RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 C16orf96A6NNT2 1141 aa3.48□□□□□ -1.85
SNHG1-202ENST00000535689 NPIPB5A8MRT5 1133 aa3.48□□□□□ -1.85
SNHG1-202ENST00000535689 TEX22C9J3V5 150 aa3.48□□□□□ -1.85
SNHG1-202ENST00000535689 NPIPB4C9JG80 1138 aa3.48□□□□□ -1.85
SNHG1-202ENST00000535689 J3KRW8 73 aa3.48□□□□□ -1.85
SNHG1-202ENST00000535689 KIR2DS3K7RE56 304 aa3.48□□□□□ -1.85
SNHG1-202ENST00000535689 RHODO00212 210 aa3.48□□□□□ -1.85
SNHG1-202ENST00000535689 DHX16O60231 1041 aaKnown RBP3.48□□□□□ -1.85
SNHG1-202ENST00000535689 ENTPD3O75355 529 aa3.48□□□□□ -1.85
SNHG1-202ENST00000535689 TMCC1O94876 653 aa3.48□□□□□ -1.85
SNHG1-202ENST00000535689 TMEM63AO94886 807 aa3.48□□□□□ -1.85
SNHG1-202ENST00000535689 LATS1O95835 1130 aa3.48□□□□□ -1.85
SNHG1-202ENST00000535689 SYF2O95926 243 aaKnown RBP3.48□□□□□ -1.85
SNHG1-202ENST00000535689 KLKB1P03952 638 aa3.48□□□□□ -1.85
SNHG1-202ENST00000535689 POLBP06746 335 aa3.48□□□□□ -1.85
SNHG1-202ENST00000535689 FCGR2AP12318 317 aa3.48□□□□□ -1.85
SNHG1-202ENST00000535689 CKMT1AP12532 417 aa3.48□□□□□ -1.85
SNHG1-202ENST00000535689 ACP5P13686 325 aa3.48□□□□□ -1.85
SNHG1-202ENST00000535689 ENO3P13929 434 aaPredicted RBP3.48□□□□□ -1.85
SNHG1-202ENST00000535689 COX7A2P14406 83 aa3.48□□□□□ -1.85
SNHG1-202ENST00000535689 ZNF8P17098 575 aaPredicted RBP3.48□□□□□ -1.85
SNHG1-202ENST00000535689 PPP2R1AP30153 589 aa3.48□□□□□ -1.85
SNHG1-202ENST00000535689 HOXA7P31268 230 aaPredicted RBP3.48□□□□□ -1.85
SNHG1-202ENST00000535689 IDUAP35475 653 aa3.48□□□□□ -1.85
SNHG1-202ENST00000535689 HNF1BP35680 557 aa3.48□□□□□ -1.85
SNHG1-202ENST00000535689 TMPOP42166 694 aaKnown RBP3.48□□□□□ -1.85
SNHG1-202ENST00000535689 EIF3BP55884 814 aaKnown RBP3.48□□□□□ -1.85
SNHG1-202ENST00000535689 FAM3BP58499 235 aaPredicted RBP3.48□□□□□ -1.85
SNHG1-202ENST00000535689 B4GALNT1Q00973 533 aa3.48□□□□□ -1.85
SNHG1-202ENST00000535689 TFF2Q03403 129 aa3.48□□□□□ -1.85
SNHG1-202ENST00000535689 ZNF91Q05481 1191 aa3.48□□□□□ -1.85
SNHG1-202ENST00000535689 SRSF4Q08170 494 aaKnown RBP3.48□□□□□ -1.85
SNHG1-202ENST00000535689 GOLGA8DPQ0D2H9 430 aa3.48□□□□□ -1.85
SNHG1-202ENST00000535689 PPIGQ13427 754 aaKnown RBP eCLIP3.48□□□□□ -1.85
SNHG1-202ENST00000535689 SEC23BQ15437 767 aa3.48□□□□□ -1.85
SNHG1-202ENST00000535689 MAPRE1Q15691 268 aaKnown RBP3.48□□□□□ -1.85
SNHG1-202ENST00000535689 EPHA10Q5JZY3 1008 aa3.48□□□□□ -1.85
SNHG1-202ENST00000535689 KRTAP5-3Q6L8H2 238 aa3.48□□□□□ -1.85
SNHG1-202ENST00000535689 DPY19L2P1Q6NXN4 242 aa3.48□□□□□ -1.85
SNHG1-202ENST00000535689 SLC30A9Q6PML9 568 aa3.48□□□□□ -1.85
SNHG1-202ENST00000535689 ZNF793Q6ZN11 406 aa3.48□□□□□ -1.85
SNHG1-202ENST00000535689 NEK10Q6ZWH5 1172 aa3.48□□□□□ -1.85
SNHG1-202ENST00000535689 PALB2Q86YC2 1186 aa3.48□□□□□ -1.85
SNHG1-202ENST00000535689 TMEM199Q8N511 208 aa3.48□□□□□ -1.85
SNHG1-202ENST00000535689 PCYOX1LQ8NBM8 494 aa3.48□□□□□ -1.85
SNHG1-202ENST00000535689 NFKBIDQ8NI38 313 aa3.48□□□□□ -1.85
SNHG1-202ENST00000535689 CLEC4CQ8WTT0 213 aa3.48□□□□□ -1.85
SNHG1-202ENST00000535689 HDAC7Q8WUI4 952 aa3.48□□□□□ -1.85
SNHG1-202ENST00000535689 FAR1Q8WVX9 515 aa3.48□□□□□ -1.85
SNHG1-202ENST00000535689 RFFLQ8WZ73 363 aa3.48□□□□□ -1.85
SNHG1-202ENST00000535689 APOPT1Q96IL0 206 aa3.48□□□□□ -1.85
SNHG1-202ENST00000535689 SIGLEC11Q96RL6 698 aa3.48□□□□□ -1.85
SNHG1-202ENST00000535689 ZNF347Q96SE7 839 aa3.48□□□□□ -1.85
SNHG1-202ENST00000535689 WDR83Q9BRX9 315 aaKnown RBP3.48□□□□□ -1.85
SNHG1-202ENST00000535689 FUZQ9BT04 418 aa3.48□□□□□ -1.85
SNHG1-202ENST00000535689 MMTAG2Q9BU76 263 aaKnown RBP3.48□□□□□ -1.85
SNHG1-202ENST00000535689 UPF3BQ9BZI7 483 aaKnown RBP3.48□□□□□ -1.85
SNHG1-202ENST00000535689 PRSS22Q9GZN4 317 aa3.48□□□□□ -1.85
SNHG1-202ENST00000535689 STN1Q9H668 368 aaKnown RBP3.48□□□□□ -1.85
SNHG1-202ENST00000535689 PRKRIP1Q9H875 184 aaPredicted RBP3.48□□□□□ -1.85
SNHG1-202ENST00000535689 MOV10Q9HCE1 1003 aaKnown RBP3.48□□□□□ -1.85
SNHG1-202ENST00000535689 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.48□□□□□ -1.85
SNHG1-202ENST00000535689 TAS2R10Q9NYW0 307 aa3.48□□□□□ -1.85
SNHG1-202ENST00000535689 GRHL1Q9NZI5 618 aa3.48□□□□□ -1.85
SNHG1-202ENST00000535689 MPP6Q9NZW5 540 aa3.48□□□□□ -1.85
SNHG1-202ENST00000535689 LAMP3Q9UQV4 416 aa3.48□□□□□ -1.85
SNHG1-202ENST00000535689 CLDN16Q9Y5I7 305 aa3.48□□□□□ -1.85
SNHG1-202ENST00000535689 ZMYM2Q9UBW7 1377 aa3.48□□□□□ -1.85
SNHG1-202ENST00000535689 FNDC1Q4ZHG4 1894 aaPredicted RBP3.47□□□□□ -1.85
SNHG1-202ENST00000535689 UTYO14607 1347 aa3.47□□□□□ -1.85
SNHG1-202ENST00000535689 MROH5Q6ZUA9 1318 aa3.47□□□□□ -1.85
SNHG1-202ENST00000535689 FRMPD3Q5JV73 1810 aa3.47□□□□□ -1.85
SNHG1-202ENST00000535689 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.47□□□□□ -1.85
SNHG1-202ENST00000535689 PI4KAP2A4QPH2 592 aa3.47□□□□□ -1.85
SNHG1-202ENST00000535689 SLC15A5A6NIM6 579 aa3.47□□□□□ -1.85
SNHG1-202ENST00000535689 A6NLC8 198 aa3.47□□□□□ -1.85
SNHG1-202ENST00000535689 C2CD4BA6NLJ0 364 aa3.47□□□□□ -1.85
SNHG1-202ENST00000535689 FOXO6A8MYZ6 492 aa3.47□□□□□ -1.85
SNHG1-202ENST00000535689 F5H0A9 414 aaPredicted RBP3.47□□□□□ -1.85
SNHG1-202ENST00000535689 BCAR3O75815 825 aa3.47□□□□□ -1.85
SNHG1-202ENST00000535689 C1QL1O75973 258 aa3.47□□□□□ -1.85
SNHG1-202ENST00000535689 CBX6O95503 412 aa3.47□□□□□ -1.85
SNHG1-202ENST00000535689 SERPINC1P01008 464 aa3.47□□□□□ -1.85
SNHG1-202ENST00000535689 WNT1P04628 370 aa3.47□□□□□ -1.85
SNHG1-202ENST00000535689 LDHCP07864 332 aa3.47□□□□□ -1.85
SNHG1-202ENST00000535689 HSP90AA1P07900 732 aaKnown RBP3.47□□□□□ -1.85
SNHG1-202ENST00000535689 CLTBP09497 229 aa3.47□□□□□ -1.85
SNHG1-202ENST00000535689 CSF1P09603 554 aa3.47□□□□□ -1.85
SNHG1-202ENST00000535689 PTPN2P17706 415 aa3.47□□□□□ -1.85
SNHG1-202ENST00000535689 ATP5F1P24539 256 aaPredicted RBP3.47□□□□□ -1.85
SNHG1-202ENST00000535689 KLRC2P26717 231 aa3.47□□□□□ -1.85
SNHG1-202ENST00000535689 POU1F1P28069 291 aa3.47□□□□□ -1.85
SNHG1-202ENST00000535689 RFC1P35251 1148 aaPredicted RBP3.47□□□□□ -1.85
SNHG1-202ENST00000535689 RHAGQ02094 409 aa3.47□□□□□ -1.85
SNHG1-202ENST00000535689 COL10A1Q03692 680 aa3.47□□□□□ -1.85
SNHG1-202ENST00000535689 G3BP1Q13283 466 aaKnown RBP eCLIP3.47□□□□□ -1.85
SNHG1-202ENST00000535689 DAZAP2Q15038 168 aaPredicted RBP3.47□□□□□ -1.85
SNHG1-202ENST00000535689 RALBP1Q15311 655 aa3.47□□□□□ -1.85
SNHG1-202ENST00000535689 HIST2H2ACQ16777 129 aaPredicted RBP3.47□□□□□ -1.85
SNHG1-202ENST00000535689 MANEAQ5SRI9 462 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms