RNA–Protein interactions for RNA: ENST00000509644.5

MATR3-236, Transcript of matrin 3, humanhuman

TSL 3

Gene MATR3, Length 750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-236ENST00000509644 FAM46DQ8NEK8 389 aa12.98□□□□□ -0.33
MATR3-236ENST00000509644 PTCD2Q8WV60 388 aaKnown RBP12.98□□□□□ -0.33
MATR3-236ENST00000509644 SPOCK2Q92563 424 aa12.98□□□□□ -0.33
MATR3-236ENST00000509644 TMEM159Q96B96 161 aa12.98□□□□□ -0.33
MATR3-236ENST00000509644 TUBGCP5Q96RT8 1024 aa12.98□□□□□ -0.33
MATR3-236ENST00000509644 SPATS2LQ9NUQ6 558 aaKnown RBP12.98□□□□□ -0.33
MATR3-236ENST00000509644 LRIT1Q9P2V4 623 aa12.98□□□□□ -0.33
MATR3-236ENST00000509644 UBA2Q9UBT2 640 aaPredicted RBP12.98□□□□□ -0.33
MATR3-236ENST00000509644 SIK3Q9Y2K2 1263 aa12.98□□□□□ -0.33
MATR3-236ENST00000509644 ITPR2Q14571 2701 aa12.97□□□□□ -0.33
MATR3-236ENST00000509644 AGRPO00253 132 aa12.97□□□□□ -0.33
MATR3-236ENST00000509644 GRM3Q14832 879 aa12.97□□□□□ -0.33
MATR3-236ENST00000509644 TPD52L1Q16890 204 aaPredicted RBP12.97□□□□□ -0.33
MATR3-236ENST00000509644 CDKAL1Q5VV42 579 aa12.97□□□□□ -0.33
MATR3-236ENST00000509644 TRIM72Q6ZMU5 477 aa12.97□□□□□ -0.33
MATR3-236ENST00000509644 DPPA4Q7L190 304 aa12.97□□□□□ -0.33
MATR3-236ENST00000509644 SRLQ86TD4 932 aa12.97□□□□□ -0.33
MATR3-236ENST00000509644 ARFGAP1Q8N6T3 406 aa12.97□□□□□ -0.33
MATR3-236ENST00000509644 GPBAR1Q8TDU6 330 aa12.97□□□□□ -0.33
MATR3-236ENST00000509644 COQ10AQ96MF6 247 aa12.97□□□□□ -0.33
MATR3-236ENST00000509644 SLC12A9Q9BXP2 914 aa12.97□□□□□ -0.33
MATR3-236ENST00000509644 SLC39A8Q9C0K1 460 aa12.97□□□□□ -0.33
MATR3-236ENST00000509644 CLSTN2Q9H4D0 955 aa12.97□□□□□ -0.33
MATR3-236ENST00000509644 TAB2Q9NYJ8 693 aa12.97□□□□□ -0.33
MATR3-236ENST00000509644 ADAM22Q9P0K1 906 aa12.97□□□□□ -0.33
MATR3-236ENST00000509644 B4DGG1 531 aa12.96□□□□□ -0.33
MATR3-236ENST00000509644 CREB3O43889 395 aa12.96□□□□□ -0.33
MATR3-236ENST00000509644 FGF1P05230 155 aa12.96□□□□□ -0.33
MATR3-236ENST00000509644 CEACAM5P06731 702 aa12.96□□□□□ -0.33
MATR3-236ENST00000509644 EEF1GP26641 437 aaKnown RBP12.96□□□□□ -0.33
MATR3-236ENST00000509644 CD1CP29017 333 aa12.96□□□□□ -0.33
MATR3-236ENST00000509644 PAPOLAP51003 745 aaKnown RBP12.96□□□□□ -0.33
MATR3-236ENST00000509644 NDST2P52849 883 aa12.96□□□□□ -0.33
MATR3-236ENST00000509644 MAZP56270 477 aaKnown RBP12.96□□□□□ -0.33
MATR3-236ENST00000509644 POLR2FP61218 127 aaKnown RBP12.96□□□□□ -0.33
MATR3-236ENST00000509644 BECN1Q14457 450 aa12.96□□□□□ -0.33
MATR3-236ENST00000509644 CA9Q16790 459 aa12.96□□□□□ -0.33
MATR3-236ENST00000509644 EFHC2Q5JST6 749 aa12.96□□□□□ -0.33
MATR3-236ENST00000509644 COLEC12Q5KU26 742 aa12.96□□□□□ -0.33
MATR3-236ENST00000509644 MANEAQ5SRI9 462 aa12.96□□□□□ -0.33
MATR3-236ENST00000509644 ERAP2Q6P179 960 aa12.96□□□□□ -0.33
MATR3-236ENST00000509644 PNCKQ6P2M8 343 aa12.96□□□□□ -0.33
MATR3-236ENST00000509644 ATG14Q6ZNE5 492 aa12.96□□□□□ -0.33
MATR3-236ENST00000509644 ARHGAP36Q6ZRI8 547 aa12.96□□□□□ -0.33
MATR3-236ENST00000509644 CYP4V2Q6ZWL3 525 aaPredicted RBP12.96□□□□□ -0.33
MATR3-236ENST00000509644 TAF8Q7Z7C8 310 aa12.96□□□□□ -0.33
MATR3-236ENST00000509644 ZNF354CQ86Y25 554 aa12.96□□□□□ -0.33
MATR3-236ENST00000509644 ATL2Q8NHH9 583 aa12.96□□□□□ -0.33
MATR3-236ENST00000509644 CELF6Q96J87 481 aaKnown RBP12.96□□□□□ -0.33
MATR3-236ENST00000509644 CMKLR1Q99788 373 aa12.96□□□□□ -0.33
MATR3-236ENST00000509644 NUDT22Q9BRQ3 303 aa12.96□□□□□ -0.33
MATR3-236ENST00000509644 FAM117AQ9C073 453 aa12.96□□□□□ -0.33
MATR3-236ENST00000509644 RDH14Q9HBH5 336 aa12.96□□□□□ -0.33
MATR3-236ENST00000509644 GPATCH2LQ9NWQ4 482 aa12.96□□□□□ -0.33
MATR3-236ENST00000509644 GEMIN8Q9NWZ8 242 aaKnown RBP12.96□□□□□ -0.33
MATR3-236ENST00000509644 SPTBN1Q01082 2364 aaKnown RBP12.96□□□□□ -0.33
MATR3-236ENST00000509644 IGHV5-10-1A0A0J9YXX1 117 aa12.95□□□□□ -0.34
MATR3-236ENST00000509644 PRSS38A1L453 326 aa12.95□□□□□ -0.34
MATR3-236ENST00000509644 FGF10O15520 208 aaPredicted RBP12.95□□□□□ -0.34
MATR3-236ENST00000509644 FGF3P11487 239 aaPredicted RBP12.95□□□□□ -0.34
MATR3-236ENST00000509644 CCNB1P14635 433 aa12.95□□□□□ -0.34
MATR3-236ENST00000509644 XPAP23025 273 aaPredicted RBP12.95□□□□□ -0.34
MATR3-236ENST00000509644 CD82P27701 267 aa12.95□□□□□ -0.34
MATR3-236ENST00000509644 MAPK10P53779 464 aa12.95□□□□□ -0.34
MATR3-236ENST00000509644 AIF1P55008 147 aa12.95□□□□□ -0.34
MATR3-236ENST00000509644 OR1D5P58170 312 aa12.95□□□□□ -0.34
MATR3-236ENST00000509644 KRT31Q15323 416 aa12.95□□□□□ -0.34
MATR3-236ENST00000509644 TP53INP2Q8IXH6 220 aa12.95□□□□□ -0.34
MATR3-236ENST00000509644 NPWQ8N729 165 aa12.95□□□□□ -0.34
MATR3-236ENST00000509644 NKD1Q969G9 470 aa12.95□□□□□ -0.34
MATR3-236ENST00000509644 PEBP4Q96S96 227 aa12.95□□□□□ -0.34
MATR3-236ENST00000509644 NCAPGQ9BPX3 1015 aa12.95□□□□□ -0.34
MATR3-236ENST00000509644 CNPY3Q9BT09 278 aa12.95□□□□□ -0.34
MATR3-236ENST00000509644 SYT11Q9BT88 431 aa12.95□□□□□ -0.34
MATR3-236ENST00000509644 SELENOOQ9BVL4 669 aa12.95□□□□□ -0.34
MATR3-236ENST00000509644 FRMD8Q9BZ67 464 aaPredicted RBP12.95□□□□□ -0.34
MATR3-236ENST00000509644 SPRY4Q9C004 299 aa12.95□□□□□ -0.34
MATR3-236ENST00000509644 VPS16Q9H269 839 aa12.95□□□□□ -0.34
MATR3-236ENST00000509644 CATSPERBQ9H7T0 1116 aa12.95□□□□□ -0.34
MATR3-236ENST00000509644 CYP4F12Q9HCS2 524 aa12.95□□□□□ -0.34
MATR3-236ENST00000509644 NLRC4Q9NPP4 1024 aa12.95□□□□□ -0.34
MATR3-236ENST00000509644 FAM207AQ9NSI2 230 aaPredicted RBP12.95□□□□□ -0.34
MATR3-236ENST00000509644 PCDHGA3Q9Y5H0 932 aa12.95□□□□□ -0.34
MATR3-236ENST00000509644 HEMK1Q9Y5R4 338 aaPredicted RBP12.95□□□□□ -0.34
MATR3-236ENST00000509644 LRBAP50851 2863 aa12.94□□□□□ -0.34
MATR3-236ENST00000509644 CLEC18AA5D8T8 446 aa12.94□□□□□ -0.34
MATR3-236ENST00000509644 CACNB4O00305 520 aaPredicted RBP12.94□□□□□ -0.34
MATR3-236ENST00000509644 PES1O00541 588 aaKnown RBP12.94□□□□□ -0.34
MATR3-236ENST00000509644 HGSO14964 777 aaPredicted RBP12.94□□□□□ -0.34
MATR3-236ENST00000509644 HTRA2O43464 458 aaPredicted RBP12.94□□□□□ -0.34
MATR3-236ENST00000509644 CPNE6O95741 557 aa12.94□□□□□ -0.34
MATR3-236ENST00000509644 PEX11BO96011 259 aa12.94□□□□□ -0.34
MATR3-236ENST00000509644 CALB1P05937 261 aa12.94□□□□□ -0.34
MATR3-236ENST00000509644 ELFN1P0C7U0 828 aa12.94□□□□□ -0.34
MATR3-236ENST00000509644 CSF2RBP32927 897 aa12.94□□□□□ -0.34
MATR3-236ENST00000509644 HTR7P34969 479 aa12.94□□□□□ -0.34
MATR3-236ENST00000509644 STAT1P42224 750 aa12.94□□□□□ -0.34
MATR3-236ENST00000509644 NSFP46459 744 aaKnown RBP12.94□□□□□ -0.34
MATR3-236ENST00000509644 NSUN2Q08J23 767 aaKnown RBP eCLIP12.94□□□□□ -0.34
MATR3-236ENST00000509644 SQSTM1Q13501 440 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms