1.32
CHFR-222ENST00000544093 SEMG2Q02383 582 aa23.32■■□□□ 1.32
CHFR-222ENST00000544093 ARHGEF7Q14155 803 aa23.32■■□□□ 1.32
CHFR-222ENST00000544093 FAXCQ5TGI0 409 aa23.32■■□□□ 1.32
CHFR-222ENST00000544093 ESRP1Q6NXG1 681 aaKnown RBP23.32■■□□□ 1.32
CHFR-222ENST00000544093 RFX6Q8HWS3 928 aa23.32■■□□□ 1.32
CHFR-222ENST00000544093 FSTL5Q8N475 847 aaPredicted RBP23.32■■□□□ 1.32
CHFR-222ENST00000544093 COQ10AQ96MF6 247 aa23.32■■□□□ 1.32
CHFR-222ENST00000544093 IL12RB2Q99665 862 aa23.32■■□□□ 1.32
CHFR-222ENST00000544093 SALL4Q9UJQ4 1053 aa23.32■■□□□ 1.32
CHFR-222ENST00000544093 RPL26L1Q9UNX3 145 aaKnown RBP23.32■■□□□ 1.32
CHFR-222ENST00000544093 KNTC1P50748 2209 aa23.32■■□□□ 1.32
CHFR-222ENST00000544093 PDE2AO00408 941 aaPredicted RBP23.31■■□□□ 1.32
CHFR-222ENST00000544093 FZD6O60353 706 aa23.31■■□□□ 1.32
CHFR-222ENST00000544093 RASGRP1O95267 797 aa23.31■■□□□ 1.32
CHFR-222ENST00000544093 GP1BAP07359 652 aa23.31■■□□□ 1.32
CHFR-222ENST00000544093 TNNT1P13805 278 aa23.31■■□□□ 1.32
CHFR-222ENST00000544093 EPHB1P54762 984 aa23.31■■□□□ 1.32
CHFR-222ENST00000544093 KIAA1024LP59773 190 aa23.31■■□□□ 1.32
CHFR-222ENST00000544093 CNGA3Q16281 694 aa23.31■■□□□ 1.32
CHFR-222ENST00000544093 PRRT3Q5FWE3 981 aa23.31■■□□□ 1.32
CHFR-222ENST00000544093 GAS2L3Q86XJ1 694 aa23.31■■□□□ 1.32
CHFR-222ENST00000544093 LMX1AQ8TE12 382 aa23.31■■□□□ 1.32
CHFR-222ENST00000544093 PIH1D2Q8WWB5 315 aa23.31■■□□□ 1.32
CHFR-222ENST00000544093 GLMNQ92990 594 aa23.31■■□□□ 1.32
CHFR-222ENST00000544093 RNF25Q96BH1 459 aaPredicted RBP23.31■■□□□ 1.32
CHFR-222ENST00000544093 NUS1Q96E22 293 aa23.31■■□□□ 1.32
CHFR-222ENST00000544093 APOLD1Q96LR9 279 aa23.31■■□□□ 1.32
CHFR-222ENST00000544093 WDR92Q96MX6 357 aa23.31■■□□□ 1.32
CHFR-222ENST00000544093 OLFM3Q96PB7 478 aa23.31■■□□□ 1.32
CHFR-222ENST00000544093 LGMNQ99538 433 aa23.31■■□□□ 1.32
CHFR-222ENST00000544093 TDRD1Q9BXT4 1180 aaKnown RBP23.31■■□□□ 1.32
CHFR-222ENST00000544093 CACNA1BQ00975 2339 aa23.31■■□□□ 1.32
CHFR-222ENST00000544093 ASPMQ8IZT6 3477 aa23.31■■□□□ 1.32
CHFR-222ENST00000544093 KMT2BQ9UMN6 2715 aaPredicted RBP23.31■■□□□ 1.32
CHFR-222ENST00000544093 LMO7DNF2Z398 122 aa23.3■■□□□ 1.32
CHFR-222ENST00000544093 HLA-DQB2P05538 268 aa23.3■■□□□ 1.32
CHFR-222ENST00000544093 ALPIP09923 528 aa23.3■■□□□ 1.32
CHFR-222ENST00000544093 ZNF30P17039 623 aa23.3■■□□□ 1.32
CHFR-222ENST00000544093 TRIM23P36406 574 aa23.3■■□□□ 1.32
CHFR-222ENST00000544093 HK3P52790 923 aa23.3■■□□□ 1.32
CHFR-222ENST00000544093 DSC2Q02487 901 aa23.3■■□□□ 1.32
CHFR-222ENST00000544093 ELOCQ15369 112 aa23.3■■□□□ 1.32
CHFR-222ENST00000544093 TAZQ16635 292 aa23.3■■□□□ 1.32
CHFR-222ENST00000544093 KDM7AQ6ZMT4 941 aa23.3■■□□□ 1.32
CHFR-222ENST00000544093 RAVER1Q8IY67 606 aaKnown RBP23.3■■□□□ 1.32
CHFR-222ENST00000544093 KATNAL2Q8IYT4 538 aa23.3■■□□□ 1.32
CHFR-222ENST00000544093 CACTIN-AS1Q8N1I8 211 aa23.3■■□□□ 1.32
CHFR-222ENST00000544093 TXLNBQ8N3L3 684 aa23.3■■□□□ 1.32
CHFR-222ENST00000544093 SCG3Q8WXD2 468 aaKnown RBP23.3■■□□□ 1.32
CHFR-222ENST00000544093 WDR26Q9H7D7 661 aa23.3■■□□□ 1.32
CHFR-222ENST00000544093 IMPACTQ9P2X3 320 aa23.3■■□□□ 1.32
CHFR-222ENST00000544093 KLQ9UEF7 1012 aa23.3■■□□□ 1.32
CHFR-222ENST00000544093 HYOU1Q9Y4L1 999 aa23.3■■□□□ 1.32
CHFR-222ENST00000544093 OR1A2Q9Y585 309 aa23.3■■□□□ 1.32
CHFR-222ENST00000544093 NPIPB15A6NHN6 443 aaPredicted RBP23.29■■□□□ 1.32
CHFR-222ENST00000544093 SOWAHDA6NJG2 315 aa23.29■■□□□ 1.32
CHFR-222ENST00000544093 A8MX80 341 aa23.29■■□□□ 1.32
CHFR-222ENST00000544093 KCNK1O00180 336 aa23.29■■□□□ 1.32
CHFR-222ENST00000544093 TNFRSF10CO14798 259 aa23.29■■□□□ 1.32
CHFR-222ENST00000544093 JCHAINP01591 159 aa23.29■■□□□ 1.32
CHFR-222ENST00000544093 TSHRP16473 764 aa23.29■■□□□ 1.32
CHFR-222ENST00000544093 CDKN2BP42772 138 aa23.29■■□□□ 1.32
CHFR-222ENST00000544093 AP1B1Q10567 949 aa23.29■■□□□ 1.32
CHFR-222ENST00000544093 TFDP3Q5H9I0 405 aa23.29■■□□□ 1.32
CHFR-222ENST00000544093 PNCKQ6P2M8 343 aa23.29■■□□□ 1.32
CHFR-222ENST00000544093 LVRNQ6Q4G3 990 aa23.29■■□□□ 1.32
CHFR-222ENST00000544093 ENPP7Q6UWV6 458 aa23.29■■□□□ 1.32
CHFR-222ENST00000544093 MFSD7Q6UXD7 560 aa23.29■■□□□ 1.32
CHFR-222ENST00000544093 RCOR2Q8IZ40 523 aa23.29■■□□□ 1.32
CHFR-222ENST00000544093 RBFAQ8N0V3 343 aa23.29■■□□□ 1.32
CHFR-222ENST00000544093 ARRDC2Q8TBH0 407 aa23.29■■□□□ 1.32
CHFR-222ENST00000544093 DTD2Q96FN9 168 aa23.29■■□□□ 1.32
CHFR-222ENST00000544093 RBM41Q96IZ5 413 aaKnown RBP23.29■■□□□ 1.32
CHFR-222ENST00000544093 LRRC61Q9BV99 259 aa23.29■■□□□ 1.32
CHFR-222ENST00000544093 DGKBQ9Y6T7 804 aa23.29■■□□□ 1.32
CHFR-222ENST00000544093 LRP4O75096 1905 aa23.28■■□□□ 1.32
CHFR-222ENST00000544093 A0A0J9YYE9 177 aa23.28■■□□□ 1.32
CHFR-222ENST00000544093 BTNL10A8MVZ5 291 aa23.28■■□□□ 1.32
CHFR-222ENST00000544093 ZRANB2O95218 330 aaKnown RBP eCLIP23.28■■□□□ 1.32
CHFR-222ENST00000544093 TRBC1P01850 177 aa23.28■■□□□ 1.32
CHFR-222ENST00000544093 ANXA6P08133 673 aa23.28■■□□□ 1.32
CHFR-222ENST00000544093 PDHA1P08559 390 aa23.28■■□□□ 1.32
CHFR-222ENST00000544093 CTSEP14091 401 aa23.28■■□□□ 1.32
CHFR-222ENST00000544093 JUPP14923 745 aa23.28■■□□□ 1.32
CHFR-222ENST00000544093 GM2AP17900 193 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms