RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 RPIAP49247 311 aa18.61■□□□□ 0.57
CAPN1-203ENST00000525013 SRP54P61011 504 aaKnown RBP18.61■□□□□ 0.57
CAPN1-203ENST00000525013 ELOCQ15369 112 aa18.61■□□□□ 0.57
CAPN1-203ENST00000525013 NR0B2Q15466 257 aa18.61■□□□□ 0.57
CAPN1-203ENST00000525013 IFI16Q16666 785 aaKnown RBP18.61■□□□□ 0.57
CAPN1-203ENST00000525013 ARMC12Q5T9G4 340 aa18.61■□□□□ 0.57
CAPN1-203ENST00000525013 TIGD7Q6NT04 549 aaPredicted RBP18.61■□□□□ 0.57
CAPN1-203ENST00000525013 EFL1Q7Z2Z2 1120 aaKnown RBP18.61■□□□□ 0.57
CAPN1-203ENST00000525013 CNGA4Q8IV77 575 aa18.61■□□□□ 0.57
CAPN1-203ENST00000525013 FSTL5Q8N475 847 aaPredicted RBP18.61■□□□□ 0.57
CAPN1-203ENST00000525013 TEX26Q8N6G2 289 aa18.61■□□□□ 0.57
CAPN1-203ENST00000525013 DCBLD1Q8N8Z6 715 aa18.61■□□□□ 0.57
CAPN1-203ENST00000525013 MAPK15Q8TD08 544 aa18.61■□□□□ 0.57
CAPN1-203ENST00000525013 SCG3Q8WXD2 468 aaKnown RBP18.61■□□□□ 0.57
CAPN1-203ENST00000525013 TBATAQ96M53 351 aa18.61■□□□□ 0.57
CAPN1-203ENST00000525013 TRIM5Q9C035 493 aa18.61■□□□□ 0.57
CAPN1-203ENST00000525013 LRRD1A4D1F6 860 aa18.6■□□□□ 0.57
CAPN1-203ENST00000525013 PGLSO95336 258 aa18.6■□□□□ 0.57
CAPN1-203ENST00000525013 CELA2BP08218 269 aaPredicted RBP18.6■□□□□ 0.57
CAPN1-203ENST00000525013 ALPIP09923 528 aa18.6■□□□□ 0.57
CAPN1-203ENST00000525013 CYP2A6P11509 494 aaPredicted RBP18.6■□□□□ 0.57
CAPN1-203ENST00000525013 GBE1Q04446 702 aa18.6■□□□□ 0.57
CAPN1-203ENST00000525013 CNGA3Q16281 694 aa18.6■□□□□ 0.57
CAPN1-203ENST00000525013 C6orf132Q5T0Z8 1188 aa18.6■□□□□ 0.57
CAPN1-203ENST00000525013 GUSBP11Q6P575 273 aa18.6■□□□□ 0.57
CAPN1-203ENST00000525013 C19orf48Q6RUI8 117 aa18.6■□□□□ 0.57
CAPN1-203ENST00000525013 NYAP1Q6ZVC0 841 aa18.6■□□□□ 0.57
CAPN1-203ENST00000525013 CACTIN-AS1Q8N1I8 211 aa18.6■□□□□ 0.57
CAPN1-203ENST00000525013 PQLC3Q8N755 202 aa18.6■□□□□ 0.57
CAPN1-203ENST00000525013 LRRN4Q8WUT4 740 aa18.6■□□□□ 0.57
CAPN1-203ENST00000525013 SPOCK2Q92563 424 aa18.6■□□□□ 0.57
CAPN1-203ENST00000525013 RAPGEF5Q92565 580 aa18.6■□□□□ 0.57
CAPN1-203ENST00000525013 BOCQ9BWV1 1114 aa18.6■□□□□ 0.57
CAPN1-203ENST00000525013 POLR1EQ9GZS1 481 aaKnown RBP18.6■□□□□ 0.57
CAPN1-203ENST00000525013 HAUS2Q9NVX0 235 aa18.6■□□□□ 0.57
CAPN1-203ENST00000525013 RBM22Q9NW64 420 aaKnown RBP eCLIP18.6■□□□□ 0.57
CAPN1-203ENST00000525013 GULP1Q9UBP9 304 aa18.6■□□□□ 0.57
CAPN1-203ENST00000525013 RAI2Q9Y5P3 530 aa18.6■□□□□ 0.57
CAPN1-203ENST00000525013 ARHGEF17Q96PE2 2063 aaPredicted RBP18.6■□□□□ 0.57
CAPN1-203ENST00000525013 ADAMTS20P59510 1910 aa18.6■□□□□ 0.57
CAPN1-203ENST00000525013 NBEAQ8NFP9 2946 aa18.59■□□□□ 0.57
CAPN1-203ENST00000525013 MATN3O15232 486 aa18.59■□□□□ 0.57
CAPN1-203ENST00000525013 HEXIM1O94992 359 aaKnown RBP18.59■□□□□ 0.57
CAPN1-203ENST00000525013 TNFP01375 233 aa18.59■□□□□ 0.57
CAPN1-203ENST00000525013 KRT10P13645 584 aa18.59■□□□□ 0.57
CAPN1-203ENST00000525013 CTPS1P17812 591 aa18.59■□□□□ 0.57
CAPN1-203ENST00000525013 GM2AP17900 193 aa18.59■□□□□ 0.57
CAPN1-203ENST00000525013 MX2P20592 715 aa18.59■□□□□ 0.57
CAPN1-203ENST00000525013 KDELR1P24390 212 aa18.59■□□□□ 0.57
CAPN1-203ENST00000525013 CCNCP24863 283 aa18.59■□□□□ 0.57
CAPN1-203ENST00000525013 ARHGAP25P42331 645 aa18.59■□□□□ 0.57
CAPN1-203ENST00000525013 ARHGEF7Q14155 803 aa18.59■□□□□ 0.57
CAPN1-203ENST00000525013 ESRP1Q6NXG1 681 aaKnown RBP18.59■□□□□ 0.57
CAPN1-203ENST00000525013 RHOT2Q8IXI1 618 aa18.59■□□□□ 0.57
CAPN1-203ENST00000525013 SLC35F3Q8IY50 421 aa18.59■□□□□ 0.57
CAPN1-203ENST00000525013 CCNYQ8ND76 341 aa18.59■□□□□ 0.57
CAPN1-203ENST00000525013 FUBP1Q96AE4 644 aaKnown RBP18.59■□□□□ 0.57
CAPN1-203ENST00000525013 FAF2Q96CS3 445 aa18.59■□□□□ 0.57
CAPN1-203ENST00000525013 NUS1Q96E22 293 aa18.59■□□□□ 0.57
CAPN1-203ENST00000525013 COQ10AQ96MF6 247 aa18.59■□□□□ 0.57
CAPN1-203ENST00000525013 ZNF830Q96NB3 372 aaPredicted RBP18.59■□□□□ 0.57
CAPN1-203ENST00000525013 TSGA13Q96PP4 275 aa18.59■□□□□ 0.57
CAPN1-203ENST00000525013 DEPDC7Q96QD5 511 aa18.59■□□□□ 0.57
CAPN1-203ENST00000525013 ANP32EQ9BTT0 268 aa18.59■□□□□ 0.57
CAPN1-203ENST00000525013 NRSN2Q9GZP1 204 aa18.59■□□□□ 0.57
CAPN1-203ENST00000525013 WDR26Q9H7D7 661 aa18.59■□□□□ 0.57
CAPN1-203ENST00000525013 SIRPGQ9P1W8 387 aa18.59■□□□□ 0.57
CAPN1-203ENST00000525013 MOSPD1Q9UJG1 213 aa18.59■□□□□ 0.57
CAPN1-203ENST00000525013 ITPR1Q14643 2758 aa18.59■□□□□ 0.57
CAPN1-203ENST00000525013 UNC13CQ8NB66 2214 aa18.58■□□□□ 0.57
CAPN1-203ENST00000525013 GOLGA6CA6NDK9 693 aa18.58■□□□□ 0.56
CAPN1-203ENST00000525013 GOLGA6BA6NDN3 693 aa18.58■□□□□ 0.56
CAPN1-203ENST00000525013 TMEM202A6NGA9 273 aa18.58■□□□□ 0.56
CAPN1-203ENST00000525013 NPIPB15A6NHN6 443 aaPredicted RBP18.58■□□□□ 0.56
CAPN1-203ENST00000525013 GOLGA6DP0CG33 693 aa18.58■□□□□ 0.56
CAPN1-203ENST00000525013 TNNT1P13805 278 aa18.58■□□□□ 0.56
CAPN1-203ENST00000525013 CCNB1P14635 433 aa18.58■□□□□ 0.56
CAPN1-203ENST00000525013 KELP23276 732 aa18.58■□□□□ 0.56
CAPN1-203ENST00000525013 KIAA1024LP59773 190 aa18.58■□□□□ 0.56
CAPN1-203ENST00000525013 DSC2Q02487 901 aa18.58■□□□□ 0.56
CAPN1-203ENST00000525013 PTPRRQ15256 657 aa18.58■□□□□ 0.56
CAPN1-203ENST00000525013 ODF2Q5BJF6 829 aa18.58■□□□□ 0.56
CAPN1-203ENST00000525013 PNCKQ6P2M8 343 aa18.58■□□□□ 0.56
CAPN1-203ENST00000525013 CRTC1Q6UUV9 634 aa18.58■□□□□ 0.56
CAPN1-203ENST00000525013 USP45Q70EL2 814 aa18.58■□□□□ 0.56
CAPN1-203ENST00000525013 GKN2Q86XP6 184 aa18.58■□□□□ 0.56
CAPN1-203ENST00000525013 NDUFAF2Q8N183 169 aa18.58■□□□□ 0.56
CAPN1-203ENST00000525013 OR56A4Q8NGH8 313 aa18.58■□□□□ 0.56
CAPN1-203ENST00000525013 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.58■□□□□ 0.56
CAPN1-203ENST00000525013 OR1E3Q8WZA6 343 aa18.58■□□□□ 0.56
CAPN1-203ENST00000525013 MAML1Q92585 1016 aa18.58■□□□□ 0.56
CAPN1-203ENST00000525013 SCRN2Q96FV2 425 aa18.58■□□□□ 0.56
CAPN1-203ENST00000525013 PDXPQ96GD0 296 aa18.58■□□□□ 0.56
CAPN1-203ENST00000525013 RNF157Q96PX1 679 aa18.58■□□□□ 0.56
CAPN1-203ENST00000525013 MAK16Q9BXY0 300 aaKnown RBP18.58■□□□□ 0.56
CAPN1-203ENST00000525013 GOLGA6AQ9NYA3 693 aa18.58■□□□□ 0.56
CAPN1-203ENST00000525013 PADI4Q9UM07 663 aa18.58■□□□□ 0.56
CAPN1-203ENST00000525013 KIF26BQ2KJY2 2108 aa18.58■□□□□ 0.56
CAPN1-203ENST00000525013 CELSR3Q9NYQ7 3312 aa18.57■□□□□ 0.56
CAPN1-203ENST00000525013 EME2A4GXA9 379 aaPredicted RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms