RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 WEE2P0C1S8 567 aa6.67□□□□□ -1.34
USP28-202ENST00000535607 POLR2MP0CAP2 368 aa6.67□□□□□ -1.34
USP28-202ENST00000535607 CD58P19256 250 aa6.67□□□□□ -1.34
USP28-202ENST00000535607 PI3P19957 117 aa6.67□□□□□ -1.34
USP28-202ENST00000535607 CRHR1P34998 444 aa6.67□□□□□ -1.34
USP28-202ENST00000535607 RAP1GAPP47736 663 aa6.67□□□□□ -1.34
USP28-202ENST00000535607 CPA2P48052 419 aa6.67□□□□□ -1.34
USP28-202ENST00000535607 TMED10P49755 219 aaKnown RBP6.67□□□□□ -1.34
USP28-202ENST00000535607 NEK2P51955 445 aa6.67□□□□□ -1.34
USP28-202ENST00000535607 EPHB1P54762 984 aa6.67□□□□□ -1.34
USP28-202ENST00000535607 HMGCS2P54868 508 aa6.67□□□□□ -1.34
USP28-202ENST00000535607 INHBCP55103 352 aa6.67□□□□□ -1.34
USP28-202ENST00000535607 HUNKP57058 714 aa6.67□□□□□ -1.34
USP28-202ENST00000535607 YWHAGP61981 247 aaKnown RBP eCLIP6.67□□□□□ -1.34
USP28-202ENST00000535607 CREB5Q02930 508 aa6.67□□□□□ -1.34
USP28-202ENST00000535607 BTKQ06187 659 aa6.67□□□□□ -1.34
USP28-202ENST00000535607 PPP3CAQ08209 521 aa6.67□□□□□ -1.34
USP28-202ENST00000535607 BST1Q10588 318 aa6.67□□□□□ -1.34
USP28-202ENST00000535607 TBL3Q12788 808 aaKnown RBP6.67□□□□□ -1.34
USP28-202ENST00000535607 DLG1Q12959 904 aa6.67□□□□□ -1.34
USP28-202ENST00000535607 NAB1Q13506 487 aa6.67□□□□□ -1.34
USP28-202ENST00000535607 PRKG1Q13976 671 aa6.67□□□□□ -1.34
USP28-202ENST00000535607 ACAP2Q15057 778 aa6.67□□□□□ -1.34
USP28-202ENST00000535607 SNRNP35Q16560 246 aaKnown RBP6.67□□□□□ -1.34
USP28-202ENST00000535607 SFT2D3Q587I9 215 aa6.67□□□□□ -1.34
USP28-202ENST00000535607 CST9Q5W186 159 aa6.67□□□□□ -1.34
USP28-202ENST00000535607 KAZNQ674X7 775 aa6.67□□□□□ -1.34
USP28-202ENST00000535607 KRT80Q6KB66 452 aa6.67□□□□□ -1.34
USP28-202ENST00000535607 DCUN1D2Q6PH85 259 aa6.67□□□□□ -1.34
USP28-202ENST00000535607 USP17L6PQ6QN14 398 aa6.67□□□□□ -1.34
USP28-202ENST00000535607 Q6ZNX1 250 aa6.67□□□□□ -1.34
USP28-202ENST00000535607 RFX8Q6ZV50 586 aa6.67□□□□□ -1.34
USP28-202ENST00000535607 GPR141Q7Z602 305 aa6.67□□□□□ -1.34
USP28-202ENST00000535607 KBTBD6Q86V97 674 aa6.67□□□□□ -1.34
USP28-202ENST00000535607 ZNF410Q86VK4 478 aa6.67□□□□□ -1.34
USP28-202ENST00000535607 PROSER1Q86XN7 944 aa6.67□□□□□ -1.34
USP28-202ENST00000535607 TMEM151BQ8IW70 566 aa6.67□□□□□ -1.34
USP28-202ENST00000535607 ZNF276Q8N554 614 aa6.67□□□□□ -1.34
USP28-202ENST00000535607 SAMD3Q8N6K7 520 aa6.67□□□□□ -1.34
USP28-202ENST00000535607 SCAIQ8N9R8 606 aa6.67□□□□□ -1.34
USP28-202ENST00000535607 MINDY2Q8NBR6 621 aa6.67□□□□□ -1.34
USP28-202ENST00000535607 ZFP28Q8NHY6 868 aa6.67□□□□□ -1.34
USP28-202ENST00000535607 ZNF420Q8TAQ5 688 aaPredicted RBP6.67□□□□□ -1.34
USP28-202ENST00000535607 PYDC1Q8WXC3 89 aa6.67□□□□□ -1.34
USP28-202ENST00000535607 CDKL2Q92772 493 aa6.67□□□□□ -1.34
USP28-202ENST00000535607 FOXRED1Q96CU9 486 aaPredicted RBP6.67□□□□□ -1.34
USP28-202ENST00000535607 ABHD8Q96I13 439 aa6.67□□□□□ -1.34
USP28-202ENST00000535607 RAX2Q96IS3 184 aa6.67□□□□□ -1.34
USP28-202ENST00000535607 HIST1H2AHQ96KK5 128 aa6.67□□□□□ -1.34
USP28-202ENST00000535607 GCNAQ96QF7 691 aa6.67□□□□□ -1.34
USP28-202ENST00000535607 RIT2Q99578 217 aa6.67□□□□□ -1.34
USP28-202ENST00000535607 HNRNPABQ99729 332 aaKnown RBP6.67□□□□□ -1.34
USP28-202ENST00000535607 OLFM1Q99784 485 aa6.67□□□□□ -1.34
USP28-202ENST00000535607 HIST1H2AJQ99878 128 aa6.67□□□□□ -1.34
USP28-202ENST00000535607 STRA6Q9BX79 667 aa6.67□□□□□ -1.34
USP28-202ENST00000535607 OSBPL11Q9BXB4 747 aa6.67□□□□□ -1.34
USP28-202ENST00000535607 KLC2Q9H0B6 622 aa6.67□□□□□ -1.34
USP28-202ENST00000535607 MS4A5Q9H3V2 200 aa6.67□□□□□ -1.34
USP28-202ENST00000535607 XAB2Q9HCS7 855 aaKnown RBP6.67□□□□□ -1.34
USP28-202ENST00000535607 GCM1Q9NP62 436 aa6.67□□□□□ -1.34
USP28-202ENST00000535607 PNPLA3Q9NST1 481 aa6.67□□□□□ -1.34
USP28-202ENST00000535607 DDX18Q9NVP1 670 aaKnown RBP6.67□□□□□ -1.34
USP28-202ENST00000535607 GID8Q9NWU2 228 aa6.67□□□□□ -1.34
USP28-202ENST00000535607 NTMQ9P121 344 aa6.67□□□□□ -1.34
USP28-202ENST00000535607 IGSF9Q9P2J2 1179 aa6.67□□□□□ -1.34
USP28-202ENST00000535607 HSFX1Q9UBD0 423 aa6.67□□□□□ -1.34
USP28-202ENST00000535607 DCDC2Q9UHG0 476 aa6.67□□□□□ -1.34
USP28-202ENST00000535607 MID2Q9UJV3 735 aa6.67□□□□□ -1.34
USP28-202ENST00000535607 DNPEPQ9ULA0 475 aa6.67□□□□□ -1.34
USP28-202ENST00000535607 SLC8A2Q9UPR5 921 aa6.67□□□□□ -1.34
USP28-202ENST00000535607 POMPQ9Y244 141 aa6.67□□□□□ -1.34
USP28-202ENST00000535607 MYRFQ9Y2G1 1151 aa6.67□□□□□ -1.34
USP28-202ENST00000535607 KCTD3Q9Y597 815 aa6.67□□□□□ -1.34
USP28-202ENST00000535607 SF3B1O75533 1304 aaKnown RBP eCLIP6.67□□□□□ -1.348e-6■■■■■ 107
USP28-202ENST00000535607 RLFQ13129 1914 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 A0A087WXM4 84 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 KANSL1LA0AUZ9 987 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 DENND3A2RUS2 1198 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 TMEM247A6NEH6 219 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 MANSC4A6NHS7 340 aaPredicted RBP6.66□□□□□ -1.34
USP28-202ENST00000535607 PRR5-ARHGAP8B1AHC4 643 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 TRIM49D1C9J1S8 452 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 GOLGA8TH3BQL2 631 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 GOLGA8RI6L899 631 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 K7ESF4 209 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 MEIS2O14770 477 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 ITM2AO43736 263 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 NRP2O60462 931 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 GLRA3O75311 464 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 SNNO75324 88 aaPredicted RBP6.66□□□□□ -1.34
USP28-202ENST00000535607 USP1O94782 785 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 SLITRK3O94933 977 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 BMP10O95393 424 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 H6PDO95479 791 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 SERPINE1P05121 402 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 ICAM1P05362 532 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 TFAP2AP05549 437 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 CD48P09326 243 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 CLEC2LP0C7M8 214 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 OCM2P0CE71 109 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms