RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 NEMP1O14524 444 aa23.55■■□□□ 1.36
TMEM260-202ENST00000538838 SLC7A4O43246 635 aa23.55■■□□□ 1.36
TMEM260-202ENST00000538838 PLRG1O43660 514 aaKnown RBP23.55■■□□□ 1.36
TMEM260-202ENST00000538838 NFKBIAP25963 317 aa23.55■■□□□ 1.36
TMEM260-202ENST00000538838 TNFRSF8P28908 595 aa23.55■■□□□ 1.36
TMEM260-202ENST00000538838 NPY2RP49146 381 aa23.55■■□□□ 1.36
TMEM260-202ENST00000538838 CCDC15Q0P6D6 951 aa23.55■■□□□ 1.36
TMEM260-202ENST00000538838 CDKN3Q16667 212 aa23.55■■□□□ 1.36
TMEM260-202ENST00000538838 LRRC66Q68CR7 880 aa23.55■■□□□ 1.36
TMEM260-202ENST00000538838 GLT6D1Q7Z4J2 308 aa23.55■■□□□ 1.36
TMEM260-202ENST00000538838 CCDC25Q86WR0 208 aa23.55■■□□□ 1.36
TMEM260-202ENST00000538838 GPR161Q8N6U8 529 aaKnown RBP23.55■■□□□ 1.36
TMEM260-202ENST00000538838 OR14C36Q8NHC7 312 aa23.55■■□□□ 1.36
TMEM260-202ENST00000538838 RLN3Q8WXF3 142 aa23.55■■□□□ 1.36
TMEM260-202ENST00000538838 FMO2Q99518 471 aa23.55■■□□□ 1.36
TMEM260-202ENST00000538838 WRAP53Q9BUR4 548 aaKnown RBP23.55■■□□□ 1.36
TMEM260-202ENST00000538838 BPTFQ12830 3046 aa23.55■■□□□ 1.36
TMEM260-202ENST00000538838 ZNF106Q9H2Y7 1883 aaKnown RBP23.55■■□□□ 1.36
TMEM260-202ENST00000538838 AP1G1O43747 822 aa23.55■■□□□ 1.36
TMEM260-202ENST00000538838 IGLV3-19P01714 112 aa23.55■■□□□ 1.36
TMEM260-202ENST00000538838 TDGF1P13385 188 aa23.55■■□□□ 1.36
TMEM260-202ENST00000538838 AVPR2P30518 371 aa23.55■■□□□ 1.36
TMEM260-202ENST00000538838 CNGA3Q16281 694 aa23.55■■□□□ 1.36
TMEM260-202ENST00000538838 HP1BP3Q5SSJ5 553 aaPredicted RBP23.55■■□□□ 1.36
TMEM260-202ENST00000538838 MAML2Q8IZL2 1156 aaPredicted RBP23.55■■□□□ 1.36
TMEM260-202ENST00000538838 TTC30BQ8N4P2 665 aa23.55■■□□□ 1.36
TMEM260-202ENST00000538838 IL22Q9GZX6 179 aa23.55■■□□□ 1.36
TMEM260-202ENST00000538838 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP23.55■■□□□ 1.36
TMEM260-202ENST00000538838 HACD3Q9P035 362 aa23.55■■□□□ 1.36
TMEM260-202ENST00000538838 MTRF1LQ9UGC7 380 aaKnown RBP23.55■■□□□ 1.36
TMEM260-202ENST00000538838 ARL5AQ9Y689 179 aa23.55■■□□□ 1.36
TMEM260-202ENST00000538838 CCDC78A2IDD5 438 aa23.54■■□□□ 1.36
TMEM260-202ENST00000538838 AXIN1O15169 862 aa23.54■■□□□ 1.36
TMEM260-202ENST00000538838 BUD23O43709 281 aaKnown RBP23.54■■□□□ 1.36
TMEM260-202ENST00000538838 CLDN7O95471 211 aa23.54■■□□□ 1.36
TMEM260-202ENST00000538838 ACSL1P33121 698 aa23.54■■□□□ 1.36
TMEM260-202ENST00000538838 PDIA2Q13087 525 aaKnown RBP23.54■■□□□ 1.36
TMEM260-202ENST00000538838 DNAJC21Q5F1R6 531 aaKnown RBP23.54■■□□□ 1.36
TMEM260-202ENST00000538838 FRMD1Q8N878 549 aa23.54■■□□□ 1.36
TMEM260-202ENST00000538838 BRSK1Q8TDC3 778 aa23.54■■□□□ 1.36
TMEM260-202ENST00000538838 SIGLEC10Q96LC7 697 aa23.54■■□□□ 1.36
TMEM260-202ENST00000538838 WDR83Q9BRX9 315 aaKnown RBP23.54■■□□□ 1.36
TMEM260-202ENST00000538838 GPR63Q9BZJ6 419 aa23.54■■□□□ 1.36
TMEM260-202ENST00000538838 PRR23AA6NEV1 266 aa23.53■■□□□ 1.36
TMEM260-202ENST00000538838 SDR42E2A6NKP2 422 aa23.53■■□□□ 1.36
TMEM260-202ENST00000538838 E7ESA3 106 aa23.53■■□□□ 1.36
TMEM260-202ENST00000538838 ZNF217O75362 1048 aa23.53■■□□□ 1.36
TMEM260-202ENST00000538838 ARHGEF7Q14155 803 aa23.53■■□□□ 1.36
TMEM260-202ENST00000538838 FASTKD3Q14CZ7 662 aaKnown RBP23.53■■□□□ 1.36
TMEM260-202ENST00000538838 TMEM52BQ4KMG9 183 aa23.53■■□□□ 1.36
TMEM260-202ENST00000538838 WDR93Q6P2C0 686 aa23.53■■□□□ 1.36
TMEM260-202ENST00000538838 CASC4Q6P4E1 433 aa23.53■■□□□ 1.36
TMEM260-202ENST00000538838 CENPUQ71F23 418 aa23.53■■□□□ 1.36
TMEM260-202ENST00000538838 FAM160A2Q8N612 972 aaPredicted RBP23.53■■□□□ 1.36
TMEM260-202ENST00000538838 PPHLN1Q8NEY8 458 aaKnown RBP23.53■■□□□ 1.36
TMEM260-202ENST00000538838 MYRIPQ8NFW9 859 aa23.53■■□□□ 1.36
TMEM260-202ENST00000538838 EID2BQ96D98 161 aa23.53■■□□□ 1.36
TMEM260-202ENST00000538838 SRPK1Q96SB4 655 aaKnown RBP23.53■■□□□ 1.36
TMEM260-202ENST00000538838 TRIM56Q9BRZ2 755 aaKnown RBP23.53■■□□□ 1.36
TMEM260-202ENST00000538838 PARD6BQ9BYG5 372 aa23.53■■□□□ 1.36
TMEM260-202ENST00000538838 BTBD1Q9H0C5 482 aa23.53■■□□□ 1.36
TMEM260-202ENST00000538838 TRABDQ9H4I3 376 aa23.53■■□□□ 1.36
TMEM260-202ENST00000538838 ZFYVE1Q9HBF4 777 aa23.53■■□□□ 1.36
TMEM260-202ENST00000538838 SAYSD1Q9NPB0 183 aa23.53■■□□□ 1.36
TMEM260-202ENST00000538838 TCAF1Q9Y4C2 921 aa23.53■■□□□ 1.36
TMEM260-202ENST00000538838 KCTD3Q9Y597 815 aa23.53■■□□□ 1.36
TMEM260-202ENST00000538838 PLXNA2O75051 1894 aa23.53■■□□□ 1.36
TMEM260-202ENST00000538838 DOCK9Q9BZ29 2069 aa23.53■■□□□ 1.36
TMEM260-202ENST00000538838 IGHV1OR15-9A0A0B4J2B8 117 aa23.52■■□□□ 1.36
TMEM260-202ENST00000538838 FAM47DPA6NHR8 397 aa23.52■■□□□ 1.36
TMEM260-202ENST00000538838 LDB2O43679 373 aa23.52■■□□□ 1.36
TMEM260-202ENST00000538838 PCDH8O95206 1070 aa23.52■■□□□ 1.36
TMEM260-202ENST00000538838 ELFN1P0C7U0 828 aa23.52■■□□□ 1.36
TMEM260-202ENST00000538838 HOXA6P31267 233 aa23.52■■□□□ 1.36
TMEM260-202ENST00000538838 LIG3P49916 1009 aa23.52■■□□□ 1.36
TMEM260-202ENST00000538838 CSTF1Q05048 431 aaKnown RBP23.52■■□□□ 1.36
TMEM260-202ENST00000538838 TAF1AQ15573 450 aaPredicted RBP23.52■■□□□ 1.36
TMEM260-202ENST00000538838 MAP7D1Q3KQU3 841 aa23.52■■□□□ 1.36
TMEM260-202ENST00000538838 PCID2Q5JVF3 399 aa23.52■■□□□ 1.36
TMEM260-202ENST00000538838 ANKMY2Q8IV38 441 aa23.52■■□□□ 1.36
TMEM260-202ENST00000538838 RANBP9Q96S59 729 aa23.52■■□□□ 1.36
TMEM260-202ENST00000538838 FOXP3Q9BZS1 431 aa23.52■■□□□ 1.36
TMEM260-202ENST00000538838 SAMD15Q9P1V8 674 aa23.52■■□□□ 1.36
TMEM260-202ENST00000538838 CHMP2BQ9UQN3 213 aa23.52■■□□□ 1.36
TMEM260-202ENST00000538838 INVSQ9Y283 1065 aa23.52■■□□□ 1.36
TMEM260-202ENST00000538838 MAD1L1Q9Y6D9 718 aa23.52■■□□□ 1.36
TMEM260-202ENST00000538838 TRPM6Q9BX84 2022 aa23.52■■□□□ 1.36
TMEM260-202ENST00000538838 HEATR9A2RTY3 570 aa23.51■■□□□ 1.35
TMEM260-202ENST00000538838 GOLGA8CPA6NN73 597 aa23.51■■□□□ 1.35
TMEM260-202ENST00000538838 TSPAN6O43657 245 aa23.51■■□□□ 1.35
TMEM260-202ENST00000538838 MMP20O60882 483 aa23.51■■□□□ 1.35
TMEM260-202ENST00000538838 CRTAMO95727 393 aa23.51■■□□□ 1.35
TMEM260-202ENST00000538838 C1SP09871 688 aa23.51■■□□□ 1.35
TMEM260-202ENST00000538838 ZNF30P17039 623 aa23.51■■□□□ 1.35
TMEM260-202ENST00000538838 ADRA1DP25100 572 aa23.51■■□□□ 1.35
TMEM260-202ENST00000538838 ELK3P41970 407 aa23.51■■□□□ 1.35
TMEM260-202ENST00000538838 FNTBP49356 437 aa23.51■■□□□ 1.35
TMEM260-202ENST00000538838 PTPRCAPQ14761 206 aa23.51■■□□□ 1.35
TMEM260-202ENST00000538838 LIPIQ6XZB0 460 aa23.51■■□□□ 1.35
TMEM260-202ENST00000538838 CCNI2Q6ZMN8 369 aaPredicted RBP23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms