RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 IGLV2-14P01704 120 aa3.06□□□□□ -1.92
CD44-234ENST00000531873 SAT1P21673 171 aa3.06□□□□□ -1.92
CD44-234ENST00000531873 PIK3CAP42336 1068 aa3.06□□□□□ -1.92
CD44-234ENST00000531873 PPP3CCP48454 512 aa3.06□□□□□ -1.92
CD44-234ENST00000531873 COMPP49747 757 aaPredicted RBP3.06□□□□□ -1.92
CD44-234ENST00000531873 RAD23AP54725 363 aa3.06□□□□□ -1.92
CD44-234ENST00000531873 RRP1P56182 461 aaKnown RBP3.06□□□□□ -1.92
CD44-234ENST00000531873 ACSM2AQ08AH3 577 aa3.06□□□□□ -1.92
CD44-234ENST00000531873 AIMP1Q12904 312 aaKnown RBP3.06□□□□□ -1.92
CD44-234ENST00000531873 STIM1Q13586 685 aa3.06□□□□□ -1.92
CD44-234ENST00000531873 ADIPOQQ15848 244 aa3.06□□□□□ -1.92
CD44-234ENST00000531873 C2orf68Q2NKX9 166 aa3.06□□□□□ -1.92
CD44-234ENST00000531873 USP41Q3LFD5 358 aa3.06□□□□□ -1.92
CD44-234ENST00000531873 KRTAP15-1Q3LI76 137 aa3.06□□□□□ -1.92
CD44-234ENST00000531873 C1orf141Q5JVX7 400 aa3.06□□□□□ -1.92
CD44-234ENST00000531873 PIK3CD-AS1Q5SR53 167 aa3.06□□□□□ -1.92
CD44-234ENST00000531873 LRIF1Q5T3J3 769 aa3.06□□□□□ -1.92
CD44-234ENST00000531873 KIAA1614Q5VZ46 1190 aa3.06□□□□□ -1.92
CD44-234ENST00000531873 TMEM198Q66K66 360 aa3.06□□□□□ -1.92
CD44-234ENST00000531873 ACSM2BQ68CK6 577 aa3.06□□□□□ -1.92
CD44-234ENST00000531873 CES5AQ6NT32 575 aa3.06□□□□□ -1.92
CD44-234ENST00000531873 ANKRD54Q6NXT1 300 aa3.06□□□□□ -1.92
CD44-234ENST00000531873 ZNF788Q6ZQV5 615 aa3.06□□□□□ -1.92
CD44-234ENST00000531873 TRILQ7L0X0 811 aa3.06□□□□□ -1.92
CD44-234ENST00000531873 MRGPRGQ86SM5 289 aa3.06□□□□□ -1.92
CD44-234ENST00000531873 TSPAN33Q86UF1 283 aa3.06□□□□□ -1.92
CD44-234ENST00000531873 DNAJC10Q8IXB1 793 aa3.06□□□□□ -1.92
CD44-234ENST00000531873 RNF168Q8IYW5 571 aaPredicted RBP3.06□□□□□ -1.92
CD44-234ENST00000531873 WDR17Q8IZU2 1322 aa3.06□□□□□ -1.92
CD44-234ENST00000531873 FAM185AQ8N0U4 392 aa3.06□□□□□ -1.92
CD44-234ENST00000531873 ZCCHC9Q8N567 271 aaKnown RBP3.06□□□□□ -1.92
CD44-234ENST00000531873 ZBTB8BQ8NAP8 495 aaPredicted RBP3.06□□□□□ -1.92
CD44-234ENST00000531873 TDRD5Q8NAT2 981 aaKnown RBP3.06□□□□□ -1.92
CD44-234ENST00000531873 Q8NFD4 153 aa3.06□□□□□ -1.92
CD44-234ENST00000531873 BEST2Q8NFU1 509 aa3.06□□□□□ -1.92
CD44-234ENST00000531873 OR14L1PQ8NHC6 308 aa3.06□□□□□ -1.92
CD44-234ENST00000531873 IGSF8Q969P0 613 aa3.06□□□□□ -1.92
CD44-234ENST00000531873 VOPP1Q96AW1 172 aa3.06□□□□□ -1.92
CD44-234ENST00000531873 MSI2Q96DH6 328 aaKnown RBP3.06□□□□□ -1.92
CD44-234ENST00000531873 RRNAD1Q96FB5 475 aaKnown RBP3.06□□□□□ -1.92
CD44-234ENST00000531873 CCDC34Q96HJ3 373 aa3.06□□□□□ -1.92
CD44-234ENST00000531873 TMEM68Q96MH6 324 aa3.06□□□□□ -1.92
CD44-234ENST00000531873 DGAT2Q96PD7 388 aa3.06□□□□□ -1.92
CD44-234ENST00000531873 SLITRK1Q96PX8 696 aa3.06□□□□□ -1.92
CD44-234ENST00000531873 SEPT5Q99719 369 aaPredicted RBP3.06□□□□□ -1.92
CD44-234ENST00000531873 NCAPGQ9BPX3 1015 aa3.06□□□□□ -1.92
CD44-234ENST00000531873 FAM110AQ9BQ89 295 aa3.06□□□□□ -1.92
CD44-234ENST00000531873 WDR83Q9BRX9 315 aaKnown RBP3.06□□□□□ -1.92
CD44-234ENST00000531873 MSTO1Q9BUK6 570 aa3.06□□□□□ -1.92
CD44-234ENST00000531873 IFIH1Q9BYX4 1025 aaKnown RBP3.06□□□□□ -1.92
CD44-234ENST00000531873 CDT1Q9H211 546 aa3.06□□□□□ -1.92
CD44-234ENST00000531873 HRH4Q9H3N8 390 aa3.06□□□□□ -1.92
CD44-234ENST00000531873 R3HDMLQ9H3Y0 253 aa3.06□□□□□ -1.92
CD44-234ENST00000531873 MAP6D1Q9H9H5 199 aa3.06□□□□□ -1.92
CD44-234ENST00000531873 SLC28A3Q9HAS3 691 aa3.06□□□□□ -1.92
CD44-234ENST00000531873 TMEM45AQ9NWC5 275 aa3.06□□□□□ -1.92
CD44-234ENST00000531873 TAB2Q9NYJ8 693 aa3.06□□□□□ -1.92
CD44-234ENST00000531873 CPSF2Q9P2I0 782 aaKnown RBP3.06□□□□□ -1.92
CD44-234ENST00000531873 WDR35Q9P2L0 1181 aa3.06□□□□□ -1.92
CD44-234ENST00000531873 INSL6Q9Y581 213 aa3.06□□□□□ -1.92
CD44-234ENST00000531873 RAI2Q9Y5P3 530 aa3.06□□□□□ -1.92
CD44-234ENST00000531873 TRPV2Q9Y5S1 764 aa3.06□□□□□ -1.92
CD44-234ENST00000531873 CEPT1Q9Y6K0 416 aa3.06□□□□□ -1.92
CD44-234ENST00000531873 MAU2Q9Y6X3 613 aa3.06□□□□□ -1.92
CD44-234ENST00000531873 TTBK1Q5TCY1 1321 aaPredicted RBP3.05□□□□□ -1.92
CD44-234ENST00000531873 LNP1A1A4G5 178 aa3.05□□□□□ -1.92
CD44-234ENST00000531873 C1orf226A1L170 272 aa3.05□□□□□ -1.92
CD44-234ENST00000531873 KIF1CO43896 1103 aaKnown RBP3.05□□□□□ -1.92
CD44-234ENST00000531873 ATG13O75143 517 aa3.05□□□□□ -1.92
CD44-234ENST00000531873 CNOT3O75175 753 aaKnown RBP3.05□□□□□ -1.92
CD44-234ENST00000531873 BCAR3O75815 825 aa3.05□□□□□ -1.92
CD44-234ENST00000531873 PSMD10O75832 226 aa3.05□□□□□ -1.92
CD44-234ENST00000531873 RGS11O94810 467 aa3.05□□□□□ -1.92
CD44-234ENST00000531873 MMP2P08253 660 aa3.05□□□□□ -1.92
CD44-234ENST00000531873 CYC1P08574 325 aa3.05□□□□□ -1.92
CD44-234ENST00000531873 MYZAPP0CAP1 466 aa3.05□□□□□ -1.92
CD44-234ENST00000531873 CTSAP10619 480 aa3.05□□□□□ -1.92
CD44-234ENST00000531873 CHRNB1P11230 501 aa3.05□□□□□ -1.92
CD44-234ENST00000531873 MMP9P14780 707 aa3.05□□□□□ -1.92
CD44-234ENST00000531873 ANXA7P20073 488 aaKnown RBP3.05□□□□□ -1.92
CD44-234ENST00000531873 ATP5F1P24539 256 aaPredicted RBP3.05□□□□□ -1.92
CD44-234ENST00000531873 RFC1P35251 1148 aaPredicted RBP3.05□□□□□ -1.92
CD44-234ENST00000531873 COPB2P35606 906 aa3.05□□□□□ -1.92
CD44-234ENST00000531873 SUOXP51687 545 aa3.05□□□□□ -1.92
CD44-234ENST00000531873 STAT2P52630 851 aa3.05□□□□□ -1.92
CD44-234ENST00000531873 TAS2R40P59535 323 aa3.05□□□□□ -1.92
CD44-234ENST00000531873 RPS13P62277 151 aaKnown RBP3.05□□□□□ -1.92
CD44-234ENST00000531873 MRPS5P82675 430 aaKnown RBP3.05□□□□□ -1.92
CD44-234ENST00000531873 CXCL9Q07325 125 aa3.05□□□□□ -1.92
CD44-234ENST00000531873 NAE1Q13564 534 aa3.05□□□□□ -1.92
CD44-234ENST00000531873 GRAPQ13588 217 aa3.05□□□□□ -1.92
CD44-234ENST00000531873 BAATQ14032 418 aaPredicted RBP3.05□□□□□ -1.92
CD44-234ENST00000531873 LPIN1Q14693 890 aa3.05□□□□□ -1.92
CD44-234ENST00000531873 KRT24Q2M2I5 525 aa3.05□□□□□ -1.92
CD44-234ENST00000531873 ZSCAN23Q3MJ62 389 aa3.05□□□□□ -1.92
CD44-234ENST00000531873 CEP78Q5JTW2 689 aa3.05□□□□□ -1.92
CD44-234ENST00000531873 C6orf10Q5SRN2 563 aa3.05□□□□□ -1.92
CD44-234ENST00000531873 KRT79Q5XKE5 535 aa3.05□□□□□ -1.92
CD44-234ENST00000531873 PLEKHA7Q6IQ23 1121 aa3.05□□□□□ -1.92
CD44-234ENST00000531873 HMBOX1Q6NT76 420 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms