RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 NSUN7Q8NE18 718 aaKnown RBP3.09□□□□□ -1.91
CHMP4A-208ENST00000534106 OR5B17Q8NGF7 314 aa3.09□□□□□ -1.91
CHMP4A-208ENST00000534106 ERMNQ8TAM6 284 aa3.09□□□□□ -1.91
CHMP4A-208ENST00000534106 MYCBPAPQ8TBZ2 947 aa3.09□□□□□ -1.91
CHMP4A-208ENST00000534106 ZNF564Q8TBZ8 553 aaPredicted RBP3.09□□□□□ -1.91
CHMP4A-208ENST00000534106 MAPK15Q8TD08 544 aa3.09□□□□□ -1.91
CHMP4A-208ENST00000534106 NOC3LQ8WTT2 800 aaKnown RBP3.09□□□□□ -1.91
CHMP4A-208ENST00000534106 THAP3Q8WTV1 239 aaPredicted RBP3.09□□□□□ -1.91
CHMP4A-208ENST00000534106 KLK6Q92876 244 aa3.09□□□□□ -1.91
CHMP4A-208ENST00000534106 OTUB2Q96DC9 234 aa3.09□□□□□ -1.91
CHMP4A-208ENST00000534106 SAAL1Q96ER3 474 aa3.09□□□□□ -1.91
CHMP4A-208ENST00000534106 FUBP3Q96I24 572 aaKnown RBP eCLIP3.09□□□□□ -1.91
CHMP4A-208ENST00000534106 SERAC1Q96JX3 654 aa3.09□□□□□ -1.91
CHMP4A-208ENST00000534106 C8orf48Q96LL4 319 aa3.09□□□□□ -1.91
CHMP4A-208ENST00000534106 APOLD1Q96LR9 279 aa3.09□□□□□ -1.91
CHMP4A-208ENST00000534106 DNAJC7Q99615 494 aa3.09□□□□□ -1.91
CHMP4A-208ENST00000534106 SEMA3CQ99985 751 aa3.09□□□□□ -1.91
CHMP4A-208ENST00000534106 FAM213AQ9BRX8 229 aa3.09□□□□□ -1.91
CHMP4A-208ENST00000534106 FUCA2Q9BTY2 467 aa3.09□□□□□ -1.91
CHMP4A-208ENST00000534106 MMTAG2Q9BU76 263 aaKnown RBP3.09□□□□□ -1.91
CHMP4A-208ENST00000534106 CCSER1Q9C0I3 900 aa3.09□□□□□ -1.91
CHMP4A-208ENST00000534106 NACA2Q9H009 215 aa3.09□□□□□ -1.91
CHMP4A-208ENST00000534106 ABCG4Q9H172 646 aa3.09□□□□□ -1.91
CHMP4A-208ENST00000534106 ASB7Q9H672 318 aa3.09□□□□□ -1.91
CHMP4A-208ENST00000534106 PDE11AQ9HCR9 933 aa3.09□□□□□ -1.91
CHMP4A-208ENST00000534106 GEMIN8Q9NWZ8 242 aaKnown RBP3.09□□□□□ -1.91
CHMP4A-208ENST00000534106 FBXL12Q9NXK8 326 aa3.09□□□□□ -1.91
CHMP4A-208ENST00000534106 ORC3Q9UBD5 711 aaPredicted RBP3.09□□□□□ -1.91
CHMP4A-208ENST00000534106 AGO2Q9UKV8 859 aaKnown RBP3.09□□□□□ -1.91
CHMP4A-208ENST00000534106 ENTPD2Q9Y5L3 495 aa3.09□□□□□ -1.91
CHMP4A-208ENST00000534106 TNFRSF18Q9Y5U5 241 aa3.09□□□□□ -1.91
CHMP4A-208ENST00000534106 MAP1AP78559 2803 aaPredicted RBP3.09□□□□□ -1.92
CHMP4A-208ENST00000534106 TRIP11Q15643 1979 aa3.09□□□□□ -1.92
CHMP4A-208ENST00000534106 SPG11Q96JI7 2443 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 TBC1D3DA0A087WVF3 549 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 TBC1D3IA0A087WXS9 549 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 TBC1D3EA0A087X179 549 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 TBC1D3KA0A087X1G2 549 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 KRTAP23-1A1A580 65 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 TBC1D3FA6NER0 549 aaPredicted RBP3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 TTC34A8MYJ7 566 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 TBC1D3LB9A6J9 549 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 SCDO00767 359 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 TLR5O60602 858 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 RNASEH2AO75792 299 aaKnown RBP3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 NUDT3O95989 172 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 PENKP01210 267 aaPredicted RBP3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 DNTTP04053 509 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 KRT7P08729 469 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 ZDHHC11BP0C7U3 371 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 TBC1D3HP0C7X1 549 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 PLA2G4BP0C869 781 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 CKMT1AP12532 417 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 NAT1P18440 290 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 NR1D1P20393 614 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 PAX3P23760 479 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 AOAHP28039 575 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 PCSK1P29120 753 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 PTGS2P35354 604 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 CASRP41180 1078 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 PPP3CCP48454 512 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 LHX1P48742 406 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 ARRB1P49407 418 aaPredicted RBP3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 PDE6CP51160 858 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 PDX1P52945 283 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 SLC12A3P55017 1021 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 JAM2P57087 298 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 CLDN2P57739 230 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 NOP14P78316 857 aaKnown RBP3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 RBP5P82980 135 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 GUCY1A3Q02108 690 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 STILQ15468 1287 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 FIGNQ5HY92 759 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 YOD1Q5VVQ6 348 aaPredicted RBP3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 C1QL3Q5VWW1 255 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 TMEM200BQ69YZ2 307 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 TBC1D3GQ6DHY5 549 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 TBC1D3CQ6IPX1 549 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 GUSBP11Q6P575 273 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 VSTM1Q6UX27 236 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 C4orf50Q6ZRC1 276 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 RUFY3Q7L099 469 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 GPRIN1Q7Z2K8 1008 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 EFL1Q7Z2Z2 1120 aaKnown RBP3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 SCD5Q86SK9 330 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 ADIPOR2Q86V24 386 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 DENND1CQ8IV53 801 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 MMAAQ8IVH4 418 aaKnown RBP3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 ZC3H7AQ8IWR0 971 aaKnown RBP3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 TBC1D3Q8IZP1 549 aaPredicted RBP3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 TMEM86AQ8N2M4 240 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 FBXL16Q8N461 479 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 AADATQ8N5Z0 425 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 KIAA1958Q8N8K9 716 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 ZMIZ2Q8NF64 920 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 OR6B3Q8NGW1 331 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 OR14C36Q8NHC7 312 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 IFI44Q8TCB0 444 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 WFDC5Q8TCV5 224 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms