RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 TRBC1P01850 177 aa11.18□□□□□ -0.62
SCARNA20-201ENST00000516768 ELFN1P0C7U0 828 aa11.18□□□□□ -0.62
SCARNA20-201ENST00000516768 RBP3P10745 1247 aa11.18□□□□□ -0.62
SCARNA20-201ENST00000516768 CYP2A6P11509 494 aaPredicted RBP11.18□□□□□ -0.62
SCARNA20-201ENST00000516768 RBL1P28749 1068 aa11.18□□□□□ -0.62
SCARNA20-201ENST00000516768 VIPR1P32241 457 aa11.18□□□□□ -0.62
SCARNA20-201ENST00000516768 TRIM23P36406 574 aa11.18□□□□□ -0.62
SCARNA20-201ENST00000516768 ATP5OP48047 213 aa11.18□□□□□ -0.62
SCARNA20-201ENST00000516768 CCT8P50990 548 aa11.18□□□□□ -0.62
SCARNA20-201ENST00000516768 EPHB1P54762 984 aa11.18□□□□□ -0.62
SCARNA20-201ENST00000516768 EIF3EP60228 445 aaKnown RBP11.18□□□□□ -0.62
SCARNA20-201ENST00000516768 PTSQ03393 145 aa11.18□□□□□ -0.62
SCARNA20-201ENST00000516768 KLF1Q13351 362 aaPredicted RBP11.18□□□□□ -0.62
SCARNA20-201ENST00000516768 FZD2Q14332 565 aa11.18□□□□□ -0.62
SCARNA20-201ENST00000516768 INPP5AQ14642 412 aa11.18□□□□□ -0.62
SCARNA20-201ENST00000516768 RPS6KA1Q15418 735 aa11.18□□□□□ -0.62
SCARNA20-201ENST00000516768 SLC14A2Q15849 920 aa11.18□□□□□ -0.62
SCARNA20-201ENST00000516768 PPM1JQ5JR12 505 aa11.18□□□□□ -0.62
SCARNA20-201ENST00000516768 CRTC1Q6UUV9 634 aa11.18□□□□□ -0.62
SCARNA20-201ENST00000516768 USP45Q70EL2 814 aa11.18□□□□□ -0.62
SCARNA20-201ENST00000516768 ZNF567Q8N184 647 aa11.18□□□□□ -0.62
SCARNA20-201ENST00000516768 SLC22A18ASQ8N1D0 253 aa11.18□□□□□ -0.62
SCARNA20-201ENST00000516768 TTC13Q8NBP0 860 aa11.18□□□□□ -0.62
SCARNA20-201ENST00000516768 TRIM58Q8NG06 486 aa11.18□□□□□ -0.62
SCARNA20-201ENST00000516768 SPATA22Q8NHS9 363 aa11.18□□□□□ -0.62
SCARNA20-201ENST00000516768 RHBDD1Q8TEB9 315 aa11.18□□□□□ -0.62
SCARNA20-201ENST00000516768 SAP25Q8TEE9 199 aa11.18□□□□□ -0.62
SCARNA20-201ENST00000516768 CAMK1GQ96NX5 476 aa11.18□□□□□ -0.62
SCARNA20-201ENST00000516768 QKIQ96PU8 341 aaKnown RBP eCLIP11.18□□□□□ -0.62
SCARNA20-201ENST00000516768 LYSMD1Q96S90 227 aa11.18□□□□□ -0.62
SCARNA20-201ENST00000516768 ADGRE3Q9BY15 652 aa11.18□□□□□ -0.62
SCARNA20-201ENST00000516768 C10orf88Q9H8K7 445 aa11.18□□□□□ -0.62
SCARNA20-201ENST00000516768 USP29Q9HBJ7 922 aa11.18□□□□□ -0.62
SCARNA20-201ENST00000516768 KCTD5Q9NXV2 234 aa11.18□□□□□ -0.62
SCARNA20-201ENST00000516768 DNAH14Q0VDD8 3507 aa11.18□□□□□ -0.62
SCARNA20-201ENST00000516768 A0A0U1RQS6 177 aa11.17□□□□□ -0.62
SCARNA20-201ENST00000516768 GOLGA6L9A6NEM1 432 aa11.17□□□□□ -0.62
SCARNA20-201ENST00000516768 PSMD11O00231 422 aa11.17□□□□□ -0.62
SCARNA20-201ENST00000516768 GIPC1O14908 333 aa11.17□□□□□ -0.62
SCARNA20-201ENST00000516768 FLRT2O43155 660 aa11.17□□□□□ -0.62
SCARNA20-201ENST00000516768 MT-CYBP00156 380 aaPredicted RBP11.17□□□□□ -0.62
SCARNA20-201ENST00000516768 EPOP01588 193 aa11.17□□□□□ -0.62
SCARNA20-201ENST00000516768 ALPIP09923 528 aa11.17□□□□□ -0.62
SCARNA20-201ENST00000516768 ZNF30P17039 623 aa11.17□□□□□ -0.62
SCARNA20-201ENST00000516768 CTPS1P17812 591 aa11.17□□□□□ -0.62
SCARNA20-201ENST00000516768 LHCGRP22888 699 aa11.17□□□□□ -0.62
SCARNA20-201ENST00000516768 IGFALSP35858 605 aa11.17□□□□□ -0.62
SCARNA20-201ENST00000516768 CDK18Q07002 472 aa11.17□□□□□ -0.62
SCARNA20-201ENST00000516768 PDE1CQ14123 709 aaPredicted RBP11.17□□□□□ -0.62
SCARNA20-201ENST00000516768 ARHGEF7Q14155 803 aa11.17□□□□□ -0.62
SCARNA20-201ENST00000516768 PTK2BQ14289 1009 aa11.17□□□□□ -0.62
SCARNA20-201ENST00000516768 GSE1Q14687 1217 aa11.17□□□□□ -0.62
SCARNA20-201ENST00000516768 ACOX1Q15067 660 aa11.17□□□□□ -0.62
SCARNA20-201ENST00000516768 CNGA3Q16281 694 aa11.17□□□□□ -0.62
SCARNA20-201ENST00000516768 CDKN3Q16667 212 aa11.17□□□□□ -0.62
SCARNA20-201ENST00000516768 PSAPL1Q6NUJ1 521 aa11.17□□□□□ -0.62
SCARNA20-201ENST00000516768 DARS2Q6PI48 645 aaKnown RBP11.17□□□□□ -0.62
SCARNA20-201ENST00000516768 KDM7AQ6ZMT4 941 aa11.17□□□□□ -0.62
SCARNA20-201ENST00000516768 KANSL1Q7Z3B3 1105 aa11.17□□□□□ -0.62
SCARNA20-201ENST00000516768 KDELC2Q7Z4H8 507 aa11.17□□□□□ -0.62
SCARNA20-201ENST00000516768 TECPR1Q7Z6L1 1165 aa11.17□□□□□ -0.62
SCARNA20-201ENST00000516768 TSPAN33Q86UF1 283 aa11.17□□□□□ -0.62
SCARNA20-201ENST00000516768 NLRP8Q86W28 1048 aa11.17□□□□□ -0.62
SCARNA20-201ENST00000516768 NAXDQ8IW45 347 aa11.17□□□□□ -0.62
SCARNA20-201ENST00000516768 RAVER1Q8IY67 606 aaKnown RBP11.17□□□□□ -0.62
SCARNA20-201ENST00000516768 PLA2G15Q8NCC3 412 aa11.17□□□□□ -0.62
SCARNA20-201ENST00000516768 DEFB124Q8NES8 71 aa11.17□□□□□ -0.62
SCARNA20-201ENST00000516768 SETD7Q8WTS6 366 aaKnown RBP11.17□□□□□ -0.62
SCARNA20-201ENST00000516768 ALS2CR12Q96Q35 445 aa11.17□□□□□ -0.62
SCARNA20-201ENST00000516768 SMIM14Q96QK8 99 aa11.17□□□□□ -0.62
SCARNA20-201ENST00000516768 FCRL5Q96RD9 977 aa11.17□□□□□ -0.62
SCARNA20-201ENST00000516768 TRIB3Q96RU7 358 aa11.17□□□□□ -0.62
SCARNA20-201ENST00000516768 FERMT1Q9BQL6 677 aa11.17□□□□□ -0.62
SCARNA20-201ENST00000516768 APOOQ9BUR5 198 aa11.17□□□□□ -0.62
SCARNA20-201ENST00000516768 MLPHQ9BV36 600 aaPredicted RBP11.17□□□□□ -0.62
SCARNA20-201ENST00000516768 PCOLCE2Q9UKZ9 415 aa11.17□□□□□ -0.62
SCARNA20-201ENST00000516768 LOC285095A0A1B0GVY8 99 aa11.16□□□□□ -0.62
SCARNA20-201ENST00000516768 TCRBV7S2A1N4TA0A589 114 aa11.16□□□□□ -0.62
SCARNA20-201ENST00000516768 GOLGA8CPA6NN73 597 aa11.16□□□□□ -0.62
SCARNA20-201ENST00000516768 CLDN7O95471 211 aa11.16□□□□□ -0.62
SCARNA20-201ENST00000516768 CSF2P04141 144 aa11.16□□□□□ -0.62
SCARNA20-201ENST00000516768 PTMAP06454 111 aaKnown RBP11.16□□□□□ -0.62
SCARNA20-201ENST00000516768 ITGAVP06756 1048 aa11.16□□□□□ -0.62
SCARNA20-201ENST00000516768 HOXC4P09017 264 aaPredicted RBP11.16□□□□□ -0.62
SCARNA20-201ENST00000516768 DGKAP23743 735 aa11.16□□□□□ -0.62
SCARNA20-201ENST00000516768 NOVA1P51513 510 aaKnown RBP11.16□□□□□ -0.62
SCARNA20-201ENST00000516768 THOP1P52888 689 aa11.16□□□□□ -0.62
SCARNA20-201ENST00000516768 IL9RQ01113 521 aa11.16□□□□□ -0.62
SCARNA20-201ENST00000516768 EIF2B5Q13144 721 aaKnown RBP11.16□□□□□ -0.62
SCARNA20-201ENST00000516768 MTM1Q13496 603 aa11.16□□□□□ -0.62
SCARNA20-201ENST00000516768 IRF4Q15306 451 aa11.16□□□□□ -0.62
SCARNA20-201ENST00000516768 TRIP6Q15654 476 aaKnown RBP11.16□□□□□ -0.62
SCARNA20-201ENST00000516768 QPCTQ16769 361 aa11.16□□□□□ -0.62
SCARNA20-201ENST00000516768 TPRG1LQ5T0D9 272 aa11.16□□□□□ -0.62
SCARNA20-201ENST00000516768 N4BP2L1Q5TBK1 243 aaPredicted RBP11.16□□□□□ -0.62
SCARNA20-201ENST00000516768 PNCKQ6P2M8 343 aa11.16□□□□□ -0.62
SCARNA20-201ENST00000516768 Q6ZVL8 140 aa11.16□□□□□ -0.62
SCARNA20-201ENST00000516768 HSD11B1LQ7Z5J1 315 aa11.16□□□□□ -0.62
SCARNA20-201ENST00000516768 PTAR1Q7Z6K3 402 aaPredicted RBP11.16□□□□□ -0.62
SCARNA20-201ENST00000516768 GATAD2AQ86YP4 633 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms