RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 ILVBLA1L0T0 632 aa11.3□□□□□ -0.6
AMBRA1-211ENST00000533727 SNTNA6NMZ2 147 aa11.3□□□□□ -0.6
AMBRA1-211ENST00000533727 MAP2K7O14733 419 aa11.3□□□□□ -0.6
AMBRA1-211ENST00000533727 CTPS1P17812 591 aa11.3□□□□□ -0.6
AMBRA1-211ENST00000533727 ATP6V1C1P21283 382 aa11.3□□□□□ -0.6
AMBRA1-211ENST00000533727 MC4RP32245 332 aa11.3□□□□□ -0.6
AMBRA1-211ENST00000533727 RPL22P35268 128 aaKnown RBP11.3□□□□□ -0.6
AMBRA1-211ENST00000533727 WASP42768 502 aa11.3□□□□□ -0.6
AMBRA1-211ENST00000533727 POLD2P49005 469 aa11.3□□□□□ -0.6
AMBRA1-211ENST00000533727 TBL3Q12788 808 aaKnown RBP11.3□□□□□ -0.6
AMBRA1-211ENST00000533727 ZNF776Q68DI1 518 aaPredicted RBP11.3□□□□□ -0.6
AMBRA1-211ENST00000533727 FLCNQ8NFG4 579 aa11.3□□□□□ -0.6
AMBRA1-211ENST00000533727 CHST7Q9NS84 486 aa11.3□□□□□ -0.6
AMBRA1-211ENST00000533727 GULP1Q9UBP9 304 aa11.3□□□□□ -0.6
AMBRA1-211ENST00000533727 TMCC3Q9ULS5 477 aa11.3□□□□□ -0.6
AMBRA1-211ENST00000533727 PRMT5O14744 637 aaPredicted RBP11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 TPST1O60507 370 aa11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 USP12O75317 370 aa11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 ANXA6P08133 673 aa11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 TPSB2P20231 275 aa11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 ALDH9A1P49189 494 aa11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 ELF3P78545 371 aaPredicted RBP11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 TPSAB1Q15661 275 aa11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 RFWD3Q6PCD5 774 aa11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 CCDC81Q6ZN84 652 aa11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 C10orf53Q8N6V4 93 aa11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 LRRN4CLQ8ND94 238 aa11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 MRPL48Q96GC5 212 aaKnown RBP11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 STYXL1Q9Y6J8 313 aa11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 SESN1Q9Y6P5 492 aa11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 GSAPA4D1B5 854 aa11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 INSIG1O15503 277 aa11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 CDK14O94921 469 aa11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 STBD1O95210 358 aa11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 COX7A2P14406 83 aa11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 FOSL2P15408 326 aa11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 PCSK2P16519 638 aa11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 ADSSP30520 456 aa11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 BLVRAP53004 296 aa11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 CACNG1Q06432 222 aa11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 KCTD21Q4G0X4 260 aa11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 CARD16Q5EG05 197 aa11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 N4BP2L1Q5TBK1 243 aaPredicted RBP11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 NPNTQ6UXI9 565 aa11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 CLEC20AQ6ZU45 233 aa11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 CLYBLQ8N0X4 340 aa11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 PCDH20Q8N6Y1 951 aaKnown RBP11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 ZNF614Q8N883 585 aa11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 KLHL23Q8NBE8 558 aa11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 SIPA1Q96FS4 1042 aa11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 OSBPL2Q9H1P3 480 aa11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 WDR6Q9NNW5 1121 aaKnown RBP11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 TAGLN3Q9UI15 199 aa11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 DAPK2Q9UIK4 370 aa11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 DNAJC16Q9Y2G8 782 aa11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 BCLAF3A2AJT9 711 aaKnown RBP11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 MTMR11A4FU01 709 aa11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 RHPN2P1A8MT19 583 aa11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 CD3EAPO15446 510 aaKnown RBP11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 PFKLP17858 780 aa11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 PSMA4P25789 261 aaKnown RBP11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 RPL21P46778 160 aaKnown RBP11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 GHRHRQ02643 423 aa11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 PRMT9Q6P2P2 845 aa11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 SRFBP1Q8NEF9 429 aaKnown RBP11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 USP7Q93009 1102 aa11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 QKIQ96PU8 341 aaKnown RBP eCLIP11.29□□□□□ -0.63e-8■■■■□ 20.8
AMBRA1-211ENST00000533727 HGH1Q9BTY7 390 aa11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 MINDY3Q9H8M7 445 aa11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 ZNF446Q9NWS9 450 aa11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 TRPC4Q9UBN4 977 aa11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 UBR2Q8IWV8 1755 aa11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 C15orf38-AP3S2A0A0A6YYH1 394 aa11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 SAC3D1A6NKF1 404 aa11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 RIPK2O43353 540 aa11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 CNMDO75829 334 aa11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 LRIG2O94898 1065 aa11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 ABHD2P08910 425 aa11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 LMO2P25791 158 aa11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 DRG2P55039 364 aaKnown RBP11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 ECT2LQ008S8 904 aa11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 PGS1Q32NB8 556 aa11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 LRRC74BQ6ZQY2 392 aa11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 ARPINQ7Z6K5 226 aa11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 TAF8Q7Z7C8 310 aa11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 SLC51AQ86UW1 340 aa11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 LGMNQ99538 433 aa11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 EBNA1BP2Q99848 306 aaKnown RBP11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 EPS8L2Q9H6S3 715 aa11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 ELOVL2Q9NXB9 296 aa11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 CACNA2D2Q9NY47 1150 aa11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 FBXO5Q9UKT4 447 aa11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 SNX13Q9Y5W8 968 aa11.29□□□□□ -0.6
AMBRA1-211ENST00000533727 C2CD4BA6NLJ0 364 aa11.28□□□□□ -0.6
AMBRA1-211ENST00000533727 UBDO15205 165 aa11.28□□□□□ -0.6
AMBRA1-211ENST00000533727 TNFAIP8O95379 198 aa11.28□□□□□ -0.6
AMBRA1-211ENST00000533727 RRM2P31350 389 aa11.28□□□□□ -0.6
AMBRA1-211ENST00000533727 SEC13P55735 322 aa11.28□□□□□ -0.6
AMBRA1-211ENST00000533727 MAXP61244 160 aa11.28□□□□□ -0.6
AMBRA1-211ENST00000533727 RASA2Q15283 850 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms