RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 OPA1O60313 960 aa14.85□□□□□ -0.03
UBE2D3-228ENST00000508974 MT-CO3P00414 261 aa14.85□□□□□ -0.03
UBE2D3-228ENST00000508974 ALPIP09923 528 aa14.85□□□□□ -0.03
UBE2D3-228ENST00000508974 GOLGA6DP0CG33 693 aa14.85□□□□□ -0.03
UBE2D3-228ENST00000508974 VIPR1P32241 457 aa14.85□□□□□ -0.03
UBE2D3-228ENST00000508974 MAN1A1P33908 653 aa14.85□□□□□ -0.03
UBE2D3-228ENST00000508974 PEX5P50542 639 aa14.85□□□□□ -0.03
UBE2D3-228ENST00000508974 DUSP3P51452 185 aaPredicted RBP14.85□□□□□ -0.03
UBE2D3-228ENST00000508974 HK3P52790 923 aa14.85□□□□□ -0.03
UBE2D3-228ENST00000508974 SRP54P61011 504 aaKnown RBP14.85□□□□□ -0.03
UBE2D3-228ENST00000508974 E2F1Q01094 437 aa14.85□□□□□ -0.03
UBE2D3-228ENST00000508974 DSC2Q02487 901 aa14.85□□□□□ -0.03
UBE2D3-228ENST00000508974 CNGA3Q16281 694 aa14.85□□□□□ -0.03
UBE2D3-228ENST00000508974 ARMC12Q5T9G4 340 aa14.85□□□□□ -0.03
UBE2D3-228ENST00000508974 EFL1Q7Z2Z2 1120 aaKnown RBP14.85□□□□□ -0.03
UBE2D3-228ENST00000508974 TSPAN33Q86UF1 283 aa14.85□□□□□ -0.03
UBE2D3-228ENST00000508974 CNGA4Q8IV77 575 aa14.85□□□□□ -0.03
UBE2D3-228ENST00000508974 PQLC3Q8N755 202 aa14.85□□□□□ -0.03
UBE2D3-228ENST00000508974 FAM181AQ8N9Y4 354 aa14.85□□□□□ -0.03
UBE2D3-228ENST00000508974 CCNYQ8ND76 341 aa14.85□□□□□ -0.03
UBE2D3-228ENST00000508974 MAPK15Q8TD08 544 aa14.85□□□□□ -0.03
UBE2D3-228ENST00000508974 FUBP1Q96AE4 644 aaKnown RBP14.85□□□□□ -0.03
UBE2D3-228ENST00000508974 NXPE2Q96DL1 559 aa14.85□□□□□ -0.03
UBE2D3-228ENST00000508974 NUS1Q96E22 293 aa14.85□□□□□ -0.03
UBE2D3-228ENST00000508974 WDR92Q96MX6 357 aa14.85□□□□□ -0.03
UBE2D3-228ENST00000508974 POLR1EQ9GZS1 481 aaKnown RBP14.85□□□□□ -0.03
UBE2D3-228ENST00000508974 ABCG4Q9H172 646 aa14.85□□□□□ -0.03
UBE2D3-228ENST00000508974 SYNDIG1Q9H7V2 258 aa14.85□□□□□ -0.03
UBE2D3-228ENST00000508974 MRPL40Q9NQ50 206 aaKnown RBP14.85□□□□□ -0.03
UBE2D3-228ENST00000508974 EVA1BQ9NVM1 165 aa14.85□□□□□ -0.03
UBE2D3-228ENST00000508974 GOLGA6AQ9NYA3 693 aa14.85□□□□□ -0.03
UBE2D3-228ENST00000508974 GULP1Q9UBP9 304 aa14.85□□□□□ -0.03
UBE2D3-228ENST00000508974 PCDHB1Q9Y5F3 818 aa14.85□□□□□ -0.03
UBE2D3-228ENST00000508974 ADAMTS20P59510 1910 aa14.85□□□□□ -0.03
UBE2D3-228ENST00000508974 COL27A1Q8IZC6 1860 aaPredicted RBP14.84□□□□□ -0.03
UBE2D3-228ENST00000508974 ITPR1Q14643 2758 aa14.84□□□□□ -0.03
UBE2D3-228ENST00000508974 TMEM202A6NGA9 273 aa14.84□□□□□ -0.03
UBE2D3-228ENST00000508974 NPIPB15A6NHN6 443 aaPredicted RBP14.84□□□□□ -0.03
UBE2D3-228ENST00000508974 TOR1BO14657 336 aa14.84□□□□□ -0.03
UBE2D3-228ENST00000508974 CASC3O15234 703 aaKnown RBP14.84□□□□□ -0.03
UBE2D3-228ENST00000508974 YY2O15391 372 aa14.84□□□□□ -0.03
UBE2D3-228ENST00000508974 RASGRP1O95267 797 aa14.84□□□□□ -0.03
UBE2D3-228ENST00000508974 PGLSO95336 258 aa14.84□□□□□ -0.03
UBE2D3-228ENST00000508974 KRT1P04264 644 aa14.84□□□□□ -0.03
UBE2D3-228ENST00000508974 PDHA1P08559 390 aa14.84□□□□□ -0.03
UBE2D3-228ENST00000508974 LHCGRP22888 699 aa14.84□□□□□ -0.03
UBE2D3-228ENST00000508974 KDELR1P24390 212 aa14.84□□□□□ -0.03
UBE2D3-228ENST00000508974 ETV3P41162 512 aa14.84□□□□□ -0.03
UBE2D3-228ENST00000508974 SLC10A2Q12908 348 aaPredicted RBP14.84□□□□□ -0.03
UBE2D3-228ENST00000508974 TBX2Q13207 712 aaPredicted RBP14.84□□□□□ -0.03
UBE2D3-228ENST00000508974 AGERQ15109 404 aa14.84□□□□□ -0.03
UBE2D3-228ENST00000508974 NR0B2Q15466 257 aa14.84□□□□□ -0.03
UBE2D3-228ENST00000508974 IFI16Q16666 785 aaKnown RBP14.84□□□□□ -0.03
UBE2D3-228ENST00000508974 HSD11B1LQ7Z5J1 315 aa14.84□□□□□ -0.03
UBE2D3-228ENST00000508974 SLC35F3Q8IY50 421 aa14.84□□□□□ -0.03
UBE2D3-228ENST00000508974 TEX26Q8N6G2 289 aa14.84□□□□□ -0.03
UBE2D3-228ENST00000508974 OR1E3Q8WZA6 343 aa14.84□□□□□ -0.03
UBE2D3-228ENST00000508974 LGR4Q9BXB1 951 aa14.84□□□□□ -0.03
UBE2D3-228ENST00000508974 FGF22Q9HCT0 170 aa14.84□□□□□ -0.03
UBE2D3-228ENST00000508974 RBM22Q9NW64 420 aaKnown RBP eCLIP14.84□□□□□ -0.03
UBE2D3-228ENST00000508974 LCMT1Q9UIC8 334 aa14.84□□□□□ -0.03
UBE2D3-228ENST00000508974 PHTF1Q9UMS5 762 aa14.84□□□□□ -0.03
UBE2D3-228ENST00000508974 HEY1Q9Y5J3 304 aa14.84□□□□□ -0.03
UBE2D3-228ENST00000508974 RAI2Q9Y5P3 530 aa14.84□□□□□ -0.03
UBE2D3-228ENST00000508974 APC2O95996 2303 aa14.83□□□□□ -0.03
UBE2D3-228ENST00000508974 NBEAQ8NFP9 2946 aa14.83□□□□□ -0.03
UBE2D3-228ENST00000508974 CFAP69A5D8W1 941 aa14.83□□□□□ -0.04
UBE2D3-228ENST00000508974 LMO7DNF2Z398 122 aa14.83□□□□□ -0.04
UBE2D3-228ENST00000508974 CACNB4O00305 520 aaPredicted RBP14.83□□□□□ -0.04
UBE2D3-228ENST00000508974 MATN3O15232 486 aa14.83□□□□□ -0.04
UBE2D3-228ENST00000508974 HEXIM1O94992 359 aaKnown RBP14.83□□□□□ -0.04
UBE2D3-228ENST00000508974 HLA-DQB2P05538 268 aa14.83□□□□□ -0.04
UBE2D3-228ENST00000508974 CYP2A6P11509 494 aaPredicted RBP14.83□□□□□ -0.04
UBE2D3-228ENST00000508974 CCNB1P14635 433 aa14.83□□□□□ -0.04
UBE2D3-228ENST00000508974 TGM2P21980 687 aa14.83□□□□□ -0.04
UBE2D3-228ENST00000508974 BLKP51451 505 aa14.83□□□□□ -0.04
UBE2D3-228ENST00000508974 EPHB1P54762 984 aa14.83□□□□□ -0.04
UBE2D3-228ENST00000508974 DYNLT1P63172 113 aa14.83□□□□□ -0.04
UBE2D3-228ENST00000508974 ARHGEF7Q14155 803 aa14.83□□□□□ -0.04
UBE2D3-228ENST00000508974 ELOCQ15369 112 aa14.83□□□□□ -0.04
UBE2D3-228ENST00000508974 PERM1Q5SV97 790 aa14.83□□□□□ -0.04
UBE2D3-228ENST00000508974 C6orf132Q5T0Z8 1188 aa14.83□□□□□ -0.04
UBE2D3-228ENST00000508974 TIGD7Q6NT04 549 aaPredicted RBP14.83□□□□□ -0.04
UBE2D3-228ENST00000508974 NPNTQ6UXI9 565 aa14.83□□□□□ -0.04
UBE2D3-228ENST00000508974 B4GALNT4Q76KP1 1039 aa14.83□□□□□ -0.04
UBE2D3-228ENST00000508974 LRRC49Q8IUZ0 686 aa14.83□□□□□ -0.04
UBE2D3-228ENST00000508974 RHOT2Q8IXI1 618 aa14.83□□□□□ -0.04
UBE2D3-228ENST00000508974 DCBLD1Q8N8Z6 715 aa14.83□□□□□ -0.04
UBE2D3-228ENST00000508974 OR56A4Q8NGH8 313 aa14.83□□□□□ -0.04
UBE2D3-228ENST00000508974 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.83□□□□□ -0.04
UBE2D3-228ENST00000508974 HNRNPLLQ8WVV9 542 aaKnown RBP14.83□□□□□ -0.04
UBE2D3-228ENST00000508974 RFFLQ8WZ73 363 aa14.83□□□□□ -0.04
UBE2D3-228ENST00000508974 RNF25Q96BH1 459 aaPredicted RBP14.83□□□□□ -0.04
UBE2D3-228ENST00000508974 FAF2Q96CS3 445 aa14.83□□□□□ -0.04
UBE2D3-228ENST00000508974 COQ10AQ96MF6 247 aa14.83□□□□□ -0.04
UBE2D3-228ENST00000508974 RNF157Q96PX1 679 aa14.83□□□□□ -0.04
UBE2D3-228ENST00000508974 LGMNQ99538 433 aa14.83□□□□□ -0.04
UBE2D3-228ENST00000508974 BOCQ9BWV1 1114 aa14.83□□□□□ -0.04
UBE2D3-228ENST00000508974 CEP41Q9BYV8 373 aa14.83□□□□□ -0.04
UBE2D3-228ENST00000508974 WDR26Q9H7D7 661 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms