RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 GLMNQ92990 594 aa10.49□□□□□ -0.73
HMGXB3-205ENST00000514469 FATE1Q969F0 183 aa10.49□□□□□ -0.73
HMGXB3-205ENST00000514469 TSACCQ96A04 125 aaPredicted RBP10.49□□□□□ -0.73
HMGXB3-205ENST00000514469 PDXPQ96GD0 296 aa10.49□□□□□ -0.73
HMGXB3-205ENST00000514469 MCCC1Q96RQ3 725 aaPredicted RBP10.49□□□□□ -0.73
HMGXB3-205ENST00000514469 RBM15Q96T37 977 aaKnown RBP eCLIP10.49□□□□□ -0.73
HMGXB3-205ENST00000514469 ABHD10Q9NUJ1 306 aa10.49□□□□□ -0.73
HMGXB3-205ENST00000514469 AK5Q9Y6K8 562 aa10.49□□□□□ -0.73
HMGXB3-205ENST00000514469 DGKBQ9Y6T7 804 aa10.49□□□□□ -0.73
HMGXB3-205ENST00000514469 LRRK1Q38SD2 2015 aa10.49□□□□□ -0.73
HMGXB3-205ENST00000514469 ZFYVE26Q68DK2 2539 aa10.48□□□□□ -0.73
HMGXB3-205ENST00000514469 CPED1A4D0V7 1026 aa10.48□□□□□ -0.73
HMGXB3-205ENST00000514469 NPIPB15A6NHN6 443 aaPredicted RBP10.48□□□□□ -0.73
HMGXB3-205ENST00000514469 CACNB4O00305 520 aaPredicted RBP10.48□□□□□ -0.73
HMGXB3-205ENST00000514469 FZD6O60353 706 aa10.48□□□□□ -0.73
HMGXB3-205ENST00000514469 CSO75390 466 aaKnown RBP10.48□□□□□ -0.73
HMGXB3-205ENST00000514469 PGLSO95336 258 aa10.48□□□□□ -0.73
HMGXB3-205ENST00000514469 KRT7P08729 469 aa10.48□□□□□ -0.73
HMGXB3-205ENST00000514469 CTSEP14091 401 aa10.48□□□□□ -0.73
HMGXB3-205ENST00000514469 LHCGRP22888 699 aa10.48□□□□□ -0.73
HMGXB3-205ENST00000514469 NFKBIAP25963 317 aa10.48□□□□□ -0.73
HMGXB3-205ENST00000514469 EIF2S3P41091 472 aaKnown RBP10.48□□□□□ -0.73
HMGXB3-205ENST00000514469 RPIAP49247 311 aa10.48□□□□□ -0.73
HMGXB3-205ENST00000514469 ACOX1Q15067 660 aa10.48□□□□□ -0.73
HMGXB3-205ENST00000514469 TIGD7Q6NT04 549 aaPredicted RBP10.48□□□□□ -0.73
HMGXB3-205ENST00000514469 PELI3Q8N2H9 469 aa10.48□□□□□ -0.73
HMGXB3-205ENST00000514469 CBARPQ8N350 705 aaPredicted RBP10.48□□□□□ -0.73
HMGXB3-205ENST00000514469 PQLC3Q8N755 202 aa10.48□□□□□ -0.73
HMGXB3-205ENST00000514469 PAF1Q8N7H5 531 aa10.48□□□□□ -0.73
HMGXB3-205ENST00000514469 KYQ8NBH2 561 aa10.48□□□□□ -0.73
HMGXB3-205ENST00000514469 KCTD6Q8NC69 237 aa10.48□□□□□ -0.73
HMGXB3-205ENST00000514469 OR56A4Q8NGH8 313 aa10.48□□□□□ -0.73
HMGXB3-205ENST00000514469 TPCN2Q8NHX9 752 aa10.48□□□□□ -0.73
HMGXB3-205ENST00000514469 PDCD6IPQ8WUM4 868 aaKnown RBP10.48□□□□□ -0.73
HMGXB3-205ENST00000514469 HNRNPLLQ8WVV9 542 aaKnown RBP10.48□□□□□ -0.73
HMGXB3-205ENST00000514469 OR1E3Q8WZA6 343 aa10.48□□□□□ -0.73
HMGXB3-205ENST00000514469 NAT6Q93015 286 aa10.48□□□□□ -0.73
HMGXB3-205ENST00000514469 NUS1Q96E22 293 aa10.48□□□□□ -0.73
HMGXB3-205ENST00000514469 DTD2Q96FN9 168 aa10.48□□□□□ -0.73
HMGXB3-205ENST00000514469 POLR1EQ9GZS1 481 aaKnown RBP10.48□□□□□ -0.73
HMGXB3-205ENST00000514469 ABCG4Q9H172 646 aa10.48□□□□□ -0.73
HMGXB3-205ENST00000514469 TSPY26PQ9H489 355 aa10.48□□□□□ -0.73
HMGXB3-205ENST00000514469 DEF6Q9H4E7 631 aa10.48□□□□□ -0.73
HMGXB3-205ENST00000514469 WDR26Q9H7D7 661 aa10.48□□□□□ -0.73
HMGXB3-205ENST00000514469 FGF22Q9HCT0 170 aa10.48□□□□□ -0.73
HMGXB3-205ENST00000514469 NT5MQ9NPB1 228 aa10.48□□□□□ -0.73
HMGXB3-205ENST00000514469 PHTF1Q9UMS5 762 aa10.48□□□□□ -0.73
HMGXB3-205ENST00000514469 PPIL1Q9Y3C6 166 aa10.48□□□□□ -0.73
HMGXB3-205ENST00000514469 ANKRD36A6QL64 1941 aa10.48□□□□□ -0.73
HMGXB3-205ENST00000514469 SMG1Q96Q15 3661 aaKnown RBP10.48□□□□□ -0.73
HMGXB3-205ENST00000514469 ARID1BQ8NFD5 2236 aaPredicted RBP10.48□□□□□ -0.73
HMGXB3-205ENST00000514469 ADAMTS20P59510 1910 aa10.47□□□□□ -0.73
HMGXB3-205ENST00000514469 TMEM202A6NGA9 273 aa10.47□□□□□ -0.73
HMGXB3-205ENST00000514469 A8MX80 341 aa10.47□□□□□ -0.73
HMGXB3-205ENST00000514469 PSMD11O00231 422 aa10.47□□□□□ -0.73
HMGXB3-205ENST00000514469 TNFRSF10CO14798 259 aa10.47□□□□□ -0.73
HMGXB3-205ENST00000514469 MATN3O15232 486 aa10.47□□□□□ -0.73
HMGXB3-205ENST00000514469 TCEA3O75764 348 aa10.47□□□□□ -0.73
HMGXB3-205ENST00000514469 DXOO77932 396 aaKnown RBP10.47□□□□□ -0.73
HMGXB3-205ENST00000514469 TNFP01375 233 aa10.47□□□□□ -0.73
HMGXB3-205ENST00000514469 CYP2A6P11509 494 aaPredicted RBP10.47□□□□□ -0.73
HMGXB3-205ENST00000514469 MYCLP1P12525 358 aaPredicted RBP10.47□□□□□ -0.73
HMGXB3-205ENST00000514469 KELP23276 732 aa10.47□□□□□ -0.73
HMGXB3-205ENST00000514469 CCNCP24863 283 aa10.47□□□□□ -0.73
HMGXB3-205ENST00000514469 PDX1P52945 283 aa10.47□□□□□ -0.73
HMGXB3-205ENST00000514469 GBE1Q04446 702 aa10.47□□□□□ -0.73
HMGXB3-205ENST00000514469 IFI16Q16666 785 aaKnown RBP10.47□□□□□ -0.73
HMGXB3-205ENST00000514469 ISXQ2M1V0 245 aa10.47□□□□□ -0.73
HMGXB3-205ENST00000514469 TBC1D25Q3MII6 688 aa10.47□□□□□ -0.73
HMGXB3-205ENST00000514469 ARMC12Q5T9G4 340 aa10.47□□□□□ -0.73
HMGXB3-205ENST00000514469 PNCKQ6P2M8 343 aa10.47□□□□□ -0.73
HMGXB3-205ENST00000514469 CRTC1Q6UUV9 634 aa10.47□□□□□ -0.73
HMGXB3-205ENST00000514469 RBM44Q6ZP01 1051 aaKnown RBP10.47□□□□□ -0.73
HMGXB3-205ENST00000514469 USP45Q70EL2 814 aa10.47□□□□□ -0.73
HMGXB3-205ENST00000514469 RD3Q7Z3Z2 195 aa10.47□□□□□ -0.73
HMGXB3-205ENST00000514469 PDZD3Q86UT5 571 aa10.47□□□□□ -0.73
HMGXB3-205ENST00000514469 GKN2Q86XP6 184 aa10.47□□□□□ -0.73
HMGXB3-205ENST00000514469 MAP7D3Q8IWC1 876 aa10.47□□□□□ -0.73
HMGXB3-205ENST00000514469 WDR48Q8TAF3 677 aa10.47□□□□□ -0.73
HMGXB3-205ENST00000514469 PIH1D2Q8WWB5 315 aa10.47□□□□□ -0.73
HMGXB3-205ENST00000514469 SCG3Q8WXD2 468 aaKnown RBP10.47□□□□□ -0.73
HMGXB3-205ENST00000514469 HDAC11Q96DB2 347 aa10.47□□□□□ -0.73
HMGXB3-205ENST00000514469 SCRN2Q96FV2 425 aa10.47□□□□□ -0.73
HMGXB3-205ENST00000514469 DCBLD2Q96PD2 775 aa10.47□□□□□ -0.73
HMGXB3-205ENST00000514469 TSGA13Q96PP4 275 aa10.47□□□□□ -0.73
HMGXB3-205ENST00000514469 SEMA3CQ99985 751 aa10.47□□□□□ -0.73
HMGXB3-205ENST00000514469 CCDC3Q9BQI4 270 aa10.47□□□□□ -0.73
HMGXB3-205ENST00000514469 LGR4Q9BXB1 951 aa10.47□□□□□ -0.73
HMGXB3-205ENST00000514469 ZNHIT6Q9NWK9 470 aaKnown RBP10.47□□□□□ -0.73
HMGXB3-205ENST00000514469 KCTD5Q9NXV2 234 aa10.47□□□□□ -0.73
HMGXB3-205ENST00000514469 AMACRQ9UHK6 382 aa10.47□□□□□ -0.73
HMGXB3-205ENST00000514469 PADI4Q9UM07 663 aa10.47□□□□□ -0.73
HMGXB3-205ENST00000514469 GPR34Q9UPC5 381 aa10.47□□□□□ -0.73
HMGXB3-205ENST00000514469 DOLKQ9UPQ8 538 aa10.47□□□□□ -0.73
HMGXB3-205ENST00000514469 RAI2Q9Y5P3 530 aa10.47□□□□□ -0.73
HMGXB3-205ENST00000514469 FAM208BQ5VWN6 2430 aa10.47□□□□□ -0.73
HMGXB3-205ENST00000514469 IGSF10Q6WRI0 2623 aa10.47□□□□□ -0.73
HMGXB3-205ENST00000514469 PRSS38A1L453 326 aa10.46□□□□□ -0.73
HMGXB3-205ENST00000514469 C3orf70A6NLC5 250 aaPredicted RBP10.46□□□□□ -0.73
HMGXB3-205ENST00000514469 ZNF487B1APH4 448 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms