RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 OR4D9Q8NGE8 314 aa13.98□□□□□ -0.17
SPCS3-204ENST00000513139 APOBEC4Q8WW27 367 aaKnown RBP13.98□□□□□ -0.17
SPCS3-204ENST00000513139 ART4Q93070 314 aa13.98□□□□□ -0.17
SPCS3-204ENST00000513139 FUBP1Q96AE4 644 aaKnown RBP13.98□□□□□ -0.17
SPCS3-204ENST00000513139 ABHD17AQ96GS6 310 aa13.98□□□□□ -0.17
SPCS3-204ENST00000513139 CCDC74BQ96LY2 380 aa13.98□□□□□ -0.17
SPCS3-204ENST00000513139 DPYSL5Q9BPU6 564 aa13.98□□□□□ -0.17
SPCS3-204ENST00000513139 NUDT22Q9BRQ3 303 aa13.98□□□□□ -0.17
SPCS3-204ENST00000513139 CRACR2AQ9BSW2 395 aa13.98□□□□□ -0.17
SPCS3-204ENST00000513139 EFHD1Q9BUP0 239 aa13.98□□□□□ -0.17
SPCS3-204ENST00000513139 PCDH12Q9NPG4 1184 aa13.98□□□□□ -0.17
SPCS3-204ENST00000513139 IGSF5Q9NSI5 407 aa13.98□□□□□ -0.17
SPCS3-204ENST00000513139 DACH1Q9UI36 760 aa13.98□□□□□ -0.17
SPCS3-204ENST00000513139 TMEM59LQ9UK28 342 aa13.98□□□□□ -0.17
SPCS3-204ENST00000513139 RHPN2P1A8MT19 583 aa13.97□□□□□ -0.17
SPCS3-204ENST00000513139 B4E171 279 aa13.97□□□□□ -0.17
SPCS3-204ENST00000513139 RAD1O60671 282 aa13.97□□□□□ -0.17
SPCS3-204ENST00000513139 PCCBP05166 539 aa13.97□□□□□ -0.17
SPCS3-204ENST00000513139 CD1CP29017 333 aa13.97□□□□□ -0.17
SPCS3-204ENST00000513139 CSTF2P33240 577 aaKnown RBP eCLIP13.97□□□□□ -0.17
SPCS3-204ENST00000513139 ADRA1BP35368 520 aa13.97□□□□□ -0.17
SPCS3-204ENST00000513139 CLCN1P35523 988 aa13.97□□□□□ -0.17
SPCS3-204ENST00000513139 MMP12P39900 470 aa13.97□□□□□ -0.17
SPCS3-204ENST00000513139 TSPAN7P41732 249 aa13.97□□□□□ -0.17
SPCS3-204ENST00000513139 RAB15P59190 212 aa13.97□□□□□ -0.17
SPCS3-204ENST00000513139 BPIFB4P59827 614 aa13.97□□□□□ -0.17
SPCS3-204ENST00000513139 RHOAP61586 193 aa13.97□□□□□ -0.17
SPCS3-204ENST00000513139 KLRB1Q12918 225 aa13.97□□□□□ -0.17
SPCS3-204ENST00000513139 LACTB2Q53H82 288 aaPredicted RBP13.97□□□□□ -0.17
SPCS3-204ENST00000513139 DCAF12Q5T6F0 453 aa13.97□□□□□ -0.17
SPCS3-204ENST00000513139 TRNP1Q6NT89 227 aa13.97□□□□□ -0.17
SPCS3-204ENST00000513139 RWDD4Q6NW29 188 aaKnown RBP13.97□□□□□ -0.17
SPCS3-204ENST00000513139 BRAT1Q6PJG6 821 aa13.97□□□□□ -0.17
SPCS3-204ENST00000513139 LEKR1Q6ZMV7 388 aa13.97□□□□□ -0.17
SPCS3-204ENST00000513139 GBP6Q6ZN66 633 aa13.97□□□□□ -0.17
SPCS3-204ENST00000513139 SLC47A2Q86VL8 602 aa13.97□□□□□ -0.17
SPCS3-204ENST00000513139 PLA2G15Q8NCC3 412 aa13.97□□□□□ -0.17
SPCS3-204ENST00000513139 PMEPA1Q969W9 287 aa13.97□□□□□ -0.17
SPCS3-204ENST00000513139 KIAA1143Q96AT1 154 aaPredicted RBP13.97□□□□□ -0.17
SPCS3-204ENST00000513139 CFAP57Q96MR6 1250 aa13.97□□□□□ -0.17
SPCS3-204ENST00000513139 ZNF641Q96N77 438 aaPredicted RBP13.97□□□□□ -0.17
SPCS3-204ENST00000513139 TEFMQ96QE5 360 aaKnown RBP13.97□□□□□ -0.17
SPCS3-204ENST00000513139 SUV39H2Q9H5I1 410 aa13.97□□□□□ -0.17
SPCS3-204ENST00000513139 MRPL40Q9NQ50 206 aaKnown RBP13.97□□□□□ -0.17
SPCS3-204ENST00000513139 PLCB1Q9NQ66 1216 aa13.97□□□□□ -0.17
SPCS3-204ENST00000513139 PLEKHB1Q9UF11 243 aaPredicted RBP13.97□□□□□ -0.17
SPCS3-204ENST00000513139 PILRAQ9UKJ1 303 aa13.97□□□□□ -0.17
SPCS3-204ENST00000513139 DAAM1Q9Y4D1 1078 aa13.97□□□□□ -0.17
SPCS3-204ENST00000513139 GTPBP10A4D1E9 387 aaKnown RBP13.96□□□□□ -0.17
SPCS3-204ENST00000513139 PDE2AO00408 941 aaPredicted RBP13.96□□□□□ -0.17
SPCS3-204ENST00000513139 NKX2-8O15522 239 aa13.96□□□□□ -0.17
SPCS3-204ENST00000513139 FGFR1OPO95684 399 aaKnown RBP13.96□□□□□ -0.17
SPCS3-204ENST00000513139 CCNB1P14635 433 aa13.96□□□□□ -0.17
SPCS3-204ENST00000513139 MAP4P27816 1152 aaKnown RBP13.96□□□□□ -0.17
SPCS3-204ENST00000513139 MC1RQ01726 317 aa13.96□□□□□ -0.17
SPCS3-204ENST00000513139 CDC20Q12834 499 aa13.96□□□□□ -0.17
SPCS3-204ENST00000513139 SEPT6Q14141 434 aa13.96□□□□□ -0.17
SPCS3-204ENST00000513139 EXOC3L4Q17RC7 722 aa13.96□□□□□ -0.17
SPCS3-204ENST00000513139 HSP90AA4PQ58FG1 418 aa13.96□□□□□ -0.17
SPCS3-204ENST00000513139 CT47A1Q5JQC4 288 aaPredicted RBP13.96□□□□□ -0.17
SPCS3-204ENST00000513139 DNAAF5Q86Y56 855 aa13.96□□□□□ -0.17
SPCS3-204ENST00000513139 CCL4L1Q8NHW4 92 aa13.96□□□□□ -0.17
SPCS3-204ENST00000513139 TBC1D31Q96DN5 1066 aa13.96□□□□□ -0.17
SPCS3-204ENST00000513139 NCAPGQ9BPX3 1015 aa13.96□□□□□ -0.17
SPCS3-204ENST00000513139 SPRY4Q9C004 299 aa13.96□□□□□ -0.17
SPCS3-204ENST00000513139 GPN2Q9H9Y4 310 aaPredicted RBP13.96□□□□□ -0.17
SPCS3-204ENST00000513139 CYP4F12Q9HCS2 524 aa13.96□□□□□ -0.17
SPCS3-204ENST00000513139 SAMSN1Q9NSI8 373 aaKnown RBP13.96□□□□□ -0.17
SPCS3-204ENST00000513139 SPATS2LQ9NUQ6 558 aaKnown RBP13.96□□□□□ -0.17
SPCS3-204ENST00000513139 SLC39A1Q9NY26 324 aa13.96□□□□□ -0.17
SPCS3-204ENST00000513139 NEU3Q9UQ49 428 aa13.96□□□□□ -0.17
SPCS3-204ENST00000513139 HIVEP3Q5T1R4 2406 aa13.96□□□□□ -0.17
SPCS3-204ENST00000513139 MED13Q9UHV7 2174 aa13.96□□□□□ -0.18
SPCS3-204ENST00000513139 PRSS38A1L453 326 aa13.95□□□□□ -0.18
SPCS3-204ENST00000513139 PRR19A6NJB7 356 aa13.95□□□□□ -0.18
SPCS3-204ENST00000513139 FOXN3O00409 490 aaPredicted RBP13.95□□□□□ -0.18
SPCS3-204ENST00000513139 INSIG1O15503 277 aa13.95□□□□□ -0.18
SPCS3-204ENST00000513139 LRIG2O94898 1065 aa13.95□□□□□ -0.18
SPCS3-204ENST00000513139 FGF1P05230 155 aa13.95□□□□□ -0.18
SPCS3-204ENST00000513139 THRAP10827 490 aa13.95□□□□□ -0.18
SPCS3-204ENST00000513139 PON1P27169 355 aa13.95□□□□□ -0.18
SPCS3-204ENST00000513139 MAZP56270 477 aaKnown RBP13.95□□□□□ -0.18
SPCS3-204ENST00000513139 APBA1Q02410 837 aa13.95□□□□□ -0.18
SPCS3-204ENST00000513139 PEX6Q13608 980 aa13.95□□□□□ -0.18
SPCS3-204ENST00000513139 TPD52L1Q16890 204 aaPredicted RBP13.95□□□□□ -0.18
SPCS3-204ENST00000513139 CREBRFQ8IUR6 639 aa13.95□□□□□ -0.18
SPCS3-204ENST00000513139 FAM71AQ8IYT1 594 aa13.95□□□□□ -0.18
SPCS3-204ENST00000513139 NLGN4XQ8N0W4 816 aa13.95□□□□□ -0.18
SPCS3-204ENST00000513139 MSANTD4Q8NCY6 345 aa13.95□□□□□ -0.18
SPCS3-204ENST00000513139 NLGN4YQ8NFZ3 816 aaPredicted RBP13.95□□□□□ -0.18
SPCS3-204ENST00000513139 ENOX1Q8TC92 643 aaKnown RBP13.95□□□□□ -0.18
SPCS3-204ENST00000513139 ZDHHC1Q8WTX9 485 aa13.95□□□□□ -0.18
SPCS3-204ENST00000513139 GSDMCQ9BYG8 508 aa13.95□□□□□ -0.18
SPCS3-204ENST00000513139 LHX3Q9UBR4 397 aa13.95□□□□□ -0.18
SPCS3-204ENST00000513139 ATP8A1Q9Y2Q0 1164 aa13.95□□□□□ -0.18
SPCS3-204ENST00000513139 ABCA12Q86UK0 2595 aa13.95□□□□□ -0.18
SPCS3-204ENST00000513139 FAM72CH0Y354 149 aa13.94□□□□□ -0.18
SPCS3-204ENST00000513139 MTSS1O43312 755 aa13.94□□□□□ -0.18
SPCS3-204ENST00000513139 ANKRD17O75179 2603 aaKnown RBP13.94□□□□□ -0.18
SPCS3-204ENST00000513139 RECQL5O94762 991 aaPredicted RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms