RNA–Protein interactions for RNA: ENST00000522115.6

PTPN12-215, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 5

Gene PTPN12, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-215	ENST00000522115	ABCD3	P28288	659 aa		4.27	□□□□□ -1.73
PTPN12-215	ENST00000522115	STX2	P32856	288 aa		4.27	□□□□□ -1.73
PTPN12-215	ENST00000522115	CPOX	P36551	454 aa		4.27	□□□□□ -1.73
PTPN12-215	ENST00000522115	PAFAH1B1	P43034	410 aa		4.27	□□□□□ -1.73
PTPN12-215	ENST00000522115	ZNF155	Q12901	538 aa	Predicted RBP	4.27	□□□□□ -1.73
PTPN12-215	ENST00000522115	PPP2R5B	Q15173	497 aa		4.27	□□□□□ -1.73
PTPN12-215	ENST00000522115	ARMC8	Q8IUR7	673 aa		4.27	□□□□□ -1.73
PTPN12-215	ENST00000522115	NAGS	Q8N159	534 aa		4.27	□□□□□ -1.73
PTPN12-215	ENST00000522115	CREB3L4	Q8TEY5	395 aa		4.27	□□□□□ -1.73
PTPN12-215	ENST00000522115	SLC41A2	Q96JW4	573 aa		4.27	□□□□□ -1.73
PTPN12-215	ENST00000522115	ZNF570	Q96NI8	536 aa		4.27	□□□□□ -1.73
PTPN12-215	ENST00000522115	PKP4	Q99569	1192 aa		4.27	□□□□□ -1.73
PTPN12-215	ENST00000522115	SPRY4	Q9C004	299 aa		4.27	□□□□□ -1.73
PTPN12-215	ENST00000522115	MYH16	Q9H6N6	1097 aa		4.27	□□□□□ -1.73
PTPN12-215	ENST00000522115	EBF2	Q9HAK2	575 aa		4.27	□□□□□ -1.73
PTPN12-215	ENST00000522115	CTNNAL1	Q9UBT7	734 aa		4.27	□□□□□ -1.73
PTPN12-215	ENST00000522115	ZNF112	Q9UJU3	913 aa		4.27	□□□□□ -1.73
PTPN12-215	ENST00000522115	CRYL1	Q9Y2S2	319 aa		4.27	□□□□□ -1.73
PTPN12-215	ENST00000522115	TMEM98	Q9Y2Y6	226 aa		4.27	□□□□□ -1.73
PTPN12-215	ENST00000522115	USP17L23	D6RBM5	183 aa		4.26	□□□□□ -1.73
PTPN12-215	ENST00000522115	KRT86	O43790	486 aa		4.26	□□□□□ -1.73
PTPN12-215	ENST00000522115	LDB3	O75112	727 aa		4.26	□□□□□ -1.73
PTPN12-215	ENST00000522115	TIPRL	O75663	272 aa		4.26	□□□□□ -1.73
PTPN12-215	ENST00000522115	LINC00271	P0C7V0	271 aa		4.26	□□□□□ -1.73
PTPN12-215	ENST00000522115	CDA	P32320	146 aa		4.26	□□□□□ -1.73
PTPN12-215	ENST00000522115	TUB	P50607	506 aa		4.26	□□□□□ -1.73
PTPN12-215	ENST00000522115	EIF3B	P55884	814 aa	Known RBP	4.26	□□□□□ -1.73
PTPN12-215	ENST00000522115	BRWD1-AS2	P59051	145 aa		4.26	□□□□□ -1.73
PTPN12-215	ENST00000522115	SEC61B	P60468	96 aa	Known RBP	4.26	□□□□□ -1.73
PTPN12-215	ENST00000522115	DDR1	Q08345	913 aa		4.26	□□□□□ -1.73
PTPN12-215	ENST00000522115	TNFAIP1	Q13829	316 aa		4.26	□□□□□ -1.73
PTPN12-215	ENST00000522115	KRT81	Q14533	505 aa		4.26	□□□□□ -1.73
PTPN12-215	ENST00000522115	ZRSR1	Q15695	479 aa	Known RBP	4.26	□□□□□ -1.73
PTPN12-215	ENST00000522115	MMEL1	Q495T6	779 aa		4.26	□□□□□ -1.73
PTPN12-215	ENST00000522115	C9orf50	Q5SZB4	431 aa		4.26	□□□□□ -1.73
PTPN12-215	ENST00000522115	METTL2B	Q6P1Q9	378 aa	Known RBP	4.26	□□□□□ -1.73
PTPN12-215	ENST00000522115	B3GNT6	Q6ZMB0	384 aa		4.26	□□□□□ -1.73
PTPN12-215	ENST00000522115	SLC46A3	Q7Z3Q1	461 aa		4.26	□□□□□ -1.73
PTPN12-215	ENST00000522115	CUZD1	Q86UP6	607 aa		4.26	□□□□□ -1.73
PTPN12-215	ENST00000522115	FOXRED2	Q8IWF2	684 aa		4.26	□□□□□ -1.73
PTPN12-215	ENST00000522115	WDR63	Q8IWG1	891 aa		4.26	□□□□□ -1.73
PTPN12-215	ENST00000522115	CHERP	Q8IWX8	916 aa	Known RBP	4.26	□□□□□ -1.73
PTPN12-215	ENST00000522115	ZCCHC9	Q8N567	271 aa	Known RBP	4.26	□□□□□ -1.73
PTPN12-215	ENST00000522115	HUS1B	Q8NHY5	278 aa		4.26	□□□□□ -1.73
PTPN12-215	ENST00000522115	SAAL1	Q96ER3	474 aa		4.26	□□□□□ -1.73
PTPN12-215	ENST00000522115	METTL2A	Q96IZ6	378 aa	Known RBP	4.26	□□□□□ -1.73
PTPN12-215	ENST00000522115	IL17F	Q96PD4	163 aa		4.26	□□□□□ -1.73
PTPN12-215	ENST00000522115	MPHOSPH8	Q99549	860 aa		4.26	□□□□□ -1.73
PTPN12-215	ENST00000522115	PAIP1	Q9H074	479 aa	Known RBP	4.26	□□□□□ -1.73
PTPN12-215	ENST00000522115	JMJD4	Q9H9V9	463 aa		4.26	□□□□□ -1.73
PTPN12-215	ENST00000522115	NOX4	Q9NPH5	578 aa		4.26	□□□□□ -1.73
PTPN12-215	ENST00000522115	MCM9	Q9NXL9	1143 aa		4.26	□□□□□ -1.73
PTPN12-215	ENST00000522115	C1RL	Q9NZP8	487 aa		4.26	□□□□□ -1.73
PTPN12-215	ENST00000522115	SIX4	Q9UIU6	781 aa		4.26	□□□□□ -1.73
PTPN12-215	ENST00000522115	FBXO9	Q9UK97	447 aa	Predicted RBP	4.26	□□□□□ -1.73
PTPN12-215	ENST00000522115	TULP2	O00295	520 aa		4.25	□□□□□ -1.73
PTPN12-215	ENST00000522115	KDM4B	O94953	1096 aa		4.25	□□□□□ -1.73
PTPN12-215	ENST00000522115	CLDN14	O95500	239 aa		4.25	□□□□□ -1.73
PTPN12-215	ENST00000522115	EPHA8	P29322	1005 aa	Predicted RBP	4.25	□□□□□ -1.73
PTPN12-215	ENST00000522115	METAP2	P50579	478 aa	Known RBP eCLIP	4.25	□□□□□ -1.73
PTPN12-215	ENST00000522115	GSTA3	Q16772	222 aa		4.25	□□□□□ -1.73
PTPN12-215	ENST00000522115	USP41	Q3LFD5	358 aa		4.25	□□□□□ -1.73
PTPN12-215	ENST00000522115	ZNF672	Q499Z4	452 aa	Predicted RBP	4.25	□□□□□ -1.73
PTPN12-215	ENST00000522115	INTS11	Q5TA45	600 aa	Known RBP	4.25	□□□□□ -1.73
PTPN12-215	ENST00000522115	LCTL	Q6UWM7	567 aa		4.25	□□□□□ -1.73
PTPN12-215	ENST00000522115	ZBTB2	Q8N680	514 aa		4.25	□□□□□ -1.73
PTPN12-215	ENST00000522115	SPATA22	Q8NHS9	363 aa		4.25	□□□□□ -1.73
PTPN12-215	ENST00000522115	TANK	Q92844	425 aa		4.25	□□□□□ -1.73
PTPN12-215	ENST00000522115	KIF1BP	Q96EK5	621 aa		4.25	□□□□□ -1.73
PTPN12-215	ENST00000522115	KCNN2	Q9H2S1	579 aa		4.25	□□□□□ -1.73
PTPN12-215	ENST00000522115	PRKRIP1	Q9H875	184 aa	Predicted RBP	4.25	□□□□□ -1.73
PTPN12-215	ENST00000522115	UBTD1	Q9HAC8	227 aa		4.25	□□□□□ -1.73
PTPN12-215	ENST00000522115	UBN1	Q9NPG3	1134 aa		4.25	□□□□□ -1.73
PTPN12-215	ENST00000522115	CNGB3	Q9NQW8	809 aa		4.25	□□□□□ -1.73
PTPN12-215	ENST00000522115	PLSCR4	Q9NRQ2	329 aa		4.25	□□□□□ -1.73
PTPN12-215	ENST00000522115	TINAG	Q9UJW2	476 aa		4.25	□□□□□ -1.73
PTPN12-215	ENST00000522115	SNX9	Q9Y5X1	595 aa		4.25	□□□□□ -1.73
PTPN12-215	ENST00000522115	IGHV4OR15-8	A0A075B7B6	117 aa		4.24	□□□□□ -1.73
PTPN12-215	ENST00000522115	IFITM10	A6NMD0	228 aa		4.24	□□□□□ -1.73
PTPN12-215	ENST00000522115	SOCS6	O14544	535 aa		4.24	□□□□□ -1.73
PTPN12-215	ENST00000522115	GNAQ	P50148	359 aa		4.24	□□□□□ -1.73
PTPN12-215	ENST00000522115	DLX5	P56178	289 aa		4.24	□□□□□ -1.73
PTPN12-215	ENST00000522115	C2orf68	Q2NKX9	166 aa		4.24	□□□□□ -1.73
PTPN12-215	ENST00000522115	ZNF718	Q3SXZ3	478 aa		4.24	□□□□□ -1.73
PTPN12-215	ENST00000522115	C6orf141	Q5SZD1	244 aa		4.24	□□□□□ -1.73
PTPN12-215	ENST00000522115	FAM69A	Q5T7M9	428 aa		4.24	□□□□□ -1.73
PTPN12-215	ENST00000522115	ACAD10	Q6JQN1	1059 aa		4.24	□□□□□ -1.73
PTPN12-215	ENST00000522115	FBXO46	Q6PJ61	603 aa	Predicted RBP	4.24	□□□□□ -1.73
PTPN12-215	ENST00000522115	CCNI2	Q6ZMN8	369 aa	Predicted RBP	4.24	□□□□□ -1.73
PTPN12-215	ENST00000522115	KRBA2	Q6ZNG9	492 aa		4.24	□□□□□ -1.73
PTPN12-215	ENST00000522115	QSOX2	Q6ZRP7	698 aa		4.24	□□□□□ -1.73
PTPN12-215	ENST00000522115	TAOK1	Q7L7X3	1001 aa		4.24	□□□□□ -1.73
PTPN12-215	ENST00000522115	EXOC3L1	Q86VI1	746 aa		4.24	□□□□□ -1.73
PTPN12-215	ENST00000522115	TDRP	Q86YL5	185 aa		4.24	□□□□□ -1.73
PTPN12-215	ENST00000522115	CADM4	Q8NFZ8	388 aa		4.24	□□□□□ -1.73
PTPN12-215	ENST00000522115	LNX1	Q8TBB1	728 aa	Predicted RBP	4.24	□□□□□ -1.73
PTPN12-215	ENST00000522115	NEK9	Q8TD19	979 aa		4.24	□□□□□ -1.73
PTPN12-215	ENST00000522115	SORCS1	Q8WY21	1168 aa		4.24	□□□□□ -1.73
PTPN12-215	ENST00000522115	TKTL2	Q9H0I9	626 aa		4.24	□□□□□ -1.73
PTPN12-215	ENST00000522115	RETREG1	Q9H6L5	497 aa		4.24	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms