RNA–Protein interactions for RNA: ENST00000527624.1

PCDHA6-202, Transcript of protocadherin alpha 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHA6, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-202ENST00000527624 GRIA4P48058 902 aa17.33■□□□□ 0.37
PCDHA6-202ENST00000527624 CDKN2DP55273 166 aa17.33■□□□□ 0.37
PCDHA6-202ENST00000527624 HTRA4P83105 476 aaPredicted RBP17.33■□□□□ 0.37
PCDHA6-202ENST00000527624 LILRA6Q6PI73 481 aa17.33■□□□□ 0.37
PCDHA6-202ENST00000527624 GLT6D1Q7Z4J2 308 aa17.33■□□□□ 0.37
PCDHA6-202ENST00000527624 LCA5Q86VQ0 697 aa17.33■□□□□ 0.37
PCDHA6-202ENST00000527624 MFN1Q8IWA4 741 aa17.33■□□□□ 0.37
PCDHA6-202ENST00000527624 BBS7Q8IWZ6 715 aa17.33■□□□□ 0.37
PCDHA6-202ENST00000527624 KREMEN2Q8NCW0 462 aa17.33■□□□□ 0.37
PCDHA6-202ENST00000527624 SH3RF2Q8TEC5 729 aa17.33■□□□□ 0.37
PCDHA6-202ENST00000527624 DDI1Q8WTU0 396 aa17.33■□□□□ 0.37
PCDHA6-202ENST00000527624 TCF25Q9BQ70 676 aa17.33■□□□□ 0.37
PCDHA6-202ENST00000527624 LRRC3Q9BY71 257 aa17.33■□□□□ 0.37
PCDHA6-202ENST00000527624 IGSF5Q9NSI5 407 aa17.33■□□□□ 0.37
PCDHA6-202ENST00000527624 LSM7Q9UK45 103 aaKnown RBP17.33■□□□□ 0.37
PCDHA6-202ENST00000527624 PLXNA4Q9HCM2 1894 aa17.33■□□□□ 0.37
PCDHA6-202ENST00000527624 B2RBV5 119 aa17.33■□□□□ 0.36
PCDHA6-202ENST00000527624 TARM1B6A8C7 271 aa17.33■□□□□ 0.36
PCDHA6-202ENST00000527624 GFRA2O00451 464 aa17.33■□□□□ 0.36
PCDHA6-202ENST00000527624 CCL16O15467 120 aa17.33■□□□□ 0.36
PCDHA6-202ENST00000527624 DLX3O60479 287 aa17.33■□□□□ 0.36
PCDHA6-202ENST00000527624 MT-CO1P00395 513 aa17.33■□□□□ 0.36
PCDHA6-202ENST00000527624 ADH1AP07327 375 aa17.33■□□□□ 0.36
PCDHA6-202ENST00000527624 SERPINA6P08185 405 aa17.33■□□□□ 0.36
PCDHA6-202ENST00000527624 CLNS1AP54105 237 aaKnown RBP17.33■□□□□ 0.36
PCDHA6-202ENST00000527624 ERVFC1P60507 584 aa17.33■□□□□ 0.36
PCDHA6-202ENST00000527624 LAMB3Q13751 1172 aa17.33■□□□□ 0.36
PCDHA6-202ENST00000527624 ATXN7L2Q5T6C5 722 aaPredicted RBP17.33■□□□□ 0.36
PCDHA6-202ENST00000527624 LIPMQ5VYY2 423 aa17.33■□□□□ 0.36
PCDHA6-202ENST00000527624 TPGS1Q6ZTW0 290 aa17.33■□□□□ 0.36
PCDHA6-202ENST00000527624 PIM3Q86V86 326 aa17.33■□□□□ 0.36
PCDHA6-202ENST00000527624 TMPRSS6Q8IU80 811 aa17.33■□□□□ 0.36
PCDHA6-202ENST00000527624 GPR65Q8IYL9 337 aa17.33■□□□□ 0.36
PCDHA6-202ENST00000527624 MDGA1Q8NFP4 955 aa17.33■□□□□ 0.36
PCDHA6-202ENST00000527624 BADQ92934 168 aa17.33■□□□□ 0.36
PCDHA6-202ENST00000527624 CCDC106Q9BWC9 280 aa17.33■□□□□ 0.36
PCDHA6-202ENST00000527624 GPAMQ9HCL2 828 aa17.33■□□□□ 0.36
PCDHA6-202ENST00000527624 VWA7Q9Y334 891 aa17.33■□□□□ 0.36
PCDHA6-202ENST00000527624 LRRC42Q9Y546 428 aa17.33■□□□□ 0.36
PCDHA6-202ENST00000527624 OR51B4Q9Y5P0 310 aa17.33■□□□□ 0.36
PCDHA6-202ENST00000527624 A0A0U1RQS6 177 aa17.32■□□□□ 0.36
PCDHA6-202ENST00000527624 LCHNA4D1U4 455 aa17.32■□□□□ 0.36
PCDHA6-202ENST00000527624 HIDE1A8MVS5 230 aa17.32■□□□□ 0.36
PCDHA6-202ENST00000527624 TMEM114B3SHH9 223 aa17.32■□□□□ 0.36
PCDHA6-202ENST00000527624 K7ERQ8 282 aa17.32■□□□□ 0.36
PCDHA6-202ENST00000527624 CRTAMO95727 393 aa17.32■□□□□ 0.36
PCDHA6-202ENST00000527624 CPA2P48052 419 aa17.32■□□□□ 0.36
PCDHA6-202ENST00000527624 ZNF140P52738 457 aaPredicted RBP17.32■□□□□ 0.36
PCDHA6-202ENST00000527624 NAGLUP54802 743 aa17.32■□□□□ 0.36
PCDHA6-202ENST00000527624 RHOAP61586 193 aa17.32■□□□□ 0.36
PCDHA6-202ENST00000527624 TRAF2Q12933 501 aa17.32■□□□□ 0.36
PCDHA6-202ENST00000527624 UBAP2LQ14157 1087 aaKnown RBP17.32■□□□□ 0.36
PCDHA6-202ENST00000527624 SLC14A2Q15849 920 aa17.32■□□□□ 0.36
PCDHA6-202ENST00000527624 TSNAXIP1Q2TAA8 658 aa17.32■□□□□ 0.36
PCDHA6-202ENST00000527624 ZNF783Q6ZMS7 281 aa17.32■□□□□ 0.36
PCDHA6-202ENST00000527624 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.32■□□□□ 0.36
PCDHA6-202ENST00000527624 APCDD1Q8J025 514 aa17.32■□□□□ 0.36
PCDHA6-202ENST00000527624 EFHBQ8N7U6 833 aa17.32■□□□□ 0.36
PCDHA6-202ENST00000527624 TDRD5Q8NAT2 981 aaKnown RBP17.32■□□□□ 0.36
PCDHA6-202ENST00000527624 OR4K2Q8NGD2 314 aa17.32■□□□□ 0.36
PCDHA6-202ENST00000527624 SHCBP1LQ9BZQ2 653 aa17.32■□□□□ 0.36
PCDHA6-202ENST00000527624 MRPL46Q9H2W6 279 aaKnown RBP17.32■□□□□ 0.36
PCDHA6-202ENST00000527624 HCFC1R1Q9NWW0 138 aa17.32■□□□□ 0.36
PCDHA6-202ENST00000527624 GEMIN8Q9NWZ8 242 aaKnown RBP17.32■□□□□ 0.36
PCDHA6-202ENST00000527624 LHX3Q9UBR4 397 aa17.32■□□□□ 0.36
PCDHA6-202ENST00000527624 SSX2IPQ9Y2D8 614 aa17.32■□□□□ 0.36
PCDHA6-202ENST00000527624 SH3BP1Q9Y3L3 701 aa17.32■□□□□ 0.36
PCDHA6-202ENST00000527624 CCDC166P0CW27 439 aa17.32■□□□□ 0.36
PCDHA6-202ENST00000527624 ABL2P42684 1182 aa17.32■□□□□ 0.36
PCDHA6-202ENST00000527624 PTDSS1P48651 473 aaKnown RBP17.32■□□□□ 0.36
PCDHA6-202ENST00000527624 IDH3AP50213 366 aa17.32■□□□□ 0.36
PCDHA6-202ENST00000527624 TUBB3Q13509 450 aa17.32■□□□□ 0.36
PCDHA6-202ENST00000527624 RCN2Q14257 317 aa17.32■□□□□ 0.36
PCDHA6-202ENST00000527624 KPNB1Q14974 876 aaKnown RBP17.32■□□□□ 0.36
PCDHA6-202ENST00000527624 TBCCQ15814 346 aa17.32■□□□□ 0.36
PCDHA6-202ENST00000527624 ACSBG2Q5FVE4 666 aa17.32■□□□□ 0.36
PCDHA6-202ENST00000527624 PLPP4Q5VZY2 271 aa17.32■□□□□ 0.36
PCDHA6-202ENST00000527624 MRNIPQ6NTE8 343 aa17.32■□□□□ 0.36
PCDHA6-202ENST00000527624 CCDC149Q6ZUS6 474 aa17.32■□□□□ 0.36
PCDHA6-202ENST00000527624 GALNT7Q86SF2 657 aa17.32■□□□□ 0.36
PCDHA6-202ENST00000527624 ARHGAP24Q8N264 748 aa17.32■□□□□ 0.36
PCDHA6-202ENST00000527624 OR4L1Q8NH43 312 aa17.32■□□□□ 0.36
PCDHA6-202ENST00000527624 CFAP61Q8NHU2 1237 aa17.32■□□□□ 0.36
PCDHA6-202ENST00000527624 ANKRD49Q8WVL7 239 aa17.32■□□□□ 0.36
PCDHA6-202ENST00000527624 PEX13Q92968 403 aa17.32■□□□□ 0.36
PCDHA6-202ENST00000527624 CLP1Q92989 425 aaKnown RBP17.32■□□□□ 0.36
PCDHA6-202ENST00000527624 FAM136AQ96C01 138 aa17.32■□□□□ 0.36
PCDHA6-202ENST00000527624 TSPAN17Q96FV3 270 aa17.32■□□□□ 0.36
PCDHA6-202ENST00000527624 CDKN2AIPNLQ96HQ2 116 aa17.32■□□□□ 0.36
PCDHA6-202ENST00000527624 CATSPERZQ9NTU4 200 aa17.32■□□□□ 0.36
PCDHA6-202ENST00000527624 TAGLN3Q9UI15 199 aa17.32■□□□□ 0.36
PCDHA6-202ENST00000527624 CLEC4EQ9ULY5 219 aa17.32■□□□□ 0.36
PCDHA6-202ENST00000527624 ARIH1Q9Y4X5 557 aaPredicted RBP17.32■□□□□ 0.36
PCDHA6-202ENST00000527624 INSL6Q9Y581 213 aa17.32■□□□□ 0.36
PCDHA6-202ENST00000527624 NEMP2A6NFY4 417 aa17.31■□□□□ 0.36
PCDHA6-202ENST00000527624 ZNF195O14628 629 aa17.31■□□□□ 0.36
PCDHA6-202ENST00000527624 H2AFYO75367 372 aaKnown RBP17.31■□□□□ 0.36
PCDHA6-202ENST00000527624 MPSTP25325 297 aa17.31■□□□□ 0.36
PCDHA6-202ENST00000527624 DNAJB1P25685 340 aa17.31■□□□□ 0.36
PCDHA6-202ENST00000527624 PGM1P36871 562 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms