RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 RTKNQ9BST9 563 aa13.42□□□□□ -0.26
VPS33B-202ENST00000535906 AFF4Q9UHB7 1163 aaKnown RBP13.42□□□□□ -0.26
VPS33B-202ENST00000535906 C2orf78A6NCI8 922 aa13.41□□□□□ -0.26
VPS33B-202ENST00000535906 TMEM233B4DJY2 109 aa13.41□□□□□ -0.26
VPS33B-202ENST00000535906 ABLIM3O94929 683 aa13.41□□□□□ -0.26
VPS33B-202ENST00000535906 ATP5F1P24539 256 aaPredicted RBP13.41□□□□□ -0.26
VPS33B-202ENST00000535906 KPNA2P52292 529 aaKnown RBP13.41□□□□□ -0.26
VPS33B-202ENST00000535906 CUL3Q13618 768 aa13.41□□□□□ -0.26
VPS33B-202ENST00000535906 SEMA3AQ14563 771 aa13.41□□□□□ -0.26
VPS33B-202ENST00000535906 ARHGEF6Q15052 776 aa13.41□□□□□ -0.26
VPS33B-202ENST00000535906 IZUMO2Q6UXV1 221 aa13.41□□□□□ -0.26
VPS33B-202ENST00000535906 PIM3Q86V86 326 aa13.41□□□□□ -0.26
VPS33B-202ENST00000535906 KDM1BQ8NB78 822 aa13.41□□□□□ -0.26
VPS33B-202ENST00000535906 PDCD6IPQ8WUM4 868 aaKnown RBP13.41□□□□□ -0.26
VPS33B-202ENST00000535906 GATA6Q92908 595 aa13.41□□□□□ -0.26
VPS33B-202ENST00000535906 PSKH2Q96QS6 385 aa13.41□□□□□ -0.26
VPS33B-202ENST00000535906 ECSITQ9BQ95 431 aa13.41□□□□□ -0.26
VPS33B-202ENST00000535906 CYP4F11Q9HBI6 524 aa13.41□□□□□ -0.26
VPS33B-202ENST00000535906 CYP4F12Q9HCS2 524 aa13.41□□□□□ -0.26
VPS33B-202ENST00000535906 NCKIPSDQ9NZQ3 722 aa13.41□□□□□ -0.26
VPS33B-202ENST00000535906 DLGAP2Q9P1A6 1054 aa13.41□□□□□ -0.26
VPS33B-202ENST00000535906 SCOCQ9UIL1 159 aa13.41□□□□□ -0.26
VPS33B-202ENST00000535906 CCDC162PA2VCL2 907 aa13.41□□□□□ -0.26
VPS33B-202ENST00000535906 KDELR3O43731 214 aa13.41□□□□□ -0.26
VPS33B-202ENST00000535906 NPHS1O60500 1241 aa13.41□□□□□ -0.26
VPS33B-202ENST00000535906 TSPAN3O60637 253 aa13.41□□□□□ -0.26
VPS33B-202ENST00000535906 PDE5AO76074 875 aa13.41□□□□□ -0.26
VPS33B-202ENST00000535906 WISP3O95389 354 aaPredicted RBP13.41□□□□□ -0.26
VPS33B-202ENST00000535906 IRF1P10914 325 aa13.41□□□□□ -0.26
VPS33B-202ENST00000535906 HNRNPLP14866 589 aaKnown RBP eCLIP13.41□□□□□ -0.26
VPS33B-202ENST00000535906 SP100P23497 879 aaPredicted RBP13.41□□□□□ -0.26
VPS33B-202ENST00000535906 SCNN1BP51168 640 aa13.41□□□□□ -0.26
VPS33B-202ENST00000535906 DNAJB13P59910 316 aa13.41□□□□□ -0.26
VPS33B-202ENST00000535906 PFKPQ01813 784 aa13.41□□□□□ -0.26
VPS33B-202ENST00000535906 CCNIQ14094 377 aa13.41□□□□□ -0.26
VPS33B-202ENST00000535906 GPR158Q5T848 1215 aa13.41□□□□□ -0.26
VPS33B-202ENST00000535906 RPS27LQ71UM5 84 aaKnown RBP13.41□□□□□ -0.26
VPS33B-202ENST00000535906 FBXW8Q8N3Y1 598 aa13.41□□□□□ -0.26
VPS33B-202ENST00000535906 PYDC1Q8WXC3 89 aa13.41□□□□□ -0.26
VPS33B-202ENST00000535906 TSPAN17Q96FV3 270 aa13.41□□□□□ -0.26
VPS33B-202ENST00000535906 CNDP1Q96KN2 507 aa13.41□□□□□ -0.26
VPS33B-202ENST00000535906 LENG8Q96PV6 779 aaPredicted RBP13.41□□□□□ -0.26
VPS33B-202ENST00000535906 TRPM5Q9NZQ8 1165 aa13.41□□□□□ -0.26
VPS33B-202ENST00000535906 UBA2Q9UBT2 640 aaPredicted RBP13.41□□□□□ -0.26
VPS33B-202ENST00000535906 SEPT3Q9UH03 358 aa13.41□□□□□ -0.26
VPS33B-202ENST00000535906 POMPQ9Y244 141 aa13.41□□□□□ -0.26
VPS33B-202ENST00000535906 MAGEA13PA6NCF6 341 aa13.4□□□□□ -0.26
VPS33B-202ENST00000535906 A8MT66 165 aa13.4□□□□□ -0.26
VPS33B-202ENST00000535906 CD3EAPO15446 510 aaKnown RBP13.4□□□□□ -0.26
VPS33B-202ENST00000535906 CLDN11O75508 207 aa13.4□□□□□ -0.26
VPS33B-202ENST00000535906 NDST3O95803 873 aa13.4□□□□□ -0.26
VPS33B-202ENST00000535906 GLP2RO95838 553 aa13.4□□□□□ -0.26
VPS33B-202ENST00000535906 SERPINB5P36952 375 aa13.4□□□□□ -0.26
VPS33B-202ENST00000535906 KCNC1P48547 511 aa13.4□□□□□ -0.26
VPS33B-202ENST00000535906 PLK1P53350 603 aa13.4□□□□□ -0.26
VPS33B-202ENST00000535906 OXCT1P55809 520 aa13.4□□□□□ -0.26
VPS33B-202ENST00000535906 NSUN2Q08J23 767 aaKnown RBP eCLIP13.4□□□□□ -0.26
VPS33B-202ENST00000535906 TBL3Q12788 808 aaKnown RBP13.4□□□□□ -0.26
VPS33B-202ENST00000535906 ASPHQ12797 758 aa13.4□□□□□ -0.26
VPS33B-202ENST00000535906 ACAP2Q15057 778 aa13.4□□□□□ -0.26
VPS33B-202ENST00000535906 PDCD2Q16342 344 aaPredicted RBP13.4□□□□□ -0.26
VPS33B-202ENST00000535906 ZNF549Q6P9A3 640 aa13.4□□□□□ -0.26
VPS33B-202ENST00000535906 C16orf59Q7L2K0 433 aa13.4□□□□□ -0.26
VPS33B-202ENST00000535906 PIWIL4Q7Z3Z4 852 aaKnown RBP13.4□□□□□ -0.26
VPS33B-202ENST00000535906 TMCO2Q7Z6W1 182 aaPredicted RBP13.4□□□□□ -0.26
VPS33B-202ENST00000535906 DHDDSQ86SQ9 333 aa13.4□□□□□ -0.26
VPS33B-202ENST00000535906 STON2Q8WXE9 905 aa13.4□□□□□ -0.26
VPS33B-202ENST00000535906 PLD4Q96BZ4 506 aa13.4□□□□□ -0.26
VPS33B-202ENST00000535906 MYRFLQ96LU7 910 aa13.4□□□□□ -0.26
VPS33B-202ENST00000535906 NR1H4Q96RI1 486 aaPredicted RBP13.4□□□□□ -0.26
VPS33B-202ENST00000535906 CINPQ9BW66 212 aaPredicted RBP13.4□□□□□ -0.26
VPS33B-202ENST00000535906 VTI1BQ9UEU0 232 aa13.4□□□□□ -0.26
VPS33B-202ENST00000535906 AGO1Q9UL18 857 aaKnown RBP13.4□□□□□ -0.26
VPS33B-202ENST00000535906 G3BP2Q9UN86 482 aaKnown RBP13.4□□□□□ -0.26
VPS33B-202ENST00000535906 SSX2IPQ9Y2D8 614 aa13.4□□□□□ -0.26
VPS33B-202ENST00000535906 SLCO1B7G3V0H7 640 aa13.4□□□□□ -0.26
VPS33B-202ENST00000535906 RPP40O75818 363 aaKnown RBP13.4□□□□□ -0.26
VPS33B-202ENST00000535906 IPO13O94829 963 aaKnown RBP13.4□□□□□ -0.26
VPS33B-202ENST00000535906 SORBS2O94875 1100 aaKnown RBP13.4□□□□□ -0.26
VPS33B-202ENST00000535906 PRSS56P0CW18 603 aa13.4□□□□□ -0.26
VPS33B-202ENST00000535906 MTTPP55157 894 aa13.4□□□□□ -0.26
VPS33B-202ENST00000535906 TIAL1Q01085 375 aaKnown RBP eCLIP13.4□□□□□ -0.26
VPS33B-202ENST00000535906 CDC16Q13042 620 aa13.4□□□□□ -0.26
VPS33B-202ENST00000535906 PLD1Q13393 1074 aa13.4□□□□□ -0.26
VPS33B-202ENST00000535906 SH2D4BQ5SQS7 431 aa13.4□□□□□ -0.26
VPS33B-202ENST00000535906 ADGRF1Q5T601 910 aa13.4□□□□□ -0.26
VPS33B-202ENST00000535906 TMEM198Q66K66 360 aa13.4□□□□□ -0.26
VPS33B-202ENST00000535906 KLC3Q6P597 504 aa13.4□□□□□ -0.26
VPS33B-202ENST00000535906 FAM43BQ6ZT52 329 aaPredicted RBP13.4□□□□□ -0.26
VPS33B-202ENST00000535906 ANKRD33Q7Z3H0 272 aa13.4□□□□□ -0.26
VPS33B-202ENST00000535906 BBS5Q8N3I7 341 aa13.4□□□□□ -0.26
VPS33B-202ENST00000535906 SLC26A7Q8TE54 656 aa13.4□□□□□ -0.26
VPS33B-202ENST00000535906 PEX13Q92968 403 aa13.4□□□□□ -0.26
VPS33B-202ENST00000535906 VWCEQ96DN2 955 aa13.4□□□□□ -0.26
VPS33B-202ENST00000535906 PHF21BQ96EK2 531 aa13.4□□□□□ -0.26
VPS33B-202ENST00000535906 RETREG1Q9H6L5 497 aa13.4□□□□□ -0.26
VPS33B-202ENST00000535906 OGDHLQ9ULD0 1010 aa13.4□□□□□ -0.26
VPS33B-202ENST00000535906 SPO11Q9Y5K1 396 aa13.4□□□□□ -0.26
VPS33B-202ENST00000535906 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.39□□□□□ -0.27
VPS33B-202ENST00000535906 ILVBLA1L0T0 632 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms