RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 LIMA1Q9UHB6 759 aaKnown RBP15.88■□□□□ 0.13
CHMP4A-204ENST00000530996 RNF215Q9Y6U7 377 aa15.88■□□□□ 0.13
CHMP4A-204ENST00000530996 PRSS38A1L453 326 aa15.87■□□□□ 0.13
CHMP4A-204ENST00000530996 EIF3CLB5ME19 914 aaKnown RBP15.87■□□□□ 0.13
CHMP4A-204ENST00000530996 RNF8O76064 485 aa15.87■□□□□ 0.13
CHMP4A-204ENST00000530996 LIPCP11150 499 aa15.87■□□□□ 0.13
CHMP4A-204ENST00000530996 ITIH1P19827 911 aa15.87■□□□□ 0.13
CHMP4A-204ENST00000530996 TNFAIP3P21580 790 aa15.87■□□□□ 0.13
CHMP4A-204ENST00000530996 CSNK1DP48730 415 aa15.87■□□□□ 0.13
CHMP4A-204ENST00000530996 AP1S1P61966 158 aa15.87■□□□□ 0.13
CHMP4A-204ENST00000530996 POLR2LP62875 67 aaKnown RBP15.87■□□□□ 0.13
CHMP4A-204ENST00000530996 NFATC3Q12968 1075 aa15.87■□□□□ 0.13
CHMP4A-204ENST00000530996 AGERQ15109 404 aa15.87■□□□□ 0.13
CHMP4A-204ENST00000530996 TGIF1Q15583 401 aa15.87■□□□□ 0.13
CHMP4A-204ENST00000530996 TSR1Q2NL82 804 aaKnown RBP15.87■□□□□ 0.13
CHMP4A-204ENST00000530996 AMZ1Q400G9 498 aa15.87■□□□□ 0.13
CHMP4A-204ENST00000530996 TMCO4Q5TGY1 634 aa15.87■□□□□ 0.13
CHMP4A-204ENST00000530996 PPP1R2P3Q6NXS1 205 aa15.87■□□□□ 0.13
CHMP4A-204ENST00000530996 LIPIQ6XZB0 460 aa15.87■□□□□ 0.13
CHMP4A-204ENST00000530996 ARHGAP36Q6ZRI8 547 aa15.87■□□□□ 0.13
CHMP4A-204ENST00000530996 NPWQ8N729 165 aa15.87■□□□□ 0.13
CHMP4A-204ENST00000530996 EIF3CQ99613 913 aaKnown RBP15.87■□□□□ 0.13
CHMP4A-204ENST00000530996 CMKLR1Q99788 373 aa15.87■□□□□ 0.13
CHMP4A-204ENST00000530996 TMEM168Q9H0V1 697 aa15.87■□□□□ 0.13
CHMP4A-204ENST00000530996 CARS2Q9HA77 564 aaKnown RBP15.87■□□□□ 0.13
CHMP4A-204ENST00000530996 B4GALT6Q9UBX8 382 aa15.87■□□□□ 0.13
CHMP4A-204ENST00000530996 SEPT3Q9UH03 358 aa15.87■□□□□ 0.13
CHMP4A-204ENST00000530996 SETXQ7Z333 2677 aaKnown RBP15.86■□□□□ 0.13
CHMP4A-204ENST00000530996 CHD5Q8TDI0 1954 aa15.86■□□□□ 0.13
CHMP4A-204ENST00000530996 PRAMEF33A0A0G2JMD5 474 aa15.86■□□□□ 0.13
CHMP4A-204ENST00000530996 PDE2AO00408 941 aaPredicted RBP15.86■□□□□ 0.13
CHMP4A-204ENST00000530996 NOBOXO60393 691 aa15.86■□□□□ 0.13
CHMP4A-204ENST00000530996 PRAMEF10O60809 474 aa15.86■□□□□ 0.13
CHMP4A-204ENST00000530996 CPP00450 1065 aa15.86■□□□□ 0.13
CHMP4A-204ENST00000530996 ERCC2P18074 760 aa15.86■□□□□ 0.13
CHMP4A-204ENST00000530996 PPM1FP49593 454 aaPredicted RBP15.86■□□□□ 0.13
CHMP4A-204ENST00000530996 RENBPP51606 427 aa15.86■□□□□ 0.13
CHMP4A-204ENST00000530996 ILF3Q12906 894 aaKnown RBP eCLIP15.86■□□□□ 0.13
CHMP4A-204ENST00000530996 MAMLD1Q13495 774 aa15.86■□□□□ 0.13
CHMP4A-204ENST00000530996 RFTN1Q14699 578 aaPredicted RBP15.86■□□□□ 0.13
CHMP4A-204ENST00000530996 LBRQ14739 615 aaKnown RBP15.86■□□□□ 0.13
CHMP4A-204ENST00000530996 MANEAQ5SRI9 462 aa15.86■□□□□ 0.13
CHMP4A-204ENST00000530996 ERMARDQ5T6L9 678 aa15.86■□□□□ 0.13
CHMP4A-204ENST00000530996 VASH2Q86V25 355 aa15.86■□□□□ 0.13
CHMP4A-204ENST00000530996 SFTPA2Q8IWL1 248 aa15.86■□□□□ 0.13
CHMP4A-204ENST00000530996 SGF29Q96ES7 293 aa15.86■□□□□ 0.13
CHMP4A-204ENST00000530996 ERGIC2Q96RQ1 377 aa15.86■□□□□ 0.13
CHMP4A-204ENST00000530996 PEBP4Q96S96 227 aa15.86■□□□□ 0.13
CHMP4A-204ENST00000530996 FAM117AQ9C073 453 aa15.86■□□□□ 0.13
CHMP4A-204ENST00000530996 PHPT1Q9NRX4 125 aaPredicted RBP15.86■□□□□ 0.13
CHMP4A-204ENST00000530996 APPL1Q9UKG1 709 aa15.86■□□□□ 0.13
CHMP4A-204ENST00000530996 SSUH2Q9Y2M2 353 aa15.86■□□□□ 0.13
CHMP4A-204ENST00000530996 PCDHB11Q9Y5F2 797 aa15.86■□□□□ 0.13
CHMP4A-204ENST00000530996 FLNBO75369 2602 aaKnown RBP15.85■□□□□ 0.13
CHMP4A-204ENST00000530996 ASH1LQ9NR48 2969 aaKnown RBP15.85■□□□□ 0.13
CHMP4A-204ENST00000530996 CFAP69A5D8W1 941 aa15.85■□□□□ 0.13
CHMP4A-204ENST00000530996 RHPN2P1A8MT19 583 aa15.85■□□□□ 0.13
CHMP4A-204ENST00000530996 TNFRSF10CO14798 259 aa15.85■□□□□ 0.13
CHMP4A-204ENST00000530996 MYCLP1P12525 358 aaPredicted RBP15.85■□□□□ 0.13
CHMP4A-204ENST00000530996 NFKBIAP25963 317 aa15.85■□□□□ 0.13
CHMP4A-204ENST00000530996 MAZP56270 477 aaKnown RBP15.85■□□□□ 0.13
CHMP4A-204ENST00000530996 IL10RBQ08334 325 aa15.85■□□□□ 0.13
CHMP4A-204ENST00000530996 SRSF6Q13247 344 aaKnown RBP15.85■□□□□ 0.13
CHMP4A-204ENST00000530996 HLTFQ14527 1009 aaKnown RBP eCLIP15.85■□□□□ 0.13
CHMP4A-204ENST00000530996 ASIC2Q16515 512 aa15.85■□□□□ 0.13
CHMP4A-204ENST00000530996 HEATR4Q86WZ0 1026 aa15.85■□□□□ 0.13
CHMP4A-204ENST00000530996 ARHGAP12Q8IWW6 846 aa15.85■□□□□ 0.13
CHMP4A-204ENST00000530996 CCL4L1Q8NHW4 92 aa15.85■□□□□ 0.13
CHMP4A-204ENST00000530996 TMEM159Q96B96 161 aa15.85■□□□□ 0.13
CHMP4A-204ENST00000530996 ZNF653Q96CK0 615 aa15.85■□□□□ 0.13
CHMP4A-204ENST00000530996 ECHDC3Q96DC8 303 aa15.85■□□□□ 0.13
CHMP4A-204ENST00000530996 LGR4Q9BXB1 951 aa15.85■□□□□ 0.13
CHMP4A-204ENST00000530996 ZWILCHQ9H900 591 aa15.85■□□□□ 0.13
CHMP4A-204ENST00000530996 RDH14Q9HBH5 336 aa15.85■□□□□ 0.13
CHMP4A-204ENST00000530996 FOXJ2Q9P0K8 574 aa15.85■□□□□ 0.13
CHMP4A-204ENST00000530996 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.84■□□□□ 0.13
CHMP4A-204ENST00000530996 TTC24A2A3L6 582 aaPredicted RBP15.84■□□□□ 0.13
CHMP4A-204ENST00000530996 H3BRJ5 948 aa15.84■□□□□ 0.13
CHMP4A-204ENST00000530996 NVLO15381 856 aaKnown RBP15.84■□□□□ 0.13
CHMP4A-204ENST00000530996 EFSO43281 561 aa15.84■□□□□ 0.13
CHMP4A-204ENST00000530996 NUDT21O43809 227 aaKnown RBP15.84■□□□□ 0.13
CHMP4A-204ENST00000530996 ALDH4A1P30038 563 aa15.84■□□□□ 0.13
CHMP4A-204ENST00000530996 MIPP30301 263 aa15.84■□□□□ 0.13
CHMP4A-204ENST00000530996 GNPDA1P46926 289 aa15.84■□□□□ 0.13
CHMP4A-204ENST00000530996 AFMIDQ63HM1 303 aa15.84■□□□□ 0.13
CHMP4A-204ENST00000530996 RAET1GQ6H3X3 334 aa15.84■□□□□ 0.13
CHMP4A-204ENST00000530996 PNCKQ6P2M8 343 aa15.84■□□□□ 0.13
CHMP4A-204ENST00000530996 DOK6Q6PKX4 331 aa15.84■□□□□ 0.13
CHMP4A-204ENST00000530996 SLC30A9Q6PML9 568 aa15.84■□□□□ 0.13
CHMP4A-204ENST00000530996 ZFAND4Q86XD8 727 aa15.84■□□□□ 0.13
CHMP4A-204ENST00000530996 BBS5Q8N3I7 341 aa15.84■□□□□ 0.13
CHMP4A-204ENST00000530996 ATPAF2Q8N5M1 289 aa15.84■□□□□ 0.13
CHMP4A-204ENST00000530996 AOPEPQ8N6M6 819 aa15.84■□□□□ 0.13
CHMP4A-204ENST00000530996 ZSCAN1Q8NBB4 408 aa15.84■□□□□ 0.13
CHMP4A-204ENST00000530996 ZDHHC1Q8WTX9 485 aa15.84■□□□□ 0.13
CHMP4A-204ENST00000530996 EXTL1Q92935 676 aa15.84■□□□□ 0.13
CHMP4A-204ENST00000530996 USP7Q93009 1102 aa15.84■□□□□ 0.13
CHMP4A-204ENST00000530996 GSDMCQ9BYG8 508 aa15.84■□□□□ 0.13
CHMP4A-204ENST00000530996 CLMPQ9H6B4 373 aa15.84■□□□□ 0.13
CHMP4A-204ENST00000530996 LMBRD1Q9NUN5 540 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms