RNA–Protein interactions for RNA: ENST00000535477.5

CLPB-205, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-205ENST00000535477 TRIM24O15164 1050 aa18.84■□□□□ 0.61
CLPB-205ENST00000535477 ALPIP09923 528 aa18.84■□□□□ 0.61
CLPB-205ENST00000535477 CPA3P15088 417 aa18.84■□□□□ 0.61
CLPB-205ENST00000535477 LPOP22079 712 aaPredicted RBP18.84■□□□□ 0.61
CLPB-205ENST00000535477 CSRP3P50461 194 aa18.84■□□□□ 0.61
CLPB-205ENST00000535477 MRNIPQ6NTE8 343 aa18.84■□□□□ 0.61
CLPB-205ENST00000535477 TRPM8Q7Z2W7 1104 aa18.84■□□□□ 0.61
CLPB-205ENST00000535477 MYO19Q96H55 970 aa18.84■□□□□ 0.61
CLPB-205ENST00000535477 OLFM1Q99784 485 aa18.84■□□□□ 0.61
CLPB-205ENST00000535477 ANKRD6Q9Y2G4 727 aa18.84■□□□□ 0.61
CLPB-205ENST00000535477 ANKRD36A6QL64 1941 aa18.84■□□□□ 0.61
CLPB-205ENST00000535477 RFXAPO00287 272 aa18.83■□□□□ 0.61
CLPB-205ENST00000535477 FZD6O60353 706 aa18.83■□□□□ 0.61
CLPB-205ENST00000535477 PGLSO95336 258 aa18.83■□□□□ 0.61
CLPB-205ENST00000535477 IGSF6O95976 241 aa18.83■□□□□ 0.61
CLPB-205ENST00000535477 TROVE2P10155 538 aaKnown RBP eCLIP18.83■□□□□ 0.61
CLPB-205ENST00000535477 PABPC1P11940 636 aaKnown RBP18.83■□□□□ 0.61
CLPB-205ENST00000535477 VIPR2P41587 438 aa18.83■□□□□ 0.61
CLPB-205ENST00000535477 POLD2P49005 469 aa18.83■□□□□ 0.61
CLPB-205ENST00000535477 POU4F1Q01851 419 aa18.83■□□□□ 0.61
CLPB-205ENST00000535477 SLC20A2Q08357 652 aa18.83■□□□□ 0.61
CLPB-205ENST00000535477 STX3Q13277 289 aa18.83■□□□□ 0.61
CLPB-205ENST00000535477 DUSP6Q16828 381 aa18.83■□□□□ 0.61
CLPB-205ENST00000535477 RALGPS1Q5JS13 557 aa18.83■□□□□ 0.61
CLPB-205ENST00000535477 RFWD2Q8NHY2 731 aa18.83■□□□□ 0.61
CLPB-205ENST00000535477 CCT6BQ92526 530 aa18.83■□□□□ 0.61
CLPB-205ENST00000535477 SCYL1Q96KG9 808 aa18.83■□□□□ 0.61
CLPB-205ENST00000535477 C1QTNF1Q9BXJ1 281 aa18.83■□□□□ 0.61
CLPB-205ENST00000535477 C20orf27Q9GZN8 174 aa18.83■□□□□ 0.61
CLPB-205ENST00000535477 POLR3BQ9NW08 1133 aaPredicted RBP18.83■□□□□ 0.61
CLPB-205ENST00000535477 CDH22Q9UJ99 828 aa18.83■□□□□ 0.61
CLPB-205ENST00000535477 EPOPA6NHQ4 379 aa18.83■□□□□ 0.6
CLPB-205ENST00000535477 CRABP2P29373 138 aa18.83■□□□□ 0.6
CLPB-205ENST00000535477 PMLP29590 882 aa18.83■□□□□ 0.6
CLPB-205ENST00000535477 MBLAC2Q68D91 279 aa18.83■□□□□ 0.6
CLPB-205ENST00000535477 TRIM68Q6AZZ1 485 aa18.83■□□□□ 0.6
CLPB-205ENST00000535477 YTHDF3Q7Z739 585 aaKnown RBP18.83■□□□□ 0.6
CLPB-205ENST00000535477 LMNTD2Q8IXW0 634 aa18.83■□□□□ 0.6
CLPB-205ENST00000535477 CELF5Q8N6W0 485 aaKnown RBP18.83■□□□□ 0.6
CLPB-205ENST00000535477 OR2AP1Q8NGE2 309 aa18.83■□□□□ 0.6
CLPB-205ENST00000535477 SLCO3A1Q9UIG8 710 aa18.83■□□□□ 0.6
CLPB-205ENST00000535477 SLC25A13Q9UJS0 675 aa18.83■□□□□ 0.6
CLPB-205ENST00000535477 RIMKLBQ9ULI2 386 aa18.83■□□□□ 0.6
CLPB-205ENST00000535477 STX7O15400 261 aaKnown RBP18.82■□□□□ 0.6
CLPB-205ENST00000535477 FGF3P11487 239 aaPredicted RBP18.82■□□□□ 0.6
CLPB-205ENST00000535477 CLCN5P51795 746 aa18.82■□□□□ 0.6
CLPB-205ENST00000535477 HECTD2Q5U5R9 776 aa18.82■□□□□ 0.6
CLPB-205ENST00000535477 SDCCAG8Q86SQ7 713 aaPredicted RBP18.82■□□□□ 0.6
CLPB-205ENST00000535477 METTL3Q86U44 580 aaKnown RBP18.82■□□□□ 0.6
CLPB-205ENST00000535477 CENPLQ8N0S6 344 aaPredicted RBP18.82■□□□□ 0.6
CLPB-205ENST00000535477 PIH1D2Q8WWB5 315 aa18.82■□□□□ 0.6
CLPB-205ENST00000535477 NXNL1Q96CM4 212 aa18.82■□□□□ 0.6
CLPB-205ENST00000535477 RSPRY1Q96DX4 576 aa18.82■□□□□ 0.6
CLPB-205ENST00000535477 TRIM55Q9BYV6 548 aa18.82■□□□□ 0.6
CLPB-205ENST00000535477 HECAQ9UBI9 543 aaPredicted RBP18.82■□□□□ 0.6
CLPB-205ENST00000535477 FKBPLQ9UIM3 349 aa18.82■□□□□ 0.6
CLPB-205ENST00000535477 ZMYM5Q9UJ78 669 aa18.82■□□□□ 0.6
CLPB-205ENST00000535477 A0A0G2JND7 137 aa18.81■□□□□ 0.6
CLPB-205ENST00000535477 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.81■□□□□ 0.6
CLPB-205ENST00000535477 TK2O00142 265 aa18.81■□□□□ 0.6
CLPB-205ENST00000535477 POU2F2P09086 479 aa18.81■□□□□ 0.6
CLPB-205ENST00000535477 GRIA4P48058 902 aa18.81■□□□□ 0.6
CLPB-205ENST00000535477 SPRED3Q2MJR0 410 aa18.81■□□□□ 0.6
CLPB-205ENST00000535477 RARS2Q5T160 578 aaKnown RBP18.81■□□□□ 0.6
CLPB-205ENST00000535477 GPR150Q8NGU9 434 aa18.81■□□□□ 0.6
CLPB-205ENST00000535477 C10orf82Q8WW14 230 aa18.81■□□□□ 0.6
CLPB-205ENST00000535477 GPR63Q9BZJ6 419 aa18.81■□□□□ 0.6
CLPB-205ENST00000535477 FAM96AQ9H5X1 160 aa18.81■□□□□ 0.6
CLPB-205ENST00000535477 ATP13A3Q9H7F0 1226 aa18.81■□□□□ 0.6
CLPB-205ENST00000535477 SLC28A3Q9HAS3 691 aa18.81■□□□□ 0.6
CLPB-205ENST00000535477 DUS2Q9NX74 493 aaKnown RBP18.81■□□□□ 0.6
CLPB-205ENST00000535477 MSRAQ9UJ68 235 aa18.81■□□□□ 0.6
CLPB-205ENST00000535477 HS3ST2Q9Y278 367 aa18.81■□□□□ 0.6
CLPB-205ENST00000535477 VWA7Q9Y334 891 aa18.81■□□□□ 0.6
CLPB-205ENST00000535477 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.81■□□□□ 0.6
CLPB-205ENST00000535477 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.81■□□□□ 0.6
CLPB-205ENST00000535477 A8MX80 341 aa18.81■□□□□ 0.6
CLPB-205ENST00000535477 G3V2L1 256 aa18.81■□□□□ 0.6
CLPB-205ENST00000535477 TRAFD1O14545 582 aaPredicted RBP18.81■□□□□ 0.6
CLPB-205ENST00000535477 KITP10721 976 aa18.81■□□□□ 0.6
CLPB-205ENST00000535477 CDKN1CP49918 316 aaPredicted RBP18.81■□□□□ 0.6
CLPB-205ENST00000535477 CDKN2DP55273 166 aa18.81■□□□□ 0.6
CLPB-205ENST00000535477 SNRPD1P62314 119 aaKnown RBP18.81■□□□□ 0.6
CLPB-205ENST00000535477 ECT2LQ008S8 904 aa18.81■□□□□ 0.6
CLPB-205ENST00000535477 DLG1Q12959 904 aa18.81■□□□□ 0.6
CLPB-205ENST00000535477 ITGA9Q13797 1035 aa18.81■□□□□ 0.6
CLPB-205ENST00000535477 C22orf39Q6P5X5 142 aa18.81■□□□□ 0.6
CLPB-205ENST00000535477 LYSMD3Q7Z3D4 306 aa18.81■□□□□ 0.6
CLPB-205ENST00000535477 GALNT7Q86SF2 657 aa18.81■□□□□ 0.6
CLPB-205ENST00000535477 RAB3IL1Q8TBN0 382 aa18.81■□□□□ 0.6
CLPB-205ENST00000535477 SFXN1Q9H9B4 322 aa18.81■□□□□ 0.6
CLPB-205ENST00000535477 ZNF711Q9Y462 761 aa18.81■□□□□ 0.6
CLPB-205ENST00000535477 UBA6A0AVT1 1052 aaPredicted RBP18.8■□□□□ 0.6
CLPB-205ENST00000535477 SLC9A3R1O14745 358 aaPredicted RBP18.8■□□□□ 0.6
CLPB-205ENST00000535477 ITM2AO43736 263 aa18.8■□□□□ 0.6
CLPB-205ENST00000535477 LYPLA1O75608 230 aaPredicted RBP18.8■□□□□ 0.6
CLPB-205ENST00000535477 RALBP11234 206 aa18.8■□□□□ 0.6
CLPB-205ENST00000535477 MAPK8P45983 427 aa18.8■□□□□ 0.6
CLPB-205ENST00000535477 CSNK1DP48730 415 aa18.8■□□□□ 0.6
CLPB-205ENST00000535477 CSHL1Q14406 222 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms