RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 TMEM11P17152 192 aa4.55□□□□□ -1.68
USP47-211ENST00000531513 PTPN2P17706 415 aa4.55□□□□□ -1.68
USP47-211ENST00000531513 MSH2P43246 934 aa4.55□□□□□ -1.68
USP47-211ENST00000531513 CAPZA2P47755 286 aa4.55□□□□□ -1.68
USP47-211ENST00000531513 SOX2P48431 317 aa4.55□□□□□ -1.68
USP47-211ENST00000531513 CYP2J2P51589 502 aa4.55□□□□□ -1.68
USP47-211ENST00000531513 STAT2P52630 851 aa4.55□□□□□ -1.68
USP47-211ENST00000531513 F2RL1P55085 397 aa4.55□□□□□ -1.68
USP47-211ENST00000531513 PLIN5Q00G26 463 aa4.55□□□□□ -1.68
USP47-211ENST00000531513 PPARDQ03181 441 aa4.55□□□□□ -1.68
USP47-211ENST00000531513 RUNX2Q13950 521 aa4.55□□□□□ -1.68
USP47-211ENST00000531513 BAATQ14032 418 aaPredicted RBP4.55□□□□□ -1.68
USP47-211ENST00000531513 COG2Q14746 738 aa4.55□□□□□ -1.68
USP47-211ENST00000531513 KPNB1Q14974 876 aaKnown RBP4.55□□□□□ -1.68
USP47-211ENST00000531513 ME3Q16798 604 aa4.55□□□□□ -1.68
USP47-211ENST00000531513 ASTE1Q2TB18 679 aaPredicted RBP4.55□□□□□ -1.68
USP47-211ENST00000531513 C9orf152Q5JTZ5 239 aa4.55□□□□□ -1.68
USP47-211ENST00000531513 UEVLDQ8IX04 471 aa4.55□□□□□ -1.68
USP47-211ENST00000531513 Q8NFD4 153 aa4.55□□□□□ -1.68
USP47-211ENST00000531513 GOT1L1Q8NHS2 421 aaPredicted RBP4.55□□□□□ -1.68
USP47-211ENST00000531513 MAP4K1Q92918 833 aa4.55□□□□□ -1.68
USP47-211ENST00000531513 PABPC5Q96DU9 382 aaKnown RBP4.55□□□□□ -1.68
USP47-211ENST00000531513 LYZL4Q96KX0 146 aa4.55□□□□□ -1.68
USP47-211ENST00000531513 SRSF8Q9BRL6 282 aaKnown RBP4.55□□□□□ -1.68
USP47-211ENST00000531513 IFT27Q9BW83 186 aa4.55□□□□□ -1.68
USP47-211ENST00000531513 ABCF3Q9NUQ8 709 aa4.55□□□□□ -1.68
USP47-211ENST00000531513 TMEM184CQ9NVA4 438 aa4.55□□□□□ -1.68
USP47-211ENST00000531513 ARL8BQ9NVJ2 186 aa4.55□□□□□ -1.68
USP47-211ENST00000531513 OGFRQ9NZT2 677 aa4.55□□□□□ -1.68
USP47-211ENST00000531513 CTNNAL1Q9UBT7 734 aa4.55□□□□□ -1.68
USP47-211ENST00000531513 ZMYM2Q9UBW7 1377 aa4.54□□□□□ -1.68
USP47-211ENST00000531513 FAM237AA0A1B0GTK4 181 aa4.54□□□□□ -1.68
USP47-211ENST00000531513 CBY3A6NI87 242 aa4.54□□□□□ -1.68
USP47-211ENST00000531513 FAM157AC9JC47 383 aa4.54□□□□□ -1.68
USP47-211ENST00000531513 NPIPB11E5RHQ5 1161 aa4.54□□□□□ -1.68
USP47-211ENST00000531513 H3BNX3 289 aa4.54□□□□□ -1.68
USP47-211ENST00000531513 SEC14L5O43304 696 aa4.54□□□□□ -1.68
USP47-211ENST00000531513 HCRTR2O43614 444 aa4.54□□□□□ -1.68
USP47-211ENST00000531513 HS6ST1O60243 411 aa4.54□□□□□ -1.68
USP47-211ENST00000531513 NDUFS3O75489 264 aa4.54□□□□□ -1.68
USP47-211ENST00000531513 SLC25A12O75746 678 aa4.54□□□□□ -1.68
USP47-211ENST00000531513 IFNAR1P17181 557 aa4.54□□□□□ -1.68
USP47-211ENST00000531513 EDN2P20800 178 aa4.54□□□□□ -1.68
USP47-211ENST00000531513 THPOP40225 353 aa4.54□□□□□ -1.68
USP47-211ENST00000531513 TNNT3P45378 269 aaPredicted RBP4.54□□□□□ -1.68
USP47-211ENST00000531513 CAMPP49913 170 aa4.54□□□□□ -1.68
USP47-211ENST00000531513 LIG4P49917 911 aa4.54□□□□□ -1.68
USP47-211ENST00000531513 HDAC4P56524 1084 aa4.54□□□□□ -1.68
USP47-211ENST00000531513 IKQ13123 557 aaPredicted RBP4.54□□□□□ -1.68
USP47-211ENST00000531513 CC2D1BQ5T0F9 858 aaKnown RBP4.54□□□□□ -1.68
USP47-211ENST00000531513 TBC1D9BQ66K14 1250 aa4.54□□□□□ -1.68
USP47-211ENST00000531513 KRT80Q6KB66 452 aa4.54□□□□□ -1.68
USP47-211ENST00000531513 CLEC17AQ6ZS10 378 aa4.54□□□□□ -1.68
USP47-211ENST00000531513 MFSD6Q6ZSS7 791 aa4.54□□□□□ -1.68
USP47-211ENST00000531513 PLPPR4Q7Z2D5 763 aa4.54□□□□□ -1.68
USP47-211ENST00000531513 TFAP2DQ7Z6R9 452 aa4.54□□□□□ -1.68
USP47-211ENST00000531513 DNAJB7Q7Z6W7 309 aaPredicted RBP4.54□□□□□ -1.68
USP47-211ENST00000531513 KBTBD6Q86V97 674 aa4.54□□□□□ -1.68
USP47-211ENST00000531513 DHX40Q8IX18 779 aaKnown RBP4.54□□□□□ -1.68
USP47-211ENST00000531513 OR8H3Q8N146 312 aa4.54□□□□□ -1.68
USP47-211ENST00000531513 ZNF713Q8N859 430 aaPredicted RBP4.54□□□□□ -1.68
USP47-211ENST00000531513 FAM47BQ8NA70 645 aa4.54□□□□□ -1.68
USP47-211ENST00000531513 ZNF548Q8NEK5 533 aaPredicted RBP4.54□□□□□ -1.68
USP47-211ENST00000531513 APPL2Q8NEU8 664 aa4.54□□□□□ -1.68
USP47-211ENST00000531513 GSDMBQ8TAX9 411 aa4.54□□□□□ -1.68
USP47-211ENST00000531513 HDAC7Q8WUI4 952 aa4.54□□□□□ -1.68
USP47-211ENST00000531513 FAR1Q8WVX9 515 aa4.54□□□□□ -1.68
USP47-211ENST00000531513 ZFPM2Q8WW38 1151 aa4.54□□□□□ -1.68
USP47-211ENST00000531513 VPS33AQ96AX1 596 aa4.54□□□□□ -1.68
USP47-211ENST00000531513 JAKMIP1Q96N16 626 aaKnown RBP4.54□□□□□ -1.68
USP47-211ENST00000531513 OR2A14Q96R47 310 aa4.54□□□□□ -1.68
USP47-211ENST00000531513 DESI2Q9BSY9 194 aa4.54□□□□□ -1.68
USP47-211ENST00000531513 TUBB6Q9BUF5 446 aa4.54□□□□□ -1.68
USP47-211ENST00000531513 MRPL1Q9BYD6 325 aaKnown RBP4.54□□□□□ -1.68
USP47-211ENST00000531513 OSGEPL1Q9H4B0 414 aa4.54□□□□□ -1.68
USP47-211ENST00000531513 RANGRFQ9HD47 186 aaPredicted RBP4.54□□□□□ -1.68
USP47-211ENST00000531513 POT1Q9NUX5 634 aa4.54□□□□□ -1.68
USP47-211ENST00000531513 WSB2Q9NYS7 404 aaPredicted RBP4.54□□□□□ -1.68
USP47-211ENST00000531513 HEY2Q9UBP5 337 aa4.54□□□□□ -1.68
USP47-211ENST00000531513 SEL1LQ9UBV2 794 aa4.54□□□□□ -1.68
USP47-211ENST00000531513 GTF3C4Q9UKN8 822 aa4.54□□□□□ -1.68
USP47-211ENST00000531513 PADI1Q9ULC6 663 aa4.54□□□□□ -1.68
USP47-211ENST00000531513 FAM96BQ9Y3D0 163 aa4.54□□□□□ -1.68
USP47-211ENST00000531513 TRPV2Q9Y5S1 764 aa4.54□□□□□ -1.68
USP47-211ENST00000531513 SQORQ9Y6N5 450 aa4.54□□□□□ -1.68
USP47-211ENST00000531513 MST1RQ04912 1400 aa4.54□□□□□ -1.68
USP47-211ENST00000531513 FLT1P17948 1338 aa4.53□□□□□ -1.68
USP47-211ENST00000531513 A0A0A0MQY5 61 aa4.53□□□□□ -1.68
USP47-211ENST00000531513 RRHO14718 337 aa4.53□□□□□ -1.68
USP47-211ENST00000531513 ADAMDEC1O15204 470 aa4.53□□□□□ -1.68
USP47-211ENST00000531513 PAPSS1O43252 624 aaPredicted RBP4.53□□□□□ -1.68
USP47-211ENST00000531513 TPPPO94811 219 aa4.53□□□□□ -1.68
USP47-211ENST00000531513 GGPS1O95749 300 aa4.53□□□□□ -1.68
USP47-211ENST00000531513 MT-CYBP00156 380 aaPredicted RBP4.53□□□□□ -1.68
USP47-211ENST00000531513 CRYABP02511 175 aaKnown RBP4.53□□□□□ -1.68
USP47-211ENST00000531513 GALCP54803 685 aa4.53□□□□□ -1.68
USP47-211ENST00000531513 CLDN2P57739 230 aa4.53□□□□□ -1.68
USP47-211ENST00000531513 MRPS5P82675 430 aaKnown RBP4.53□□□□□ -1.68
USP47-211ENST00000531513 SHBQ15464 509 aa4.53□□□□□ -1.68
USP47-211ENST00000531513 C15orf59Q2T9L4 293 aaPredicted RBP4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms