RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 F8W810 466 aa5.85□□□□□ -1.47
CLIP1-207ENST00000536634 SYT5O00445 386 aa5.85□□□□□ -1.47
CLIP1-207ENST00000536634 MBTPS2O43462 519 aa5.85□□□□□ -1.47
CLIP1-207ENST00000536634 SKAP2O75563 359 aaPredicted RBP5.85□□□□□ -1.47
CLIP1-207ENST00000536634 ALDOAP04075 364 aaKnown RBP5.85□□□□□ -1.47
CLIP1-207ENST00000536634 WNT1P04628 370 aa5.85□□□□□ -1.47
CLIP1-207ENST00000536634 CYP3A4P08684 503 aa5.85□□□□□ -1.47
CLIP1-207ENST00000536634 GRK5P34947 590 aa5.85□□□□□ -1.47
CLIP1-207ENST00000536634 ADD2P35612 726 aa5.85□□□□□ -1.47
CLIP1-207ENST00000536634 ME1P48163 572 aa5.85□□□□□ -1.47
CLIP1-207ENST00000536634 PNLIPRP1P54315 467 aa5.85□□□□□ -1.47
CLIP1-207ENST00000536634 BRD3Q15059 726 aa5.85□□□□□ -1.47
CLIP1-207ENST00000536634 PTGISQ16647 500 aa5.85□□□□□ -1.47
CLIP1-207ENST00000536634 ZNF260Q3ZCT1 412 aa5.85□□□□□ -1.47
CLIP1-207ENST00000536634 AACSQ86V21 672 aa5.85□□□□□ -1.47
CLIP1-207ENST00000536634 TMEM57Q8N5G2 664 aa5.85□□□□□ -1.47
CLIP1-207ENST00000536634 VPS37AQ8NEZ2 397 aa5.85□□□□□ -1.47
CLIP1-207ENST00000536634 OR52N4Q8NGI2 321 aa5.85□□□□□ -1.47
CLIP1-207ENST00000536634 ARHGAP45Q92619 1136 aa5.85□□□□□ -1.47
CLIP1-207ENST00000536634 MSI2Q96DH6 328 aaKnown RBP5.85□□□□□ -1.47
CLIP1-207ENST00000536634 VCPIP1Q96JH7 1222 aa5.85□□□□□ -1.47
CLIP1-207ENST00000536634 MPHOSPH6Q99547 160 aaKnown RBP5.85□□□□□ -1.47
CLIP1-207ENST00000536634 UPF3BQ9BZI7 483 aaKnown RBP5.85□□□□□ -1.47
CLIP1-207ENST00000536634 ERVK-5Q9HDB9 667 aa5.85□□□□□ -1.47
CLIP1-207ENST00000536634 ZBTB40Q9NUA8 1239 aa5.85□□□□□ -1.47
CLIP1-207ENST00000536634 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.85□□□□□ -1.47
CLIP1-207ENST00000536634 NYAP2Q9P242 653 aa5.85□□□□□ -1.47
CLIP1-207ENST00000536634 TAGLN3Q9UI15 199 aa5.85□□□□□ -1.47
CLIP1-207ENST00000536634 NFU1Q9UMS0 254 aa5.85□□□□□ -1.47
CLIP1-207ENST00000536634 HS3ST3B1Q9Y662 390 aa5.85□□□□□ -1.47
CLIP1-207ENST00000536634 LAMA5O15230 3695 aa5.84□□□□□ -1.47
CLIP1-207ENST00000536634 OTOGLQ3ZCN5 2332 aa5.84□□□□□ -1.47
CLIP1-207ENST00000536634 PRR23AA6NEV1 266 aa5.84□□□□□ -1.47
CLIP1-207ENST00000536634 ZNF814B7Z6K7 855 aa5.84□□□□□ -1.47
CLIP1-207ENST00000536634 LINC01565O15544 149 aa5.84□□□□□ -1.47
CLIP1-207ENST00000536634 TLX3O43711 291 aaPredicted RBP5.84□□□□□ -1.47
CLIP1-207ENST00000536634 PRDM1O75626 825 aa5.84□□□□□ -1.47
CLIP1-207ENST00000536634 CSPG5O95196 566 aa5.84□□□□□ -1.47
CLIP1-207ENST00000536634 FGF2P09038 288 aa5.84□□□□□ -1.47
CLIP1-207ENST00000536634 ALDOCP09972 364 aaKnown RBP5.84□□□□□ -1.47
CLIP1-207ENST00000536634 TMEM191BP0C7N4 346 aa5.84□□□□□ -1.47
CLIP1-207ENST00000536634 TNFRSF1BP20333 461 aa5.84□□□□□ -1.47
CLIP1-207ENST00000536634 TGM2P21980 687 aa5.84□□□□□ -1.47
CLIP1-207ENST00000536634 RNASELQ05823 741 aaKnown RBP5.84□□□□□ -1.47
CLIP1-207ENST00000536634 HYAL1Q12794 435 aa5.84□□□□□ -1.47
CLIP1-207ENST00000536634 GPM6BQ13491 265 aa5.84□□□□□ -1.47
CLIP1-207ENST00000536634 SUGP1Q8IWZ8 645 aaKnown RBP5.84□□□□□ -1.47
CLIP1-207ENST00000536634 MYOCDQ8IZQ8 938 aa5.84□□□□□ -1.47
CLIP1-207ENST00000536634 GMCL1P1Q8NEA9 526 aa5.84□□□□□ -1.47
CLIP1-207ENST00000536634 POF1BQ8WVV4 589 aa5.84□□□□□ -1.47
CLIP1-207ENST00000536634 HMGB4Q8WW32 186 aa5.84□□□□□ -1.47
CLIP1-207ENST00000536634 ATOH1Q92858 354 aaPredicted RBP5.84□□□□□ -1.47
CLIP1-207ENST00000536634 EME1Q96AY2 570 aa5.84□□□□□ -1.47
CLIP1-207ENST00000536634 EID2BQ96D98 161 aa5.84□□□□□ -1.47
CLIP1-207ENST00000536634 RTKNQ9BST9 563 aa5.84□□□□□ -1.47
CLIP1-207ENST00000536634 TUBB6Q9BUF5 446 aa5.84□□□□□ -1.47
CLIP1-207ENST00000536634 IL1RAPL2Q9NP60 686 aa5.84□□□□□ -1.47
CLIP1-207ENST00000536634 CTNNA3Q9UI47 895 aa5.84□□□□□ -1.47
CLIP1-207ENST00000536634 UTS2RQ9UKP6 389 aa5.84□□□□□ -1.47
CLIP1-207ENST00000536634 AGO2Q9UKV8 859 aaKnown RBP5.84□□□□□ -1.47
CLIP1-207ENST00000536634 DAPP1Q9UN19 280 aa5.84□□□□□ -1.47
CLIP1-207ENST00000536634 EXOC6BQ9Y2D4 811 aa5.84□□□□□ -1.47
CLIP1-207ENST00000536634 SLC4A4Q9Y6R1 1079 aa5.84□□□□□ -1.47
CLIP1-207ENST00000536634 GPR179Q6PRD1 2367 aa5.84□□□□□ -1.48
CLIP1-207ENST00000536634 CYP3A7-CYP3A51PA0A087WV96 503 aa5.83□□□□□ -1.48
CLIP1-207ENST00000536634 MED19A0JLT2 244 aaPredicted RBP5.83□□□□□ -1.48
CLIP1-207ENST00000536634 PROB1E7EW31 1015 aa5.83□□□□□ -1.48
CLIP1-207ENST00000536634 F5H423 210 aaPredicted RBP5.83□□□□□ -1.48
CLIP1-207ENST00000536634 ACKR2O00590 384 aa5.83□□□□□ -1.48
CLIP1-207ENST00000536634 PDGFBP01127 241 aaPredicted RBP5.83□□□□□ -1.48
CLIP1-207ENST00000536634 LINC00271P0C7V0 271 aa5.83□□□□□ -1.48
CLIP1-207ENST00000536634 PSG1P11464 419 aa5.83□□□□□ -1.48
CLIP1-207ENST00000536634 CYP3A7P24462 503 aa5.83□□□□□ -1.48
CLIP1-207ENST00000536634 SERPINF1P36955 418 aa5.83□□□□□ -1.48
CLIP1-207ENST00000536634 STAT2P52630 851 aa5.83□□□□□ -1.48
CLIP1-207ENST00000536634 BAATQ14032 418 aaPredicted RBP5.83□□□□□ -1.48
CLIP1-207ENST00000536634 PPP2R5BQ15173 497 aa5.83□□□□□ -1.48
CLIP1-207ENST00000536634 ZNF569Q5MCW4 686 aa5.83□□□□□ -1.48
CLIP1-207ENST00000536634 RPAP2Q8IXW5 612 aaPredicted RBP5.83□□□□□ -1.48
CLIP1-207ENST00000536634 SAMD3Q8N6K7 520 aa5.83□□□□□ -1.48
CLIP1-207ENST00000536634 SCAMP5Q8TAC9 235 aa5.83□□□□□ -1.48
CLIP1-207ENST00000536634 RSC1A1Q92681 617 aa5.83□□□□□ -1.48
CLIP1-207ENST00000536634 ATP2A3Q93084 1043 aa5.83□□□□□ -1.48
CLIP1-207ENST00000536634 RMDN3Q96TC7 470 aa5.83□□□□□ -1.48
CLIP1-207ENST00000536634 FSD1Q9BTV5 496 aa5.83□□□□□ -1.48
CLIP1-207ENST00000536634 AAMDCQ9H7C9 122 aa5.83□□□□□ -1.48
CLIP1-207ENST00000536634 SFXN1Q9H9B4 322 aa5.83□□□□□ -1.48
CLIP1-207ENST00000536634 MLXIPQ9HAP2 919 aa5.83□□□□□ -1.48
CLIP1-207ENST00000536634 SEPSECSQ9HD40 501 aaKnown RBP5.83□□□□□ -1.48
CLIP1-207ENST00000536634 LRFN1Q9P244 771 aa5.83□□□□□ -1.48
CLIP1-207ENST00000536634 IPO11Q9UI26 975 aaKnown RBP5.83□□□□□ -1.48
CLIP1-207ENST00000536634 ISY1Q9ULR0 285 aaKnown RBP5.83□□□□□ -1.48
CLIP1-207ENST00000536634 PLIN4Q96Q06 1357 aa5.82□□□□□ -1.48
CLIP1-207ENST00000536634 ZFYVE26Q68DK2 2539 aa5.82□□□□□ -1.48
CLIP1-207ENST00000536634 PKD1L2Q7Z442 2459 aa5.82□□□□□ -1.48
CLIP1-207ENST00000536634 TBC1D3DA0A087WVF3 549 aa5.82□□□□□ -1.48
CLIP1-207ENST00000536634 TBC1D3IA0A087WXS9 549 aa5.82□□□□□ -1.48
CLIP1-207ENST00000536634 TBC1D3EA0A087X179 549 aa5.82□□□□□ -1.48
CLIP1-207ENST00000536634 TBC1D3KA0A087X1G2 549 aa5.82□□□□□ -1.48
CLIP1-207ENST00000536634 KIR2DS5A0A0G2JLQ3 304 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms