RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 MANEALQ5VSG8 457 aa12.33□□□□□ -0.44
NPC1-202ENST00000540608 CLEC6AQ6EIG7 209 aa12.33□□□□□ -0.44
NPC1-202ENST00000540608 GALNT7Q86SF2 657 aa12.33□□□□□ -0.44
NPC1-202ENST00000540608 FIBCD1Q8N539 461 aa12.33□□□□□ -0.44
NPC1-202ENST00000540608 DIS3LQ8TF46 1054 aaKnown RBP12.33□□□□□ -0.44
NPC1-202ENST00000540608 BIRC8Q96P09 236 aa12.33□□□□□ -0.44
NPC1-202ENST00000540608 HOPXQ9BPY8 73 aaPredicted RBP12.33□□□□□ -0.44
NPC1-202ENST00000540608 TRIM62Q9BVG3 475 aa12.33□□□□□ -0.44
NPC1-202ENST00000540608 TUBA8Q9NY65 449 aaPredicted RBP12.33□□□□□ -0.44
NPC1-202ENST00000540608 CEP350Q5VT06 3117 aa12.33□□□□□ -0.44
NPC1-202ENST00000540608 TANC1Q9C0D5 1861 aa12.33□□□□□ -0.44
NPC1-202ENST00000540608 HAS3O00219 553 aa12.33□□□□□ -0.44
NPC1-202ENST00000540608 AKAP10O43572 662 aa12.33□□□□□ -0.44
NPC1-202ENST00000540608 PAGE1O75459 146 aa12.33□□□□□ -0.44
NPC1-202ENST00000540608 WISP3O95389 354 aaPredicted RBP12.33□□□□□ -0.44
NPC1-202ENST00000540608 MYL3P08590 195 aa12.33□□□□□ -0.44
NPC1-202ENST00000540608 PCSK1P29120 753 aa12.33□□□□□ -0.44
NPC1-202ENST00000540608 SLC26A3P40879 764 aa12.33□□□□□ -0.44
NPC1-202ENST00000540608 GRIA3P42263 894 aa12.33□□□□□ -0.44
NPC1-202ENST00000540608 ADARP55265 1226 aaKnown RBP12.33□□□□□ -0.44
NPC1-202ENST00000540608 FAM110CQ1W6H9 321 aa12.33□□□□□ -0.44
NPC1-202ENST00000540608 UGT3A2Q3SY77 523 aa12.33□□□□□ -0.44
NPC1-202ENST00000540608 ARTNQ5T4W7 220 aa12.33□□□□□ -0.44
NPC1-202ENST00000540608 AFMIDQ63HM1 303 aa12.33□□□□□ -0.44
NPC1-202ENST00000540608 KDELC1Q6UW63 502 aa12.33□□□□□ -0.44
NPC1-202ENST00000540608 CLYBLQ8N0X4 340 aa12.33□□□□□ -0.44
NPC1-202ENST00000540608 MFSD2AQ8NA29 543 aa12.33□□□□□ -0.44
NPC1-202ENST00000540608 MYLPFQ96A32 169 aa12.33□□□□□ -0.44
NPC1-202ENST00000540608 C19orf60Q96EN9 201 aa12.33□□□□□ -0.44
NPC1-202ENST00000540608 SLC39A3Q9BRY0 314 aa12.33□□□□□ -0.44
NPC1-202ENST00000540608 FBRSL1Q9HCM7 1045 aaKnown RBP12.33□□□□□ -0.44
NPC1-202ENST00000540608 NDFIP2Q9NV92 336 aa12.33□□□□□ -0.44
NPC1-202ENST00000540608 ATP6AP2A0A1C7CYW4 349 aa12.32□□□□□ -0.44
NPC1-202ENST00000540608 AQP12BA6NM10 295 aa12.32□□□□□ -0.44
NPC1-202ENST00000540608 IRAK2O43187 625 aa12.32□□□□□ -0.44
NPC1-202ENST00000540608 ATP6AP2O75787 350 aa12.32□□□□□ -0.44
NPC1-202ENST00000540608 SUPT7LO94864 414 aa12.32□□□□□ -0.44
NPC1-202ENST00000540608 PAPSS2O95340 614 aaPredicted RBP12.32□□□□□ -0.44
NPC1-202ENST00000540608 ALDOCP09972 364 aaKnown RBP12.32□□□□□ -0.44
NPC1-202ENST00000540608 ATP6V1B2P21281 511 aa12.32□□□□□ -0.44
NPC1-202ENST00000540608 KCNC1P48547 511 aa12.32□□□□□ -0.44
NPC1-202ENST00000540608 GPR162Q16538 588 aa12.32□□□□□ -0.44
NPC1-202ENST00000540608 PCSK7Q16549 785 aa12.32□□□□□ -0.44
NPC1-202ENST00000540608 UNC50Q53HI1 259 aa12.32□□□□□ -0.44
NPC1-202ENST00000540608 PITRM1Q5JRX3 1037 aa12.32□□□□□ -0.44
NPC1-202ENST00000540608 INTS11Q5TA45 600 aaKnown RBP12.32□□□□□ -0.44
NPC1-202ENST00000540608 PRMT9Q6P2P2 845 aa12.32□□□□□ -0.44
NPC1-202ENST00000540608 TMEM207Q6UWW9 146 aa12.32□□□□□ -0.44
NPC1-202ENST00000540608 ISCA2Q86U28 154 aa12.32□□□□□ -0.44
NPC1-202ENST00000540608 RETREG3Q86VR2 466 aa12.32□□□□□ -0.44
NPC1-202ENST00000540608 CAMK1DQ8IU85 385 aa12.32□□□□□ -0.44
NPC1-202ENST00000540608 CILP2Q8IUL8 1156 aa12.32□□□□□ -0.44
NPC1-202ENST00000540608 LRRC49Q8IUZ0 686 aa12.32□□□□□ -0.44
NPC1-202ENST00000540608 AQP12AQ8IXF9 295 aa12.32□□□□□ -0.44
NPC1-202ENST00000540608 FAM47BQ8NA70 645 aa12.32□□□□□ -0.44
NPC1-202ENST00000540608 C3orf58Q8NDZ4 430 aa12.32□□□□□ -0.44
NPC1-202ENST00000540608 C3orf30Q96M34 536 aa12.32□□□□□ -0.44
NPC1-202ENST00000540608 SLC25A51Q9H1U9 297 aa12.32□□□□□ -0.44
NPC1-202ENST00000540608 ALG9Q9H6U8 611 aa12.32□□□□□ -0.44
NPC1-202ENST00000540608 AKTIPQ9H8T0 292 aa12.32□□□□□ -0.44
NPC1-202ENST00000540608 ATP13A1Q9HD20 1204 aa12.32□□□□□ -0.44
NPC1-202ENST00000540608 MAP10Q9P2G4 905 aa12.32□□□□□ -0.44
NPC1-202ENST00000540608 ABCD2Q9UBJ2 740 aa12.32□□□□□ -0.44
NPC1-202ENST00000540608 TRIM64CA6NLI5 447 aa12.32□□□□□ -0.44
NPC1-202ENST00000540608 PFDN1O60925 122 aa12.32□□□□□ -0.44
NPC1-202ENST00000540608 ZNF865P0CJ78 1059 aaPredicted RBP12.32□□□□□ -0.44
NPC1-202ENST00000540608 SERPINH1P50454 418 aaKnown RBP12.32□□□□□ -0.44
NPC1-202ENST00000540608 KCTD21Q4G0X4 260 aa12.32□□□□□ -0.44
NPC1-202ENST00000540608 NOMO2Q5JPE7 1267 aa12.32□□□□□ -0.44
NPC1-202ENST00000540608 FCRL2Q96LA5 508 aaPredicted RBP12.32□□□□□ -0.44
NPC1-202ENST00000540608 TRIM15Q9C019 465 aa12.32□□□□□ -0.44
NPC1-202ENST00000540608 VPS45Q9NRW7 570 aa12.32□□□□□ -0.44
NPC1-202ENST00000540608 GMPR2Q9P2T1 348 aaKnown RBP12.32□□□□□ -0.44
NPC1-202ENST00000540608 PTBP2Q9UKA9 531 aaKnown RBP12.32□□□□□ -0.44
NPC1-202ENST00000540608 NDUFAF1Q9Y375 327 aa12.32□□□□□ -0.44
NPC1-202ENST00000540608 A0A087WXM4 84 aa12.31□□□□□ -0.44
NPC1-202ENST00000540608 A0A0J9YYE9 177 aa12.31□□□□□ -0.44
NPC1-202ENST00000540608 MT-CO1P00395 513 aa12.31□□□□□ -0.44
NPC1-202ENST00000540608 THP07101 528 aa12.31□□□□□ -0.44
NPC1-202ENST00000540608 FGF4P08620 206 aa12.31□□□□□ -0.44
NPC1-202ENST00000540608 TSPAN8P19075 237 aa12.31□□□□□ -0.44
NPC1-202ENST00000540608 BDNFP23560 247 aa12.31□□□□□ -0.44
NPC1-202ENST00000540608 CCR1P32246 355 aa12.31□□□□□ -0.44
NPC1-202ENST00000540608 ATP6V0D1P61421 351 aa12.31□□□□□ -0.44
NPC1-202ENST00000540608 NFKB2Q00653 900 aa12.31□□□□□ -0.44
NPC1-202ENST00000540608 LPIN1Q14693 890 aa12.31□□□□□ -0.44
NPC1-202ENST00000540608 FAM171BQ6P995 826 aa12.31□□□□□ -0.44
NPC1-202ENST00000540608 DHRS4L2Q6PKH6 230 aa12.31□□□□□ -0.44
NPC1-202ENST00000540608 MINDY1Q8N5J2 469 aa12.31□□□□□ -0.44
NPC1-202ENST00000540608 GOLM1Q8NBJ4 401 aa12.31□□□□□ -0.44
NPC1-202ENST00000540608 OR13J1Q8NGT2 312 aa12.31□□□□□ -0.44
NPC1-202ENST00000540608 ADAMTS16Q8TE57 1224 aa12.31□□□□□ -0.44
NPC1-202ENST00000540608 RTP3Q9BQQ7 232 aa12.31□□□□□ -0.44
NPC1-202ENST00000540608 LIN28AQ9H9Z2 209 aaKnown RBP12.31□□□□□ -0.44
NPC1-202ENST00000540608 DOCK3Q8IZD9 2030 aa12.31□□□□□ -0.44
NPC1-202ENST00000540608 C17orf102A2RUQ5 167 aa12.31□□□□□ -0.44
NPC1-202ENST00000540608 NME4O00746 187 aa12.31□□□□□ -0.44
NPC1-202ENST00000540608 DLGAP1O14490 977 aa12.31□□□□□ -0.44
NPC1-202ENST00000540608 SLC7A4O43246 635 aa12.31□□□□□ -0.44
NPC1-202ENST00000540608 S1PR4O95977 384 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms