RNA–Protein interactions for RNA: ENST00000528484.5

CMTM1-211, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 726 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-211ENST00000528484 FUBP1Q96AE4 644 aaKnown RBP11.6□□□□□ -0.55
CMTM1-211ENST00000528484 KIAA1143Q96AT1 154 aaPredicted RBP11.6□□□□□ -0.55
CMTM1-211ENST00000528484 C11orf70Q9BRQ4 267 aa11.6□□□□□ -0.55
CMTM1-211ENST00000528484 TUBGCP2Q9BSJ2 902 aa11.6□□□□□ -0.55
CMTM1-211ENST00000528484 FUCA2Q9BTY2 467 aa11.6□□□□□ -0.55
CMTM1-211ENST00000528484 STK33Q9BYT3 514 aa11.6□□□□□ -0.55
CMTM1-211ENST00000528484 SEMA6CQ9H3T2 930 aa11.6□□□□□ -0.55
CMTM1-211ENST00000528484 SUDS3Q9H7L9 328 aaPredicted RBP11.6□□□□□ -0.55
CMTM1-211ENST00000528484 CARS2Q9HA77 564 aaKnown RBP11.6□□□□□ -0.55
CMTM1-211ENST00000528484 FGF22Q9HCT0 170 aa11.6□□□□□ -0.55
CMTM1-211ENST00000528484 MRPL40Q9NQ50 206 aaKnown RBP11.6□□□□□ -0.55
CMTM1-211ENST00000528484 PHPT1Q9NRX4 125 aaPredicted RBP11.6□□□□□ -0.55
CMTM1-211ENST00000528484 LHX3Q9UBR4 397 aa11.6□□□□□ -0.55
CMTM1-211ENST00000528484 DACH1Q9UI36 760 aa11.6□□□□□ -0.55
CMTM1-211ENST00000528484 LRRK2Q5S007 2527 aa11.6□□□□□ -0.55
CMTM1-211ENST00000528484 LRRK1Q38SD2 2015 aa11.6□□□□□ -0.55
CMTM1-211ENST00000528484 ANKRD36A6QL64 1941 aa11.59□□□□□ -0.55
CMTM1-211ENST00000528484 PRSS38A1L453 326 aa11.59□□□□□ -0.55
CMTM1-211ENST00000528484 ARHGAP42A6NI28 874 aa11.59□□□□□ -0.55
CMTM1-211ENST00000528484 F8VZ95 297 aa11.59□□□□□ -0.55
CMTM1-211ENST00000528484 TEX33O43247 280 aa11.59□□□□□ -0.55
CMTM1-211ENST00000528484 PALMO75781 387 aa11.59□□□□□ -0.55
CMTM1-211ENST00000528484 TPM2P07951 284 aa11.59□□□□□ -0.55
CMTM1-211ENST00000528484 GP1BBP13224 206 aa11.59□□□□□ -0.55
CMTM1-211ENST00000528484 CCNB1P14635 433 aa11.59□□□□□ -0.55
CMTM1-211ENST00000528484 HTR7P34969 479 aa11.59□□□□□ -0.55
CMTM1-211ENST00000528484 HDAC4P56524 1084 aa11.59□□□□□ -0.55
CMTM1-211ENST00000528484 OR1D5P58170 312 aa11.59□□□□□ -0.55
CMTM1-211ENST00000528484 B4GALNT1Q00973 533 aa11.59□□□□□ -0.55
CMTM1-211ENST00000528484 CDR2Q01850 454 aa11.59□□□□□ -0.55
CMTM1-211ENST00000528484 SEPT6Q14141 434 aa11.59□□□□□ -0.55
CMTM1-211ENST00000528484 ACOX1Q15067 660 aa11.59□□□□□ -0.55
CMTM1-211ENST00000528484 DCAF12Q5T6F0 453 aa11.59□□□□□ -0.55
CMTM1-211ENST00000528484 PHLDB2Q86SQ0 1253 aa11.59□□□□□ -0.55
CMTM1-211ENST00000528484 FAM129CQ86XR2 697 aa11.59□□□□□ -0.55
CMTM1-211ENST00000528484 CAMK1DQ8IU85 385 aa11.59□□□□□ -0.55
CMTM1-211ENST00000528484 NETO2Q8NC67 525 aa11.59□□□□□ -0.55
CMTM1-211ENST00000528484 PLA2G15Q8NCC3 412 aa11.59□□□□□ -0.55
CMTM1-211ENST00000528484 RCBTB1Q8NDN9 531 aa11.59□□□□□ -0.55
CMTM1-211ENST00000528484 C9orf43Q8TAL5 461 aaPredicted RBP11.59□□□□□ -0.55
CMTM1-211ENST00000528484 CENPIQ92674 756 aaPredicted RBP11.59□□□□□ -0.55
CMTM1-211ENST00000528484 NKD1Q969G9 470 aa11.59□□□□□ -0.55
CMTM1-211ENST00000528484 CCDC74BQ96LY2 380 aa11.59□□□□□ -0.55
CMTM1-211ENST00000528484 DDA1Q9BW61 102 aa11.59□□□□□ -0.55
CMTM1-211ENST00000528484 CINPQ9BW66 212 aaPredicted RBP11.59□□□□□ -0.55
CMTM1-211ENST00000528484 CDH19Q9H159 772 aa11.59□□□□□ -0.55
CMTM1-211ENST00000528484 ADAM22Q9P0K1 906 aa11.59□□□□□ -0.55
CMTM1-211ENST00000528484 NEU3Q9UQ49 428 aa11.59□□□□□ -0.55
CMTM1-211ENST00000528484 PCDHGA3Q9Y5H0 932 aa11.59□□□□□ -0.55
CMTM1-211ENST00000528484 ARHGEF17Q96PE2 2063 aaPredicted RBP11.58□□□□□ -0.56
CMTM1-211ENST00000528484 A0A1W2PQ67 120 aa11.58□□□□□ -0.56
CMTM1-211ENST00000528484 GFPT2O94808 682 aa11.58□□□□□ -0.56
CMTM1-211ENST00000528484 CALB1P05937 261 aa11.58□□□□□ -0.56
CMTM1-211ENST00000528484 MYCLP1P12525 358 aaPredicted RBP11.58□□□□□ -0.56
CMTM1-211ENST00000528484 CCL4P13236 92 aa11.58□□□□□ -0.56
CMTM1-211ENST00000528484 WT1P19544 449 aaPredicted RBP11.58□□□□□ -0.56
CMTM1-211ENST00000528484 ERCC5P28715 1186 aaPredicted RBP11.58□□□□□ -0.56
CMTM1-211ENST00000528484 CASRP41180 1078 aa11.58□□□□□ -0.56
CMTM1-211ENST00000528484 MAZP56270 477 aaKnown RBP11.58□□□□□ -0.56
CMTM1-211ENST00000528484 TPI1P60174 286 aa11.58□□□□□ -0.56
CMTM1-211ENST00000528484 MC1RQ01726 317 aa11.58□□□□□ -0.56
CMTM1-211ENST00000528484 NCAPHQ15003 741 aa11.58□□□□□ -0.56
CMTM1-211ENST00000528484 CYTH1Q15438 398 aa11.58□□□□□ -0.56
CMTM1-211ENST00000528484 SRLQ86TD4 932 aa11.58□□□□□ -0.56
CMTM1-211ENST00000528484 NRSN1Q8IZ57 195 aa11.58□□□□□ -0.56
CMTM1-211ENST00000528484 UMODL1-AS1Q8N2C9 162 aa11.58□□□□□ -0.56
CMTM1-211ENST00000528484 OR4D9Q8NGE8 314 aa11.58□□□□□ -0.56
CMTM1-211ENST00000528484 JOSD2Q8TAC2 188 aa11.58□□□□□ -0.56
CMTM1-211ENST00000528484 ART4Q93070 314 aa11.58□□□□□ -0.56
CMTM1-211ENST00000528484 VOPP1Q96AW1 172 aa11.58□□□□□ -0.56
CMTM1-211ENST00000528484 AHCYL2Q96HN2 611 aaKnown RBP11.58□□□□□ -0.56
CMTM1-211ENST00000528484 TEFMQ96QE5 360 aaKnown RBP11.58□□□□□ -0.56
CMTM1-211ENST00000528484 NUDT22Q9BRQ3 303 aa11.58□□□□□ -0.56
CMTM1-211ENST00000528484 SLC12A9Q9BXP2 914 aa11.58□□□□□ -0.56
CMTM1-211ENST00000528484 EPN3Q9H201 632 aa11.58□□□□□ -0.56
CMTM1-211ENST00000528484 SP110Q9HB58 689 aa11.58□□□□□ -0.56
CMTM1-211ENST00000528484 TRNAU1APQ9NX07 287 aaKnown RBP11.58□□□□□ -0.56
CMTM1-211ENST00000528484 SLC39A1Q9NY26 324 aa11.58□□□□□ -0.56
CMTM1-211ENST00000528484 SDK2Q58EX2 2172 aa11.57□□□□□ -0.56
CMTM1-211ENST00000528484 IGHV5-10-1A0A0J9YXX1 117 aa11.57□□□□□ -0.56
CMTM1-211ENST00000528484 GOLGA6CA6NDK9 693 aa11.57□□□□□ -0.56
CMTM1-211ENST00000528484 GOLGA6BA6NDN3 693 aa11.57□□□□□ -0.56
CMTM1-211ENST00000528484 WASH4PA8MWX3 477 aa11.57□□□□□ -0.56
CMTM1-211ENST00000528484 DAPK3O43293 454 aa11.57□□□□□ -0.56
CMTM1-211ENST00000528484 B4GAT1O43505 415 aa11.57□□□□□ -0.56
CMTM1-211ENST00000528484 RAD1O60671 282 aa11.57□□□□□ -0.56
CMTM1-211ENST00000528484 ECEL1O95672 775 aa11.57□□□□□ -0.56
CMTM1-211ENST00000528484 CYP1A1P04798 512 aaPredicted RBP11.57□□□□□ -0.56
CMTM1-211ENST00000528484 PRKCGP05129 697 aa11.57□□□□□ -0.56
CMTM1-211ENST00000528484 GOLGA6DP0CG33 693 aa11.57□□□□□ -0.56
CMTM1-211ENST00000528484 LIFP15018 202 aa11.57□□□□□ -0.56
CMTM1-211ENST00000528484 UGT1A3P35503 534 aa11.57□□□□□ -0.56
CMTM1-211ENST00000528484 TRIM23P36406 574 aa11.57□□□□□ -0.56
CMTM1-211ENST00000528484 GNPDA1P46926 289 aa11.57□□□□□ -0.56
CMTM1-211ENST00000528484 CSNK1DP48730 415 aa11.57□□□□□ -0.56
CMTM1-211ENST00000528484 RENBPP51606 427 aa11.57□□□□□ -0.56
CMTM1-211ENST00000528484 NDST2P52849 883 aa11.57□□□□□ -0.56
CMTM1-211ENST00000528484 COPB1P53618 953 aaKnown RBP11.57□□□□□ -0.56
CMTM1-211ENST00000528484 LIMK2P53671 638 aa11.57□□□□□ -0.56
CMTM1-211ENST00000528484 GPLD1P80108 840 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms