RNA–Protein interactions for RNA: ENST00000515174.5

SNF8-214, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 823 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-214ENST00000515174 USP4Q13107 963 aa10.24□□□□□ -0.77
SNF8-214ENST00000515174 STX3Q13277 289 aa10.24□□□□□ -0.77
SNF8-214ENST00000515174 CTBP1Q13363 440 aa10.24□□□□□ -0.77
SNF8-214ENST00000515174 SEPT6Q14141 434 aa10.24□□□□□ -0.77
SNF8-214ENST00000515174 USP10Q14694 798 aaKnown RBP10.24□□□□□ -0.77
SNF8-214ENST00000515174 DUSP6Q16828 381 aa10.24□□□□□ -0.77
SNF8-214ENST00000515174 TYSND1Q2T9J0 566 aa10.24□□□□□ -0.77
SNF8-214ENST00000515174 FASTKD1Q53R41 847 aaKnown RBP10.24□□□□□ -0.77
SNF8-214ENST00000515174 TAF1BQ53T94 588 aaPredicted RBP10.24□□□□□ -0.77
SNF8-214ENST00000515174 PPM1JQ5JR12 505 aa10.24□□□□□ -0.77
SNF8-214ENST00000515174 MBLAC2Q68D91 279 aa10.24□□□□□ -0.77
SNF8-214ENST00000515174 ZNF470Q6ECI4 717 aa10.24□□□□□ -0.77
SNF8-214ENST00000515174 FAM47EQ6ZV65 393 aa10.24□□□□□ -0.77
SNF8-214ENST00000515174 KDELC2Q7Z4H8 507 aa10.24□□□□□ -0.77
SNF8-214ENST00000515174 SDCCAG8Q86SQ7 713 aaPredicted RBP10.24□□□□□ -0.77
SNF8-214ENST00000515174 RBM23Q86U06 439 aaKnown RBP10.24□□□□□ -0.77
SNF8-214ENST00000515174 DENND6AQ8IWF6 608 aa10.24□□□□□ -0.77
SNF8-214ENST00000515174 ADHFE1Q8IWW8 467 aa10.24□□□□□ -0.77
SNF8-214ENST00000515174 TMEM151AQ8N4L1 468 aa10.24□□□□□ -0.77
SNF8-214ENST00000515174 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.24□□□□□ -0.77
SNF8-214ENST00000515174 VN1R2Q8NFZ6 395 aa10.24□□□□□ -0.77
SNF8-214ENST00000515174 C10orf82Q8WW14 230 aa10.24□□□□□ -0.77
SNF8-214ENST00000515174 SREK1Q8WXA9 508 aaKnown RBP10.24□□□□□ -0.77
SNF8-214ENST00000515174 STON2Q8WXE9 905 aa10.24□□□□□ -0.77
SNF8-214ENST00000515174 IRF7Q92985 503 aa10.24□□□□□ -0.77
SNF8-214ENST00000515174 ZNF707Q96C28 371 aaPredicted RBP10.24□□□□□ -0.77
SNF8-214ENST00000515174 CDKN2AIPNLQ96HQ2 116 aa10.24□□□□□ -0.77
SNF8-214ENST00000515174 TUBGCP5Q96RT8 1024 aa10.24□□□□□ -0.77
SNF8-214ENST00000515174 CPEB1Q9BZB8 566 aaKnown RBP10.24□□□□□ -0.77
SNF8-214ENST00000515174 CEP44Q9C0F1 390 aa10.24□□□□□ -0.77
SNF8-214ENST00000515174 C12orf65Q9H3J6 166 aaKnown RBP10.24□□□□□ -0.77
SNF8-214ENST00000515174 FAM96AQ9H5X1 160 aa10.24□□□□□ -0.77
SNF8-214ENST00000515174 STN1Q9H668 368 aaKnown RBP10.24□□□□□ -0.77
SNF8-214ENST00000515174 NMRAL1Q9HBL8 299 aa10.24□□□□□ -0.77
SNF8-214ENST00000515174 POPDC3Q9HBV1 291 aa10.24□□□□□ -0.77
SNF8-214ENST00000515174 INTS10Q9NVR2 710 aaKnown RBP10.24□□□□□ -0.77
SNF8-214ENST00000515174 GGT7Q9UJ14 662 aa10.24□□□□□ -0.77
SNF8-214ENST00000515174 FBXO10Q9UK96 956 aa10.24□□□□□ -0.77
SNF8-214ENST00000515174 SLC39A10Q9ULF5 831 aa10.24□□□□□ -0.77
SNF8-214ENST00000515174 CHKBQ9Y259 395 aa10.24□□□□□ -0.77
SNF8-214ENST00000515174 HS3ST2Q9Y278 367 aa10.24□□□□□ -0.77
SNF8-214ENST00000515174 VPS9D1Q9Y2B5 631 aa10.24□□□□□ -0.77
SNF8-214ENST00000515174 PPIL1Q9Y3C6 166 aa10.24□□□□□ -0.77
SNF8-214ENST00000515174 HCFC2Q9Y5Z7 792 aa10.24□□□□□ -0.77
SNF8-214ENST00000515174 REV3LO60673 3130 aa10.23□□□□□ -0.77
SNF8-214ENST00000515174 FAM95CA0A1B0GW59 222 aa10.23□□□□□ -0.77
SNF8-214ENST00000515174 TTC24A2A3L6 582 aaPredicted RBP10.23□□□□□ -0.77
SNF8-214ENST00000515174 WDR91A4D1P6 747 aa10.23□□□□□ -0.77
SNF8-214ENST00000515174 ATP5HO75947 161 aa10.23□□□□□ -0.77
SNF8-214ENST00000515174 FSBPO95073 299 aa10.23□□□□□ -0.77
SNF8-214ENST00000515174 KLHL2O95198 593 aa10.23□□□□□ -0.77
SNF8-214ENST00000515174 PGLSO95336 258 aa10.23□□□□□ -0.77
SNF8-214ENST00000515174 DLDP09622 509 aaKnown RBP10.23□□□□□ -0.77
SNF8-214ENST00000515174 SLC35E2BP0CK96 405 aa10.23□□□□□ -0.77
SNF8-214ENST00000515174 FGF3P11487 239 aaPredicted RBP10.23□□□□□ -0.77
SNF8-214ENST00000515174 NEFHP12036 1026 aa10.23□□□□□ -0.77
SNF8-214ENST00000515174 GRIA4P48058 902 aa10.23□□□□□ -0.77
SNF8-214ENST00000515174 NRIP1P48552 1158 aa10.23□□□□□ -0.77
SNF8-214ENST00000515174 SUOXP51687 545 aa10.23□□□□□ -0.77
SNF8-214ENST00000515174 ARSDP51689 593 aa10.23□□□□□ -0.77
SNF8-214ENST00000515174 RHOAP61586 193 aa10.23□□□□□ -0.77
SNF8-214ENST00000515174 TMPRSS15P98073 1019 aa10.23□□□□□ -0.77
SNF8-214ENST00000515174 PCLAFQ15004 111 aa10.23□□□□□ -0.77
SNF8-214ENST00000515174 TEAD2Q15562 447 aa10.23□□□□□ -0.77
SNF8-214ENST00000515174 ZNF77Q15935 545 aa10.23□□□□□ -0.77
SNF8-214ENST00000515174 FAM91A1Q658Y4 838 aa10.23□□□□□ -0.77
SNF8-214ENST00000515174 FAM45BPQ6NSW5 357 aa10.23□□□□□ -0.77
SNF8-214ENST00000515174 CMC1Q7Z7K0 106 aa10.23□□□□□ -0.77
SNF8-214ENST00000515174 ADGRG2Q8IZP9 1017 aa10.23□□□□□ -0.77
SNF8-214ENST00000515174 APCDD1Q8J025 514 aa10.23□□□□□ -0.77
SNF8-214ENST00000515174 PLD6Q8N2A8 252 aaKnown RBP10.23□□□□□ -0.77
SNF8-214ENST00000515174 TTC30BQ8N4P2 665 aa10.23□□□□□ -0.77
SNF8-214ENST00000515174 OR4L1Q8NH43 312 aa10.23□□□□□ -0.77
SNF8-214ENST00000515174 FAM45AQ8TCE6 357 aa10.23□□□□□ -0.77
SNF8-214ENST00000515174 WFDC5Q8TCV5 224 aa10.23□□□□□ -0.77
SNF8-214ENST00000515174 TCEAL4Q96EI5 215 aa10.23□□□□□ -0.77
SNF8-214ENST00000515174 UBXN10Q96LJ8 280 aa10.23□□□□□ -0.77
SNF8-214ENST00000515174 TBATAQ96M53 351 aa10.23□□□□□ -0.77
SNF8-214ENST00000515174 TSNARE1Q96NA8 513 aa10.23□□□□□ -0.77
SNF8-214ENST00000515174 GPR78Q96P69 363 aa10.23□□□□□ -0.77
SNF8-214ENST00000515174 LYSMD1Q96S90 227 aa10.23□□□□□ -0.77
SNF8-214ENST00000515174 CDCA3Q99618 268 aaPredicted RBP10.23□□□□□ -0.77
SNF8-214ENST00000515174 OMDQ99983 421 aa10.23□□□□□ -0.77
SNF8-214ENST00000515174 TUBB6Q9BUF5 446 aa10.23□□□□□ -0.77
SNF8-214ENST00000515174 NSUN3Q9H649 340 aaKnown RBP10.23□□□□□ -0.77
SNF8-214ENST00000515174 HCFC1R1Q9NWW0 138 aa10.23□□□□□ -0.77
SNF8-214ENST00000515174 KCNK4Q9NYG8 393 aa10.23□□□□□ -0.77
SNF8-214ENST00000515174 MUTYHQ9UIF7 546 aa10.23□□□□□ -0.77
SNF8-214ENST00000515174 INTS6Q9UL03 887 aaKnown RBP10.23□□□□□ -0.77
SNF8-214ENST00000515174 VWA7Q9Y334 891 aa10.23□□□□□ -0.77
SNF8-214ENST00000515174 ACTL7AQ9Y615 435 aa10.23□□□□□ -0.77
SNF8-214ENST00000515174 CCDC162PA2VCL2 907 aa10.22□□□□□ -0.77
SNF8-214ENST00000515174 TMEM114B3SHH9 223 aa10.22□□□□□ -0.77
SNF8-214ENST00000515174 G3V2L1 256 aa10.22□□□□□ -0.77
SNF8-214ENST00000515174 GOLGA8TH3BQL2 631 aa10.22□□□□□ -0.77
SNF8-214ENST00000515174 TRAFD1O14545 582 aaPredicted RBP10.22□□□□□ -0.77
SNF8-214ENST00000515174 PFDN6O15212 129 aa10.22□□□□□ -0.77
SNF8-214ENST00000515174 CD3EAPO15446 510 aaKnown RBP10.22□□□□□ -0.77
SNF8-214ENST00000515174 TRIM13O60858 407 aa10.22□□□□□ -0.77
SNF8-214ENST00000515174 DNAJC6O75061 913 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms