RNA–Protein interactions for RNA: ENST00000522111.2

TRNP1-201, Transcript of TMF1-regulated nuclear protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRNP1, Length 1,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1-201ENST00000522111 ZNF711Q9Y462 761 aa27.3■■□□□ 1.96
TRNP1-201ENST00000522111 GRXCR2A6NFK2 248 aa27.29■■□□□ 1.96
TRNP1-201ENST00000522111 TPP1O14773 563 aa27.29■■□□□ 1.96
TRNP1-201ENST00000522111 RPP40O75818 363 aaKnown RBP27.29■■□□□ 1.96
TRNP1-201ENST00000522111 GOT2P00505 430 aaKnown RBP27.29■■□□□ 1.96
TRNP1-201ENST00000522111 AHSGP02765 367 aa27.29■■□□□ 1.96
TRNP1-201ENST00000522111 ALDOAP04075 364 aaKnown RBP27.29■■□□□ 1.96
TRNP1-201ENST00000522111 HLA-EP13747 358 aa27.29■■□□□ 1.96
TRNP1-201ENST00000522111 GABRB3P28472 473 aa27.29■■□□□ 1.96
TRNP1-201ENST00000522111 SPRP35270 261 aaPredicted RBP27.29■■□□□ 1.96
TRNP1-201ENST00000522111 LIMK2P53671 638 aa27.29■■□□□ 1.96
TRNP1-201ENST00000522111 ACVR1Q04771 509 aa27.29■■□□□ 1.96
TRNP1-201ENST00000522111 HTR4Q13639 388 aa27.29■■□□□ 1.96
TRNP1-201ENST00000522111 ITPRIPL2Q3MIP1 535 aa27.29■■□□□ 1.96
TRNP1-201ENST00000522111 PHTF2Q8N3S3 785 aa27.29■■□□□ 1.96
TRNP1-201ENST00000522111 CPEB1Q9BZB8 566 aaKnown RBP27.29■■□□□ 1.96
TRNP1-201ENST00000522111 C12orf65Q9H3J6 166 aaKnown RBP27.29■■□□□ 1.96
TRNP1-201ENST00000522111 PCMTD2Q9NV79 361 aa27.29■■□□□ 1.96
TRNP1-201ENST00000522111 NSMCE4AQ9NXX6 385 aa27.29■■□□□ 1.96
TRNP1-201ENST00000522111 MARCH4Q9P2E8 410 aaPredicted RBP27.29■■□□□ 1.96
TRNP1-201ENST00000522111 TICRRQ7Z2Z1 1910 aa27.29■■□□□ 1.96
TRNP1-201ENST00000522111 A0A0J9YYE9 177 aa27.29■■□□□ 1.96
TRNP1-201ENST00000522111 CCDC162PA2VCL2 907 aa27.29■■□□□ 1.96
TRNP1-201ENST00000522111 ARNTLO00327 626 aa27.29■■□□□ 1.96
TRNP1-201ENST00000522111 SLC7A4O43246 635 aa27.29■■□□□ 1.96
TRNP1-201ENST00000522111 TYROBPO43914 113 aa27.29■■□□□ 1.96
TRNP1-201ENST00000522111 TRBC1P01850 177 aa27.29■■□□□ 1.96
TRNP1-201ENST00000522111 SKIV2LQ15477 1246 aaKnown RBP27.29■■□□□ 1.96
TRNP1-201ENST00000522111 DCLK2Q8N568 766 aa27.29■■□□□ 1.96
TRNP1-201ENST00000522111 BANPQ8N9N5 519 aa27.29■■□□□ 1.96
TRNP1-201ENST00000522111 ACVR1CQ8NER5 493 aa27.29■■□□□ 1.96
TRNP1-201ENST00000522111 VPS39Q96JC1 886 aa27.29■■□□□ 1.96
TRNP1-201ENST00000522111 GPR63Q9BZJ6 419 aa27.29■■□□□ 1.96
TRNP1-201ENST00000522111 MFSD1Q9H3U5 465 aa27.29■■□□□ 1.96
TRNP1-201ENST00000522111 FBXO6Q9NRD1 293 aaPredicted RBP27.29■■□□□ 1.96
TRNP1-201ENST00000522111 NLE1Q9NVX2 485 aaPredicted RBP27.29■■□□□ 1.96
TRNP1-201ENST00000522111 NKIRAS1Q9NYS0 192 aa27.29■■□□□ 1.96
TRNP1-201ENST00000522111 EPS15L1Q9UBC2 864 aa27.29■■□□□ 1.96
TRNP1-201ENST00000522111 SMG5Q9UPR3 1016 aaKnown RBP27.29■■□□□ 1.96
TRNP1-201ENST00000522111 MTO1Q9Y2Z2 717 aaKnown RBP27.29■■□□□ 1.96
TRNP1-201ENST00000522111 LPOP22079 712 aaPredicted RBP27.28■■□□□ 1.96
TRNP1-201ENST00000522111 HNF1BP35680 557 aa27.28■■□□□ 1.96
TRNP1-201ENST00000522111 RPL26P61254 145 aaKnown RBP27.28■■□□□ 1.96
TRNP1-201ENST00000522111 SH2D5Q6ZV89 423 aa27.28■■□□□ 1.96
TRNP1-201ENST00000522111 TAX1BP1Q86VP1 789 aa27.28■■□□□ 1.96
TRNP1-201ENST00000522111 GDAP1Q8TB36 358 aa27.28■■□□□ 1.96
TRNP1-201ENST00000522111 PEX13Q92968 403 aa27.28■■□□□ 1.96
TRNP1-201ENST00000522111 KLHL32Q96NJ5 620 aa27.28■■□□□ 1.96
TRNP1-201ENST00000522111 SLC13A1Q9BZW2 595 aa27.28■■□□□ 1.96
TRNP1-201ENST00000522111 CAB39LQ9H9S4 337 aa27.28■■□□□ 1.96
TRNP1-201ENST00000522111 FBXO5Q9UKT4 447 aa27.28■■□□□ 1.96
TRNP1-201ENST00000522111 RPL26L1Q9UNX3 145 aaKnown RBP27.28■■□□□ 1.96
TRNP1-201ENST00000522111 PRPF4O43172 522 aaKnown RBP eCLIP27.28■■□□□ 1.96
TRNP1-201ENST00000522111 LEFTY1O75610 366 aa27.28■■□□□ 1.96
TRNP1-201ENST00000522111 PRSS56P0CW18 603 aa27.28■■□□□ 1.96
TRNP1-201ENST00000522111 POM121L1PQ3SYA9 428 aa27.28■■□□□ 1.96
TRNP1-201ENST00000522111 GDPD4Q6W3E5 623 aa27.28■■□□□ 1.96
TRNP1-201ENST00000522111 CMC1Q7Z7K0 106 aa27.28■■□□□ 1.96
TRNP1-201ENST00000522111 TTC30BQ8N4P2 665 aa27.28■■□□□ 1.96
TRNP1-201ENST00000522111 C2CD4AQ8NCU7 369 aaPredicted RBP27.28■■□□□ 1.96
TRNP1-201ENST00000522111 PPM1EQ8WY54 764 aa27.28■■□□□ 1.96
TRNP1-201ENST00000522111 ERLEC1Q96DZ1 483 aa27.28■■□□□ 1.96
TRNP1-201ENST00000522111 CDKN2AIPNLQ96HQ2 116 aa27.28■■□□□ 1.96
TRNP1-201ENST00000522111 HEPHQ9BQS7 1158 aa27.28■■□□□ 1.96
TRNP1-201ENST00000522111 MAGEE1Q9HCI5 957 aa27.28■■□□□ 1.96
TRNP1-201ENST00000522111 WASF2Q9Y6W5 498 aa27.28■■□□□ 1.96
TRNP1-201ENST00000522111 C1orf232A0A0U1RR37 186 aa27.27■■□□□ 1.96
TRNP1-201ENST00000522111 STX7O15400 261 aaKnown RBP27.27■■□□□ 1.96
TRNP1-201ENST00000522111 KAT7O95251 611 aa27.27■■□□□ 1.96
TRNP1-201ENST00000522111 CTSLP07711 333 aa27.27■■□□□ 1.96
TRNP1-201ENST00000522111 SAT1P21673 171 aa27.27■■□□□ 1.96
TRNP1-201ENST00000522111 CSE1LP55060 971 aaKnown RBP27.27■■□□□ 1.96
TRNP1-201ENST00000522111 EIF4HQ15056 248 aaKnown RBP27.27■■□□□ 1.96
TRNP1-201ENST00000522111 TERF2Q15554 542 aa27.27■■□□□ 1.96
TRNP1-201ENST00000522111 AAK1Q2M2I8 961 aa27.27■■□□□ 1.96
TRNP1-201ENST00000522111 ZNF789Q5FWF6 425 aa27.27■■□□□ 1.96
TRNP1-201ENST00000522111 ARSIQ5FYB1 569 aa27.27■■□□□ 1.96
TRNP1-201ENST00000522111 ZC3HC1Q86WB0 502 aaKnown RBP27.27■■□□□ 1.96
TRNP1-201ENST00000522111 CALML6Q8TD86 181 aa27.27■■□□□ 1.96
TRNP1-201ENST00000522111 EID2BQ96D98 161 aa27.27■■□□□ 1.96
TRNP1-201ENST00000522111 ECHDC3Q96DC8 303 aa27.27■■□□□ 1.96
TRNP1-201ENST00000522111 PAIP2Q9BPZ3 127 aaKnown RBP27.27■■□□□ 1.96
TRNP1-201ENST00000522111 MCMBPQ9BTE3 642 aa27.27■■□□□ 1.96
TRNP1-201ENST00000522111 HACD3Q9P035 362 aa27.27■■□□□ 1.96
TRNP1-201ENST00000522111 SIN3BO75182 1162 aa27.26■■□□□ 1.95
TRNP1-201ENST00000522111 HAUS5O94927 633 aa27.26■■□□□ 1.95
TRNP1-201ENST00000522111 TOP3BO95985 862 aaKnown RBP27.26■■□□□ 1.95
TRNP1-201ENST00000522111 ZNF234Q14588 700 aa27.26■■□□□ 1.95
TRNP1-201ENST00000522111 GRM3Q14832 879 aa27.26■■□□□ 1.95
TRNP1-201ENST00000522111 CILP2Q8IUL8 1156 aa27.26■■□□□ 1.95
TRNP1-201ENST00000522111 NDUFAF2Q8N183 169 aa27.26■■□□□ 1.95
TRNP1-201ENST00000522111 DYDC1Q8WWB3 177 aa27.26■■□□□ 1.95
TRNP1-201ENST00000522111 ATXN2LQ8WWM7 1075 aaKnown RBP27.26■■□□□ 1.95
TRNP1-201ENST00000522111 APOPT1Q96IL0 206 aa27.26■■□□□ 1.95
TRNP1-201ENST00000522111 ZNF641Q96N77 438 aaPredicted RBP27.26■■□□□ 1.95
TRNP1-201ENST00000522111 FBRSL1Q9HCM7 1045 aaKnown RBP27.26■■□□□ 1.95
TRNP1-201ENST00000522111 FKBPLQ9UIM3 349 aa27.26■■□□□ 1.95
TRNP1-201ENST00000522111 MUC22E2RYF6 1773 aaPredicted RBP27.26■■□□□ 1.95
TRNP1-201ENST00000522111 TCF20Q9UGU0 1960 aaKnown RBP27.26■■□□□ 1.95
TRNP1-201ENST00000522111 CAPN8A6NHC0 703 aa27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms