RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 COPS8Q99627 209 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 AIF1LQ9BQI0 150 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 TTPALQ9BTX7 342 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 WHRNQ9P202 907 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 PCDHGC5Q9Y5F6 944 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 DDTLA6NHG4 134 aaPredicted RBP5.8□□□□□ -1.48
USP38-203ENST00000511739 OR10H3O60404 316 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 PAEPP09466 180 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 MAPTP10636 758 aaKnown RBP5.8□□□□□ -1.48
USP38-203ENST00000511739 ARF4P18085 180 aaPredicted RBP5.8□□□□□ -1.48
USP38-203ENST00000511739 BGNP21810 368 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 MANFP55145 182 aaKnown RBP5.8□□□□□ -1.48
USP38-203ENST00000511739 METTL21CQ5VZV1 264 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 TMC5Q6UXY8 1006 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 PHC3Q8NDX5 983 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 KIAA1143Q96AT1 154 aaPredicted RBP5.8□□□□□ -1.48
USP38-203ENST00000511739 C18orf25Q96B23 403 aaPredicted RBP5.8□□□□□ -1.48
USP38-203ENST00000511739 MCRS1Q96EZ8 462 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 RNF19AQ9NV58 838 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 CCDC167Q9P0B6 97 aa5.8□□□□□ -1.48
USP38-203ENST00000511739 ALS2Q96Q42 1657 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 WASHC1A8K0Z3 465 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 WASH3PC4AMC7 463 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 EIF3HO15372 352 aaKnown RBP eCLIP5.79□□□□□ -1.48
USP38-203ENST00000511739 CLOCKO15516 846 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 AP5Z1O43299 807 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 TLR5O60602 858 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 ULK1O75385 1050 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 CD44P16070 742 aaKnown RBP5.79□□□□□ -1.48
USP38-203ENST00000511739 ACADSP16219 412 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 PDHA2P29803 388 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 ALDH3A2P51648 485 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 PUDPQ08623 228 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 DLG1Q12959 904 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 GALNT3Q14435 633 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 ZCWPW2Q504Y3 356 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 MZT2BQ6NZ67 158 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 TRIM40Q6P9F5 258 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 WASH2PQ6VEQ5 465 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 OR2L5Q8NG80 312 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 ZNF606Q8WXB4 792 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 NELL1Q92832 810 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 LPPQ93052 612 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 OMA1Q96E52 524 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 NUAK2Q9H093 628 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 LDAHQ9H6V9 325 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 TMEM27Q9HBJ8 222 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 DLGAP2Q9P1A6 1054 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 A0A0X1KG70 313 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 OR6C75A6NL08 312 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 PEX14O75381 377 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 PGM3O95394 542 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 BCL10O95999 233 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 SERPINE1P05121 402 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 NPR3P17342 541 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 CMPK1P30085 196 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 RASA2Q15283 850 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 ZNF720Q7Z2F6 126 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 GPR142Q7Z601 462 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 FBXO30Q8TB52 745 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 SNRNP27Q8WVK2 155 aaKnown RBP5.79□□□□□ -1.48
USP38-203ENST00000511739 MIEF2Q96C03 454 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 EFHD2Q96C19 240 aaPredicted RBP5.79□□□□□ -1.48
USP38-203ENST00000511739 CRISPLD1Q9H336 500 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 EQTNQ9NQ60 294 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 CLDND1Q9NY35 253 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 FBXW2Q9UKT8 454 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 ST3GAL5Q9UNP4 418 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 PHGDHO43175 533 aaKnown RBP5.79□□□□□ -1.48
USP38-203ENST00000511739 PDE5AO76074 875 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 UBXN7O94888 489 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 SHMT1P34896 483 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 AVPR1BP47901 424 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 CXCR3P49682 368 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 GIT2Q14161 759 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 FRG1Q14331 258 aaKnown RBP5.79□□□□□ -1.48
USP38-203ENST00000511739 AAK1Q2M2I8 961 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 TMEM119Q4V9L6 283 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 PHF19Q5T6S3 580 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 KCNT2Q6UVM3 1135 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 CCNI2Q6ZMN8 369 aaPredicted RBP5.79□□□□□ -1.48
USP38-203ENST00000511739 DEF8Q6ZN54 512 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 ATG14Q6ZNE5 492 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 MSANTD1Q6ZTZ1 278 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 KCTD8Q6ZWB6 473 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 HID1Q8IV36 788 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 DEFB107AQ8IZN7 70 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 SLAIN1Q8ND83 568 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 SRFBP1Q8NEF9 429 aaKnown RBP5.79□□□□□ -1.48
USP38-203ENST00000511739 PPP1R13LQ8WUF5 828 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 DNASE1L2Q92874 299 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 RBM18Q96H35 190 aaKnown RBP5.79□□□□□ -1.48
USP38-203ENST00000511739 SEMA3CQ99985 751 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 ALG9Q9H6U8 611 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 PCDH9Q9HC56 1237 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 ZFP14Q9HCL3 533 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 DDX18Q9NVP1 670 aaKnown RBP5.79□□□□□ -1.48
USP38-203ENST00000511739 MCUBQ9NWR8 336 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 MOCS1Q9NZB8 636 aa5.79□□□□□ -1.48
USP38-203ENST00000511739 EFR3BQ9Y2G0 817 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms