RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 PMLP29590 882 aa5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 SLC26A3P40879 764 aa5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 RPL5P46777 297 aaKnown RBP5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 HSPA13P48723 471 aa5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 ATP4BP51164 291 aa5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 CLCN5P51795 746 aa5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 SH3BGRP55822 239 aaPredicted RBP5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 PSME3P61289 254 aa5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 MRPS6P82932 125 aaKnown RBP5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 PURAQ00577 322 aaKnown RBP5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 MYBPC1Q00872 1141 aa5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 TRAP1Q12931 704 aaKnown RBP5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 ART3Q13508 389 aa5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 TRIM25Q14258 630 aaKnown RBP5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 SQLEQ14534 574 aa5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 MAPRE2Q15555 327 aa5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 CNGA3Q16281 694 aa5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 PDCD2Q16342 344 aaPredicted RBP5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 RBM20Q5T481 1227 aaKnown RBP5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 AP1ARQ63HQ0 302 aa5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 NXNQ6DKJ4 435 aa5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 ZNF470Q6ECI4 717 aa5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 TIGD7Q6NT04 549 aaPredicted RBP5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 NEPROQ6NW34 567 aa5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 TAF2Q6P1X5 1199 aa5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 HACD2Q6Y1H2 254 aa5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 CYHR1Q6ZMK1 362 aa5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 AGMOQ6ZNB7 445 aa5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 SATL1Q86VE3 508 aa5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 ATCAYQ86WG3 371 aa5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 ALDH16A1Q8IZ83 802 aa5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 RTL3Q8N8U3 475 aaKnown RBP5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 TADA1Q96BN2 335 aa5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 LENG1Q96BZ8 264 aaPredicted RBP5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 DGCR14Q96DF8 476 aaKnown RBP5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 ELMO2Q96JJ3 720 aa5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 PPP1R36Q96LQ0 422 aa5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 PARK7Q99497 189 aaKnown RBP5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 NPAS2Q99743 824 aa5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 OLFM1Q99784 485 aa5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 PTPN18Q99952 460 aa5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 PAAF1Q9BRP4 392 aa5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 KATNAL1Q9BW62 490 aa5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 MRPS26Q9BYN8 205 aaKnown RBP5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 TGIF2Q9GZN2 237 aa5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 RBM38Q9H0Z9 239 aaKnown RBP5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 TRPV6Q9H1D0 765 aa5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 SLC25A51Q9H1U9 297 aa5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 POMKQ9H5K3 350 aa5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 NOL6Q9H6R4 1146 aaKnown RBP5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 SUDS3Q9H7L9 328 aaPredicted RBP5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 CATSPERBQ9H7T0 1116 aa5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 VCX3AQ9NNX9 186 aa5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 MRPL40Q9NQ50 206 aaKnown RBP5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 ABCC13Q9NSE7 274 aa5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 NDFIP2Q9NV92 336 aa5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 TBC1D13Q9NVG8 400 aa5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 TMLHEQ9NVH6 421 aa5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 RBM22Q9NW64 420 aaKnown RBP eCLIP5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 CD300AQ9UGN4 299 aa5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 G3BP2Q9UN86 482 aaKnown RBP5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 ST3GAL5Q9UNP4 418 aa5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 AP4B1Q9Y6B7 739 aa5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 TCRBV3S1A0A5B6 114 aa5.21□□□□□ -1.57
ATPAF1-212ENST00000542495 CCDC78A2IDD5 438 aa5.21□□□□□ -1.57
ATPAF1-212ENST00000542495 HEATR9A2RTY3 570 aa5.21□□□□□ -1.57
ATPAF1-212ENST00000542495 NEMP2A6NFY4 417 aa5.21□□□□□ -1.57
ATPAF1-212ENST00000542495 MROH6A6NGR9 719 aa5.21□□□□□ -1.57
ATPAF1-212ENST00000542495 A6NJY4 79 aa5.21□□□□□ -1.57
ATPAF1-212ENST00000542495 E7ENX8 843 aa5.21□□□□□ -1.57
ATPAF1-212ENST00000542495 PDLIM1O00151 329 aa5.21□□□□□ -1.57
ATPAF1-212ENST00000542495 TXNDC9O14530 226 aa5.21□□□□□ -1.57
ATPAF1-212ENST00000542495 AURKAO14965 403 aa5.21□□□□□ -1.57
ATPAF1-212ENST00000542495 CFLARO15519 480 aa5.21□□□□□ -1.57
ATPAF1-212ENST00000542495 ZNF623O75123 536 aa5.21□□□□□ -1.57
ATPAF1-212ENST00000542495 IPO13O94829 963 aaKnown RBP5.21□□□□□ -1.57
ATPAF1-212ENST00000542495 TNFAIP8O95379 198 aa5.21□□□□□ -1.57
ATPAF1-212ENST00000542495 MYL3P08590 195 aa5.21□□□□□ -1.57
ATPAF1-212ENST00000542495 RBP1P09455 135 aa5.21□□□□□ -1.57
ATPAF1-212ENST00000542495 LTA4HP09960 611 aaKnown RBP5.21□□□□□ -1.57
ATPAF1-212ENST00000542495 ODC1P11926 461 aa5.21□□□□□ -1.57
ATPAF1-212ENST00000542495 BDNFP23560 247 aa5.21□□□□□ -1.57
ATPAF1-212ENST00000542495 CCR1P32246 355 aa5.21□□□□□ -1.57
ATPAF1-212ENST00000542495 MSX2P35548 267 aaPredicted RBP5.21□□□□□ -1.57
ATPAF1-212ENST00000542495 RGS2P41220 211 aa5.21□□□□□ -1.57
ATPAF1-212ENST00000542495 CHRNA4P43681 627 aa5.21□□□□□ -1.57
ATPAF1-212ENST00000542495 ACADVLP49748 655 aa5.21□□□□□ -1.57
ATPAF1-212ENST00000542495 SCNN1GP51170 649 aa5.21□□□□□ -1.57
ATPAF1-212ENST00000542495 ZNF157P51786 506 aaPredicted RBP5.21□□□□□ -1.57
ATPAF1-212ENST00000542495 MLLT6P55198 1093 aaPredicted RBP5.21□□□□□ -1.57
ATPAF1-212ENST00000542495 WNT3AP56704 352 aa5.21□□□□□ -1.57
ATPAF1-212ENST00000542495 FKBP1BP68106 108 aa5.21□□□□□ -1.57
ATPAF1-212ENST00000542495 CDKL1Q00532 357 aa5.21□□□□□ -1.57
ATPAF1-212ENST00000542495 NFKB2Q00653 900 aa5.21□□□□□ -1.57
ATPAF1-212ENST00000542495 RHDQ02161 417 aa5.21□□□□□ -1.57
ATPAF1-212ENST00000542495 ILF2Q12905 390 aaKnown RBP5.21□□□□□ -1.57
ATPAF1-212ENST00000542495 STX5Q13190 355 aa5.21□□□□□ -1.57
ATPAF1-212ENST00000542495 ACAP2Q15057 778 aa5.21□□□□□ -1.57
ATPAF1-212ENST00000542495 FAM83EQ2M2I3 478 aa5.21□□□□□ -1.57
ATPAF1-212ENST00000542495 MGAT5BQ3V5L5 792 aa5.21□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 154.2 ms