RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 ACOX1Q15067 660 aa22.27■■□□□ 1.16
SCARB1-206ENST00000539320 CNGA3Q16281 694 aa22.27■■□□□ 1.16
SCARB1-206ENST00000539320 ISXQ2M1V0 245 aa22.27■■□□□ 1.16
SCARB1-206ENST00000539320 MARC1Q5VT66 337 aa22.27■■□□□ 1.16
SCARB1-206ENST00000539320 LVRNQ6Q4G3 990 aa22.27■■□□□ 1.16
SCARB1-206ENST00000539320 RBM44Q6ZP01 1051 aaKnown RBP22.27■■□□□ 1.16
SCARB1-206ENST00000539320 NYAP1Q6ZVC0 841 aa22.27■■□□□ 1.16
SCARB1-206ENST00000539320 GKN2Q86XP6 184 aa22.27■■□□□ 1.16
SCARB1-206ENST00000539320 COL27A1Q8IZC6 1860 aaPredicted RBP22.27■■□□□ 1.16
SCARB1-206ENST00000539320 SDR16C5Q8N3Y7 309 aa22.27■■□□□ 1.16
SCARB1-206ENST00000539320 KYQ8NBH2 561 aa22.27■■□□□ 1.16
SCARB1-206ENST00000539320 FUBP1Q96AE4 644 aaKnown RBP22.27■■□□□ 1.16
SCARB1-206ENST00000539320 WDR26Q9H7D7 661 aa22.27■■□□□ 1.16
SCARB1-206ENST00000539320 FGF22Q9HCT0 170 aa22.27■■□□□ 1.16
SCARB1-206ENST00000539320 CTTNBP2NLQ9P2B4 639 aa22.27■■□□□ 1.16
SCARB1-206ENST00000539320 UVRAGQ9P2Y5 699 aa22.27■■□□□ 1.16
SCARB1-206ENST00000539320 PADI4Q9UM07 663 aa22.27■■□□□ 1.16
SCARB1-206ENST00000539320 DGKBQ9Y6T7 804 aa22.27■■□□□ 1.16
SCARB1-206ENST00000539320 A8MX80 341 aa22.26■■□□□ 1.15
SCARB1-206ENST00000539320 TCEA3O75764 348 aa22.26■■□□□ 1.15
SCARB1-206ENST00000539320 PROSCO94903 275 aa22.26■■□□□ 1.15
SCARB1-206ENST00000539320 TNFP01375 233 aa22.26■■□□□ 1.15
SCARB1-206ENST00000539320 MPOP05164 745 aa22.26■■□□□ 1.15
SCARB1-206ENST00000539320 IL4RP24394 825 aa22.26■■□□□ 1.15
SCARB1-206ENST00000539320 ITPKBP27987 946 aa22.26■■□□□ 1.15
SCARB1-206ENST00000539320 ARSEP51690 589 aa22.26■■□□□ 1.15
SCARB1-206ENST00000539320 TRIM14Q14142 442 aa22.26■■□□□ 1.15
SCARB1-206ENST00000539320 DPYSL3Q14195 570 aa22.26■■□□□ 1.15
SCARB1-206ENST00000539320 KCTD16Q68DU8 428 aa22.26■■□□□ 1.15
SCARB1-206ENST00000539320 CPNE8Q86YQ8 564 aa22.26■■□□□ 1.15
SCARB1-206ENST00000539320 LRRC49Q8IUZ0 686 aa22.26■■□□□ 1.15
SCARB1-206ENST00000539320 OR56A4Q8NGH8 313 aa22.26■■□□□ 1.15
SCARB1-206ENST00000539320 WDR48Q8TAF3 677 aa22.26■■□□□ 1.15
SCARB1-206ENST00000539320 CTNNBL1Q8WYA6 563 aaPredicted RBP22.26■■□□□ 1.15
SCARB1-206ENST00000539320 OR1E3Q8WZA6 343 aa22.26■■□□□ 1.15
SCARB1-206ENST00000539320 NUS1Q96E22 293 aa22.26■■□□□ 1.15
SCARB1-206ENST00000539320 CRELD1Q96HD1 420 aa22.26■■□□□ 1.15
SCARB1-206ENST00000539320 COQ10AQ96MF6 247 aa22.26■■□□□ 1.15
SCARB1-206ENST00000539320 ZNF670Q9BS34 389 aa22.26■■□□□ 1.15
SCARB1-206ENST00000539320 SIRPGQ9P1W8 387 aa22.26■■□□□ 1.15
SCARB1-206ENST00000539320 GULP1Q9UBP9 304 aa22.26■■□□□ 1.15
SCARB1-206ENST00000539320 GPR34Q9UPC5 381 aa22.26■■□□□ 1.15
SCARB1-206ENST00000539320 TMEM202A6NGA9 273 aa22.25■■□□□ 1.15
SCARB1-206ENST00000539320 HEXIM1O94992 359 aaKnown RBP22.25■■□□□ 1.15
SCARB1-206ENST00000539320 HOXC4P09017 264 aaPredicted RBP22.25■■□□□ 1.15
SCARB1-206ENST00000539320 H2AFZP0C0S5 128 aa22.25■■□□□ 1.15
SCARB1-206ENST00000539320 CYP2A6P11509 494 aaPredicted RBP22.25■■□□□ 1.15
SCARB1-206ENST00000539320 NCBP2-AS2Q69YL0 99 aa22.25■■□□□ 1.15
SCARB1-206ENST00000539320 H2AFVQ71UI9 128 aa22.25■■□□□ 1.15
SCARB1-206ENST00000539320 GRAMD1AQ96CP6 724 aa22.25■■□□□ 1.15
SCARB1-206ENST00000539320 RBM15Q96T37 977 aaKnown RBP eCLIP22.25■■□□□ 1.15
SCARB1-206ENST00000539320 CCDC3Q9BQI4 270 aa22.25■■□□□ 1.15
SCARB1-206ENST00000539320 PACSIN1Q9BY11 444 aa22.25■■□□□ 1.15
SCARB1-206ENST00000539320 POLR1BQ9H9Y6 1135 aa22.25■■□□□ 1.15
SCARB1-206ENST00000539320 NT5MQ9NPB1 228 aa22.25■■□□□ 1.15
SCARB1-206ENST00000539320 PHTF1Q9UMS5 762 aa22.25■■□□□ 1.15
SCARB1-206ENST00000539320 CBFA2T2O43439 604 aa22.24■■□□□ 1.15
SCARB1-206ENST00000539320 DXOO77932 396 aaKnown RBP22.24■■□□□ 1.15
SCARB1-206ENST00000539320 PGLSO95336 258 aa22.24■■□□□ 1.15
SCARB1-206ENST00000539320 TRIM23P36406 574 aa22.24■■□□□ 1.15
SCARB1-206ENST00000539320 GARSP41250 739 aaKnown RBP22.24■■□□□ 1.15
SCARB1-206ENST00000539320 LSSP48449 732 aa22.24■■□□□ 1.15
SCARB1-206ENST00000539320 GALNT2Q10471 571 aa22.24■■□□□ 1.15
SCARB1-206ENST00000539320 PAFAH1B3Q15102 231 aaKnown RBP22.24■■□□□ 1.15
SCARB1-206ENST00000539320 SLC18A3Q16572 532 aa22.24■■□□□ 1.15
SCARB1-206ENST00000539320 ARMC12Q5T9G4 340 aa22.24■■□□□ 1.15
SCARB1-206ENST00000539320 USP45Q70EL2 814 aa22.24■■□□□ 1.15
SCARB1-206ENST00000539320 LSMEM2Q8N112 164 aa22.24■■□□□ 1.15
SCARB1-206ENST00000539320 PELI3Q8N2H9 469 aa22.24■■□□□ 1.15
SCARB1-206ENST00000539320 TEX26Q8N6G2 289 aa22.24■■□□□ 1.15
SCARB1-206ENST00000539320 DTD2Q96FN9 168 aa22.24■■□□□ 1.15
SCARB1-206ENST00000539320 ZNF578Q96N58 590 aaPredicted RBP22.24■■□□□ 1.15
SCARB1-206ENST00000539320 SYNDIG1Q9H7V2 258 aa22.24■■□□□ 1.15
SCARB1-206ENST00000539320 KCTD5Q9NXV2 234 aa22.24■■□□□ 1.15
SCARB1-206ENST00000539320 LCMT1Q9UIC8 334 aa22.24■■□□□ 1.15
SCARB1-206ENST00000539320 TNFRSF10CO14798 259 aa22.23■■□□□ 1.15
SCARB1-206ENST00000539320 LHCGRP22888 699 aa22.23■■□□□ 1.15
SCARB1-206ENST00000539320 PCBP4P57723 403 aaKnown RBP22.23■■□□□ 1.15
SCARB1-206ENST00000539320 SPIDRQ14159 915 aa22.23■■□□□ 1.15
SCARB1-206ENST00000539320 PDK2Q15119 407 aa22.23■■□□□ 1.15
SCARB1-206ENST00000539320 ATP13A4Q4VNC1 1196 aa22.23■■□□□ 1.15
SCARB1-206ENST00000539320 DENND2CQ68D51 928 aa22.23■■□□□ 1.15
SCARB1-206ENST00000539320 SPECC1LQ69YQ0 1117 aa22.23■■□□□ 1.15
SCARB1-206ENST00000539320 PNCKQ6P2M8 343 aa22.23■■□□□ 1.15
SCARB1-206ENST00000539320 CCDC74AQ96AQ1 378 aa22.23■■□□□ 1.15
SCARB1-206ENST00000539320 ATXN7L3BQ96GX2 97 aa22.23■■□□□ 1.15
SCARB1-206ENST00000539320 MCCC1Q96RQ3 725 aaPredicted RBP22.23■■□□□ 1.15
SCARB1-206ENST00000539320 DNAJC7Q99615 494 aa22.23■■□□□ 1.15
SCARB1-206ENST00000539320 SEMA3CQ99985 751 aa22.23■■□□□ 1.15
SCARB1-206ENST00000539320 POLR1EQ9GZS1 481 aaKnown RBP22.23■■□□□ 1.15
SCARB1-206ENST00000539320 DEF6Q9H4E7 631 aa22.23■■□□□ 1.15
SCARB1-206ENST00000539320 MRPL40Q9NQ50 206 aaKnown RBP22.23■■□□□ 1.15
SCARB1-206ENST00000539320 ENTPD2Q9Y5L3 495 aa22.23■■□□□ 1.15
SCARB1-206ENST00000539320 SSU72P8A0A1W2PR75 194 aa22.22■■□□□ 1.15
SCARB1-206ENST00000539320 NPIPB15A6NHN6 443 aaPredicted RBP22.22■■□□□ 1.15
SCARB1-206ENST00000539320 PSMD11O00231 422 aa22.22■■□□□ 1.15
SCARB1-206ENST00000539320 PDE2AO00408 941 aaPredicted RBP22.22■■□□□ 1.15
SCARB1-206ENST00000539320 KRT7P08729 469 aa22.22■■□□□ 1.15
SCARB1-206ENST00000539320 MYCLP1P12525 358 aaPredicted RBP22.22■■□□□ 1.15
SCARB1-206ENST00000539320 MAN1A1P33908 653 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms