RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 SLC2A13Q96QE2 648 aa12.56□□□□□ -0.4
CAPN1-208ENST00000527323 SLC9A7Q96T83 725 aa12.56□□□□□ -0.4
CAPN1-208ENST00000527323 OSBPL6Q9BZF3 934 aa12.56□□□□□ -0.4
CAPN1-208ENST00000527323 FBRSL1Q9HCM7 1045 aaKnown RBP12.56□□□□□ -0.4
CAPN1-208ENST00000527323 WDR6Q9NNW5 1121 aaKnown RBP12.56□□□□□ -0.4
CAPN1-208ENST00000527323 TNFRSF12AQ9NP84 129 aa12.56□□□□□ -0.4
CAPN1-208ENST00000527323 EGFL7Q9UHF1 273 aa12.56□□□□□ -0.4
CAPN1-208ENST00000527323 FBXO5Q9UKT4 447 aa12.56□□□□□ -0.4
CAPN1-208ENST00000527323 A0A087X1B8 175 aa12.55□□□□□ -0.4
CAPN1-208ENST00000527323 IPO13O94829 963 aaKnown RBP12.55□□□□□ -0.4
CAPN1-208ENST00000527323 SUPT7LO94864 414 aa12.55□□□□□ -0.4
CAPN1-208ENST00000527323 LRIG2O94898 1065 aa12.55□□□□□ -0.4
CAPN1-208ENST00000527323 FYNP06241 537 aa12.55□□□□□ -0.4
CAPN1-208ENST00000527323 GNAO1P09471 354 aa12.55□□□□□ -0.4
CAPN1-208ENST00000527323 UGT1A6P19224 532 aa12.55□□□□□ -0.4
CAPN1-208ENST00000527323 TPP2P29144 1249 aaPredicted RBP12.55□□□□□ -0.4
CAPN1-208ENST00000527323 PBX3P40426 434 aa12.55□□□□□ -0.4
CAPN1-208ENST00000527323 TUBA4AP68366 448 aa12.55□□□□□ -0.4
CAPN1-208ENST00000527323 SOX4Q06945 474 aaPredicted RBP12.55□□□□□ -0.4
CAPN1-208ENST00000527323 SV2CQ496J9 727 aa12.55□□□□□ -0.4
CAPN1-208ENST00000527323 WSCD1Q658N2 575 aa12.55□□□□□ -0.4
CAPN1-208ENST00000527323 FAM117BQ6P1L5 589 aa12.55□□□□□ -0.4
CAPN1-208ENST00000527323 DUS1LQ6P1R4 473 aaKnown RBP12.55□□□□□ -0.4
CAPN1-208ENST00000527323 CLEC20AQ6ZU45 233 aa12.55□□□□□ -0.4
CAPN1-208ENST00000527323 CROCCP3Q8IVE0 287 aa12.55□□□□□ -0.4
CAPN1-208ENST00000527323 OR2T34Q8NGX1 318 aa12.55□□□□□ -0.4
CAPN1-208ENST00000527323 OR2T3Q8NH03 318 aa12.55□□□□□ -0.4
CAPN1-208ENST00000527323 FAM110BQ8TC76 370 aa12.55□□□□□ -0.4
CAPN1-208ENST00000527323 GAD1Q99259 594 aa12.55□□□□□ -0.4
CAPN1-208ENST00000527323 COLEC11Q9BWP8 271 aa12.55□□□□□ -0.4
CAPN1-208ENST00000527323 FSD1LQ9BXM9 530 aa12.55□□□□□ -0.4
CAPN1-208ENST00000527323 ANKRD60Q9BZ19 345 aa12.55□□□□□ -0.4
CAPN1-208ENST00000527323 MRGBPQ9NV56 204 aa12.55□□□□□ -0.4
CAPN1-208ENST00000527323 IPO11Q9UI26 975 aaKnown RBP12.55□□□□□ -0.4
CAPN1-208ENST00000527323 TRAF6Q9Y4K3 522 aa12.55□□□□□ -0.4
CAPN1-208ENST00000527323 CASTOR2A6NHX0 329 aa12.55□□□□□ -0.4
CAPN1-208ENST00000527323 CITO14578 2027 aa12.55□□□□□ -0.4
CAPN1-208ENST00000527323 ZSCAN9O15535 394 aaPredicted RBP12.55□□□□□ -0.4
CAPN1-208ENST00000527323 MGEA5O60502 916 aa12.55□□□□□ -0.4
CAPN1-208ENST00000527323 CPB1P15086 417 aa12.55□□□□□ -0.4
CAPN1-208ENST00000527323 PAMP19021 973 aa12.55□□□□□ -0.4
CAPN1-208ENST00000527323 IL10P22301 178 aa12.55□□□□□ -0.4
CAPN1-208ENST00000527323 SOX11P35716 441 aa12.55□□□□□ -0.4
CAPN1-208ENST00000527323 NHSL2Q5HYW2 709 aa12.55□□□□□ -0.4
CAPN1-208ENST00000527323 RBM20Q5T481 1227 aaKnown RBP12.55□□□□□ -0.4
CAPN1-208ENST00000527323 AGAP9Q5VTM2 703 aa12.55□□□□□ -0.4
CAPN1-208ENST00000527323 PPP4R4Q6NUP7 873 aa12.55□□□□□ -0.4
CAPN1-208ENST00000527323 ARHGAP36Q6ZRI8 547 aa12.55□□□□□ -0.4
CAPN1-208ENST00000527323 CAMK1DQ8IU85 385 aa12.55□□□□□ -0.4
CAPN1-208ENST00000527323 SPPL2CQ8IUH8 684 aa12.55□□□□□ -0.4
CAPN1-208ENST00000527323 PNPLA1Q8N8W4 532 aa12.55□□□□□ -0.4
CAPN1-208ENST00000527323 PCYOX1LQ8NBM8 494 aa12.55□□□□□ -0.4
CAPN1-208ENST00000527323 EXT2Q93063 718 aa12.55□□□□□ -0.4
CAPN1-208ENST00000527323 HMX1Q9NP08 348 aaPredicted RBP12.55□□□□□ -0.4
CAPN1-208ENST00000527323 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.55□□□□□ -0.4
CAPN1-208ENST00000527323 CD300AQ9UGN4 299 aa12.55□□□□□ -0.4
CAPN1-208ENST00000527323 A8MT66 165 aa12.54□□□□□ -0.4
CAPN1-208ENST00000527323 HAS3O00219 553 aa12.54□□□□□ -0.4
CAPN1-208ENST00000527323 NR5A2O00482 541 aa12.54□□□□□ -0.4
CAPN1-208ENST00000527323 AURKAO14965 403 aa12.54□□□□□ -0.4
CAPN1-208ENST00000527323 XPOTO43592 962 aaKnown RBP12.54□□□□□ -0.4
CAPN1-208ENST00000527323 BMP10O95393 424 aa12.54□□□□□ -0.4
CAPN1-208ENST00000527323 PNPLA4P41247 253 aa12.54□□□□□ -0.4
CAPN1-208ENST00000527323 PSMD8P48556 350 aa12.54□□□□□ -0.4
CAPN1-208ENST00000527323 CSRP3P50461 194 aa12.54□□□□□ -0.4
CAPN1-208ENST00000527323 DNAJB13P59910 316 aa12.54□□□□□ -0.4
CAPN1-208ENST00000527323 INTS6LQ5JSJ4 861 aaKnown RBP12.54□□□□□ -0.4
CAPN1-208ENST00000527323 NEPROQ6NW34 567 aa12.54□□□□□ -0.4
CAPN1-208ENST00000527323 STON2Q8WXE9 905 aa12.54□□□□□ -0.4
CAPN1-208ENST00000527323 TFAP2CQ92754 450 aa12.54□□□□□ -0.4
CAPN1-208ENST00000527323 NTAN1Q96AB6 310 aa12.54□□□□□ -0.4
CAPN1-208ENST00000527323 C12orf43Q96C57 262 aaKnown RBP12.54□□□□□ -0.4
CAPN1-208ENST00000527323 BIRC8Q96P09 236 aa12.54□□□□□ -0.4
CAPN1-208ENST00000527323 PAIP1Q9H074 479 aaKnown RBP12.54□□□□□ -0.4
CAPN1-208ENST00000527323 MEAF6Q9HAF1 191 aa12.54□□□□□ -0.4
CAPN1-208ENST00000527323 VPS45Q9NRW7 570 aa12.54□□□□□ -0.4
CAPN1-208ENST00000527323 DUS2Q9NX74 493 aaKnown RBP12.54□□□□□ -0.4
CAPN1-208ENST00000527323 MTF2Q9Y483 593 aaPredicted RBP12.54□□□□□ -0.4
CAPN1-208ENST00000527323 C9JVG2 144 aa12.54□□□□□ -0.4
CAPN1-208ENST00000527323 DNAJB2P25686 324 aa12.54□□□□□ -0.4
CAPN1-208ENST00000527323 HCAR3P49019 387 aa12.54□□□□□ -0.4
CAPN1-208ENST00000527323 ADAM17P78536 824 aa12.54□□□□□ -0.4
CAPN1-208ENST00000527323 POU4F1Q01851 419 aa12.54□□□□□ -0.4
CAPN1-208ENST00000527323 PCSK7Q16549 785 aa12.54□□□□□ -0.4
CAPN1-208ENST00000527323 C6orf10Q5SRN2 563 aa12.54□□□□□ -0.4
CAPN1-208ENST00000527323 BTBD8Q5XKL5 378 aa12.54□□□□□ -0.4
CAPN1-208ENST00000527323 PAQR9Q6ZVX9 377 aa12.54□□□□□ -0.4
CAPN1-208ENST00000527323 RBM12BQ8IXT5 1001 aaKnown RBP12.54□□□□□ -0.4
CAPN1-208ENST00000527323 TRPC4APQ8TEL6 797 aa12.54□□□□□ -0.4
CAPN1-208ENST00000527323 ISOC1Q96CN7 298 aa12.54□□□□□ -0.4
CAPN1-208ENST00000527323 CCDC126Q96EE4 140 aa12.54□□□□□ -0.4
CAPN1-208ENST00000527323 STARD7Q9NQZ5 370 aa12.54□□□□□ -0.4
CAPN1-208ENST00000527323 MIOSQ9NXC5 875 aa12.54□□□□□ -0.4
CAPN1-208ENST00000527323 GDAP2Q9NXN4 497 aa12.54□□□□□ -0.4
CAPN1-208ENST00000527323 TMEM181Q9P2C4 612 aa12.54□□□□□ -0.4
CAPN1-208ENST00000527323 CDC14AQ9UNH5 594 aa12.54□□□□□ -0.4
CAPN1-208ENST00000527323 RRN3P2A6NIE6 340 aa12.53□□□□□ -0.4
CAPN1-208ENST00000527323 SUPT3HO75486 399 aa12.53□□□□□ -0.4
CAPN1-208ENST00000527323 ANXA9O76027 345 aa12.53□□□□□ -0.4
CAPN1-208ENST00000527323 CLIC3O95833 236 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms