RNA–Protein interactions for RNA: ENST00000514777.1

SMAD5-209, Transcript of SMAD family member 5, humanhuman

TSL 3

Gene SMAD5, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-209ENST00000514777 AKAP7Q9P0M2 348 aaPredicted RBP13.13□□□□□ -0.31
SMAD5-209ENST00000514777 TMEM9Q9P0T7 183 aa13.13□□□□□ -0.31
SMAD5-209ENST00000514777 PILRAQ9UKJ1 303 aa13.13□□□□□ -0.31
SMAD5-209ENST00000514777 ATP8A1Q9Y2Q0 1164 aa13.13□□□□□ -0.31
SMAD5-209ENST00000514777 LOC101059948A0A1B0GTJ6 334 aa13.12□□□□□ -0.31
SMAD5-209ENST00000514777 PRSS38A1L453 326 aa13.12□□□□□ -0.31
SMAD5-209ENST00000514777 CFAP69A5D8W1 941 aa13.12□□□□□ -0.31
SMAD5-209ENST00000514777 RHPN2P1A8MT19 583 aa13.12□□□□□ -0.31
SMAD5-209ENST00000514777 K7EM74 188 aa13.12□□□□□ -0.31
SMAD5-209ENST00000514777 CACNB4O00305 520 aaPredicted RBP13.12□□□□□ -0.31
SMAD5-209ENST00000514777 PPM1DO15297 605 aa13.12□□□□□ -0.31
SMAD5-209ENST00000514777 MTSS1O43312 755 aa13.12□□□□□ -0.31
SMAD5-209ENST00000514777 ECEL1O95672 775 aa13.12□□□□□ -0.31
SMAD5-209ENST00000514777 CCNB1P14635 433 aa13.12□□□□□ -0.31
SMAD5-209ENST00000514777 MPSTP25325 297 aa13.12□□□□□ -0.31
SMAD5-209ENST00000514777 OAS2P29728 719 aaKnown RBP13.12□□□□□ -0.31
SMAD5-209ENST00000514777 CSF2RBP32927 897 aa13.12□□□□□ -0.31
SMAD5-209ENST00000514777 RGRP47804 291 aa13.12□□□□□ -0.31
SMAD5-209ENST00000514777 HDAC4P56524 1084 aa13.12□□□□□ -0.31
SMAD5-209ENST00000514777 TRA2AQ13595 282 aaKnown RBP eCLIP13.12□□□□□ -0.31
SMAD5-209ENST00000514777 CLPPQ16740 277 aaPredicted RBP13.12□□□□□ -0.31
SMAD5-209ENST00000514777 TAF3Q5VWG9 929 aa13.12□□□□□ -0.31
SMAD5-209ENST00000514777 TIPARPQ7Z3E1 657 aaKnown RBP13.12□□□□□ -0.31
SMAD5-209ENST00000514777 PHLDB2Q86SQ0 1253 aa13.12□□□□□ -0.31
SMAD5-209ENST00000514777 CREBRFQ8IUR6 639 aa13.12□□□□□ -0.31
SMAD5-209ENST00000514777 PYROXD2Q8N2H3 581 aa13.12□□□□□ -0.31
SMAD5-209ENST00000514777 BMPERQ8N8U9 685 aa13.12□□□□□ -0.31
SMAD5-209ENST00000514777 OR4D9Q8NGE8 314 aa13.12□□□□□ -0.31
SMAD5-209ENST00000514777 JOSD2Q8TAC2 188 aa13.12□□□□□ -0.31
SMAD5-209ENST00000514777 GPT2Q8TD30 523 aa13.12□□□□□ -0.31
SMAD5-209ENST00000514777 ZDHHC1Q8WTX9 485 aa13.12□□□□□ -0.31
SMAD5-209ENST00000514777 PTCD2Q8WV60 388 aaKnown RBP13.12□□□□□ -0.31
SMAD5-209ENST00000514777 CENPIQ92674 756 aaPredicted RBP13.12□□□□□ -0.31
SMAD5-209ENST00000514777 NSMCE3Q96MG7 304 aa13.12□□□□□ -0.31
SMAD5-209ENST00000514777 PDCL3Q9H2J4 239 aa13.12□□□□□ -0.31
SMAD5-209ENST00000514777 LRRC4CQ9HCJ2 640 aa13.12□□□□□ -0.31
SMAD5-209ENST00000514777 SLC39A1Q9NY26 324 aa13.12□□□□□ -0.31
SMAD5-209ENST00000514777 HOOK1Q9UJC3 728 aaKnown RBP13.12□□□□□ -0.31
SMAD5-209ENST00000514777 MYO9AB2RTY4 2548 aa13.12□□□□□ -0.31
SMAD5-209ENST00000514777 RASA4BC9J798 803 aa13.11□□□□□ -0.31
SMAD5-209ENST00000514777 RASA4O43374 803 aa13.11□□□□□ -0.31
SMAD5-209ENST00000514777 PRKAR1AP10644 381 aa13.11□□□□□ -0.31
SMAD5-209ENST00000514777 THRAP10827 490 aa13.11□□□□□ -0.31
SMAD5-209ENST00000514777 AK4P27144 223 aaPredicted RBP13.11□□□□□ -0.31
SMAD5-209ENST00000514777 STAT1P42224 750 aa13.11□□□□□ -0.31
SMAD5-209ENST00000514777 BPIFB4P59827 614 aa13.11□□□□□ -0.31
SMAD5-209ENST00000514777 NOMO3P69849 1222 aa13.11□□□□□ -0.31
SMAD5-209ENST00000514777 ANKS6Q68DC2 871 aa13.11□□□□□ -0.31
SMAD5-209ENST00000514777 ERAP2Q6P179 960 aa13.11□□□□□ -0.31
SMAD5-209ENST00000514777 PNCKQ6P2M8 343 aa13.11□□□□□ -0.31
SMAD5-209ENST00000514777 NOP9Q86U38 636 aaKnown RBP13.11□□□□□ -0.31
SMAD5-209ENST00000514777 ZNF354CQ86Y25 554 aa13.11□□□□□ -0.31
SMAD5-209ENST00000514777 DNAAF5Q86Y56 855 aa13.11□□□□□ -0.31
SMAD5-209ENST00000514777 NAGSQ8N159 534 aa13.11□□□□□ -0.31
SMAD5-209ENST00000514777 RTL3Q8N8U3 475 aaKnown RBP13.11□□□□□ -0.31
SMAD5-209ENST00000514777 AGBL5Q8NDL9 886 aa13.11□□□□□ -0.31
SMAD5-209ENST00000514777 KIAA1524Q8TCG1 905 aa13.11□□□□□ -0.31
SMAD5-209ENST00000514777 ZNF641Q96N77 438 aaPredicted RBP13.11□□□□□ -0.31
SMAD5-209ENST00000514777 NCAPGQ9BPX3 1015 aa13.11□□□□□ -0.31
SMAD5-209ENST00000514777 PDFQ9HBH1 243 aa13.11□□□□□ -0.31
SMAD5-209ENST00000514777 TAAR2Q9P1P5 351 aa13.11□□□□□ -0.31
SMAD5-209ENST00000514777 MOSPD1Q9UJG1 213 aa13.11□□□□□ -0.31
SMAD5-209ENST00000514777 CREBBPQ92793 2442 aa13.11□□□□□ -0.31
SMAD5-209ENST00000514777 UNC79Q9P2D8 2635 aa13.1□□□□□ -0.31
SMAD5-209ENST00000514777 IGHV1OR21-1A0A087WYE8 117 aa13.1□□□□□ -0.31
SMAD5-209ENST00000514777 GOLGA6L4A6NEF3 574 aa13.1□□□□□ -0.31
SMAD5-209ENST00000514777 PRR19A6NJB7 356 aa13.1□□□□□ -0.31
SMAD5-209ENST00000514777 C2CD4BA6NLJ0 364 aa13.1□□□□□ -0.31
SMAD5-209ENST00000514777 EFCAB7A8K855 629 aa13.1□□□□□ -0.31
SMAD5-209ENST00000514777 B4E171 279 aa13.1□□□□□ -0.31
SMAD5-209ENST00000514777 J3KR12 359 aa13.1□□□□□ -0.31
SMAD5-209ENST00000514777 CAPN5O15484 640 aaPredicted RBP13.1□□□□□ -0.31
SMAD5-209ENST00000514777 FGFR1OPO95684 399 aaKnown RBP13.1□□□□□ -0.31
SMAD5-209ENST00000514777 CEACAM5P06731 702 aa13.1□□□□□ -0.31
SMAD5-209ENST00000514777 MMEP08473 750 aa13.1□□□□□ -0.31
SMAD5-209ENST00000514777 NR1D1P20393 614 aa13.1□□□□□ -0.31
SMAD5-209ENST00000514777 KELP23276 732 aa13.1□□□□□ -0.31
SMAD5-209ENST00000514777 TSPAN7P41732 249 aa13.1□□□□□ -0.31
SMAD5-209ENST00000514777 GPR3P46089 330 aa13.1□□□□□ -0.31
SMAD5-209ENST00000514777 YBEYP58557 167 aaPredicted RBP13.1□□□□□ -0.31
SMAD5-209ENST00000514777 CDC20Q12834 499 aa13.1□□□□□ -0.31
SMAD5-209ENST00000514777 DEFB109BQ30KR1 87 aa13.1□□□□□ -0.31
SMAD5-209ENST00000514777 ATP1A1-AS1Q5TC04 95 aa13.1□□□□□ -0.31
SMAD5-209ENST00000514777 NAA35Q5VZE5 725 aa13.1□□□□□ -0.31
SMAD5-209ENST00000514777 AFMIDQ63HM1 303 aa13.1□□□□□ -0.31
SMAD5-209ENST00000514777 BRAT1Q6PJG6 821 aa13.1□□□□□ -0.31
SMAD5-209ENST00000514777 STRADAQ7RTN6 431 aa13.1□□□□□ -0.31
SMAD5-209ENST00000514777 UNC5BQ8IZJ1 945 aa13.1□□□□□ -0.31
SMAD5-209ENST00000514777 APOBEC4Q8WW27 367 aaKnown RBP13.1□□□□□ -0.31
SMAD5-209ENST00000514777 ECHDC3Q96DC8 303 aa13.1□□□□□ -0.31
SMAD5-209ENST00000514777 RTP4Q96DX8 246 aa13.1□□□□□ -0.31
SMAD5-209ENST00000514777 PDP2Q9P2J9 529 aa13.1□□□□□ -0.31
SMAD5-209ENST00000514777 TNRC6AQ8NDV7 1962 aaKnown RBP13.1□□□□□ -0.31
SMAD5-209ENST00000514777 ITPR2Q14571 2701 aa13.1□□□□□ -0.31
SMAD5-209ENST00000514777 WASH4PA8MWX3 477 aa13.09□□□□□ -0.31
SMAD5-209ENST00000514777 A8MX80 341 aa13.09□□□□□ -0.31
SMAD5-209ENST00000514777 TEX33O43247 280 aa13.09□□□□□ -0.31
SMAD5-209ENST00000514777 LSM8O95777 96 aaKnown RBP13.09□□□□□ -0.31
SMAD5-209ENST00000514777 EPHB2P29323 1055 aa13.09□□□□□ -0.31
SMAD5-209ENST00000514777 CSTF2P33240 577 aaKnown RBP eCLIP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms