RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 OR1E3Q8WZA6 343 aa16.27■□□□□ 0.2
LMNA-222ENST00000508500 FGF11Q92914 225 aa16.27■□□□□ 0.2
LMNA-222ENST00000508500 COQ10AQ96MF6 247 aa16.27■□□□□ 0.2
LMNA-222ENST00000508500 WDR92Q96MX6 357 aa16.27■□□□□ 0.2
LMNA-222ENST00000508500 PACSIN1Q9BY11 444 aa16.27■□□□□ 0.2
LMNA-222ENST00000508500 XPO4Q9C0E2 1151 aaKnown RBP16.27■□□□□ 0.2
LMNA-222ENST00000508500 ABCG4Q9H172 646 aa16.27■□□□□ 0.2
LMNA-222ENST00000508500 FGF22Q9HCT0 170 aa16.27■□□□□ 0.2
LMNA-222ENST00000508500 MRPL40Q9NQ50 206 aaKnown RBP16.27■□□□□ 0.2
LMNA-222ENST00000508500 PADI4Q9UM07 663 aa16.27■□□□□ 0.2
LMNA-222ENST00000508500 ENTPD2Q9Y5L3 495 aa16.27■□□□□ 0.2
LMNA-222ENST00000508500 RAI2Q9Y5P3 530 aa16.27■□□□□ 0.2
LMNA-222ENST00000508500 A0A0U1RQS6 177 aa16.26■□□□□ 0.19
LMNA-222ENST00000508500 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.26■□□□□ 0.19
LMNA-222ENST00000508500 SOCS5O75159 536 aa16.26■□□□□ 0.19
LMNA-222ENST00000508500 ELFN1P0C7U0 828 aa16.26■□□□□ 0.19
LMNA-222ENST00000508500 ABCG1P45844 678 aa16.26■□□□□ 0.19
LMNA-222ENST00000508500 BLKP51451 505 aa16.26■□□□□ 0.19
LMNA-222ENST00000508500 CDH6P55285 790 aa16.26■□□□□ 0.19
LMNA-222ENST00000508500 TAS2R40P59535 323 aa16.26■□□□□ 0.19
LMNA-222ENST00000508500 KIAA1024LP59773 190 aa16.26■□□□□ 0.19
LMNA-222ENST00000508500 POLR2LP62875 67 aaKnown RBP16.26■□□□□ 0.19
LMNA-222ENST00000508500 GABREP78334 506 aa16.26■□□□□ 0.19
LMNA-222ENST00000508500 DPYSL3Q14195 570 aa16.26■□□□□ 0.19
LMNA-222ENST00000508500 ZNF235Q14590 738 aa16.26■□□□□ 0.19
LMNA-222ENST00000508500 ASTE1Q2TB18 679 aaPredicted RBP16.26■□□□□ 0.19
LMNA-222ENST00000508500 ESRP1Q6NXG1 681 aaKnown RBP16.26■□□□□ 0.19
LMNA-222ENST00000508500 FSTL5Q8N475 847 aaPredicted RBP16.26■□□□□ 0.19
LMNA-222ENST00000508500 KYQ8NBH2 561 aa16.26■□□□□ 0.19
LMNA-222ENST00000508500 PRR11Q96HE9 360 aaPredicted RBP16.26■□□□□ 0.19
LMNA-222ENST00000508500 SMIM14Q96QK8 99 aa16.26■□□□□ 0.19
LMNA-222ENST00000508500 UBL7Q96S82 380 aaPredicted RBP16.26■□□□□ 0.19
LMNA-222ENST00000508500 RBM15Q96T37 977 aaKnown RBP eCLIP16.26■□□□□ 0.193e-6■■■■□ 20.8
LMNA-222ENST00000508500 EVA1BQ9NVM1 165 aa16.26■□□□□ 0.19
LMNA-222ENST00000508500 NCKIPSDQ9NZQ3 722 aa16.26■□□□□ 0.19
LMNA-222ENST00000508500 KLQ9UEF7 1012 aa16.26■□□□□ 0.19
LMNA-222ENST00000508500 DGKBQ9Y6T7 804 aa16.26■□□□□ 0.19
LMNA-222ENST00000508500 ASH1LQ9NR48 2969 aaKnown RBP16.26■□□□□ 0.19
LMNA-222ENST00000508500 MYO1FO00160 1098 aa16.25■□□□□ 0.19
LMNA-222ENST00000508500 MFSD11O43934 449 aa16.25■□□□□ 0.19
LMNA-222ENST00000508500 DXOO77932 396 aaKnown RBP16.25■□□□□ 0.19
LMNA-222ENST00000508500 MAP3K6O95382 1288 aa16.25■□□□□ 0.19
LMNA-222ENST00000508500 FUCA1P04066 466 aa16.25■□□□□ 0.19
LMNA-222ENST00000508500 CTSEP14091 401 aa16.25■□□□□ 0.19
LMNA-222ENST00000508500 LHCGRP22888 699 aa16.25■□□□□ 0.19
LMNA-222ENST00000508500 HTR1BP28222 390 aa16.25■□□□□ 0.19
LMNA-222ENST00000508500 ACTN2P35609 894 aa16.25■□□□□ 0.19
LMNA-222ENST00000508500 HSPA9P38646 679 aaKnown RBP16.25■□□□□ 0.19
LMNA-222ENST00000508500 LSSP48449 732 aa16.25■□□□□ 0.19
LMNA-222ENST00000508500 ACOX1Q15067 660 aa16.25■□□□□ 0.19
LMNA-222ENST00000508500 ELOCQ15369 112 aa16.25■□□□□ 0.19
LMNA-222ENST00000508500 NCBP2-AS2Q69YL0 99 aa16.25■□□□□ 0.19
LMNA-222ENST00000508500 PNCKQ6P2M8 343 aa16.25■□□□□ 0.19
LMNA-222ENST00000508500 ATPAF2Q8N5M1 289 aa16.25■□□□□ 0.19
LMNA-222ENST00000508500 TEX26Q8N6G2 289 aa16.25■□□□□ 0.19
LMNA-222ENST00000508500 RNF214Q8ND24 703 aa16.25■□□□□ 0.19
LMNA-222ENST00000508500 CCL4L1Q8NHW4 92 aa16.25■□□□□ 0.19
LMNA-222ENST00000508500 ZNF564Q8TBZ8 553 aaPredicted RBP16.25■□□□□ 0.19
LMNA-222ENST00000508500 PDCD6IPQ8WUM4 868 aaKnown RBP16.25■□□□□ 0.19
LMNA-222ENST00000508500 IQCDQ96DY2 449 aa16.25■□□□□ 0.19
LMNA-222ENST00000508500 ATXN7L3BQ96GX2 97 aa16.25■□□□□ 0.19
LMNA-222ENST00000508500 HIC2Q96JB3 615 aa16.25■□□□□ 0.19
LMNA-222ENST00000508500 CCDC3Q9BQI4 270 aa16.25■□□□□ 0.19
LMNA-222ENST00000508500 POLR1BQ9H9Y6 1135 aa16.25■□□□□ 0.19
LMNA-222ENST00000508500 ASCL3Q9NQ33 180 aa16.25■□□□□ 0.19
LMNA-222ENST00000508500 SIRPGQ9P1W8 387 aa16.25■□□□□ 0.19
LMNA-222ENST00000508500 GULP1Q9UBP9 304 aa16.25■□□□□ 0.19
LMNA-222ENST00000508500 SATB2Q9UPW6 733 aa16.25■□□□□ 0.19
LMNA-222ENST00000508500 NPIPB15A6NHN6 443 aaPredicted RBP16.24■□□□□ 0.19
LMNA-222ENST00000508500 TK2O00142 265 aa16.24■□□□□ 0.19
LMNA-222ENST00000508500 NTN3O00634 580 aaPredicted RBP16.24■□□□□ 0.19
LMNA-222ENST00000508500 ATXN7O15265 892 aaPredicted RBP16.24■□□□□ 0.19
LMNA-222ENST00000508500 FZD6O60353 706 aa16.24■□□□□ 0.19
LMNA-222ENST00000508500 HEXIM1O94992 359 aaKnown RBP16.24■□□□□ 0.19
LMNA-222ENST00000508500 PGLSO95336 258 aa16.24■□□□□ 0.19
LMNA-222ENST00000508500 CPP00450 1065 aa16.24■□□□□ 0.19
LMNA-222ENST00000508500 TNFP01375 233 aa16.24■□□□□ 0.19
LMNA-222ENST00000508500 PDHA1P08559 390 aa16.24■□□□□ 0.19
LMNA-222ENST00000508500 HOXC4P09017 264 aaPredicted RBP16.24■□□□□ 0.19
LMNA-222ENST00000508500 ALPIP09923 528 aa16.24■□□□□ 0.19
LMNA-222ENST00000508500 DEKP35659 375 aaKnown RBP16.24■□□□□ 0.19
LMNA-222ENST00000508500 MMP13P45452 471 aa16.24■□□□□ 0.19
LMNA-222ENST00000508500 RPIAP49247 311 aa16.24■□□□□ 0.19
LMNA-222ENST00000508500 CCDC173Q0VFZ6 552 aa16.24■□□□□ 0.19
LMNA-222ENST00000508500 KRT81Q14533 505 aa16.24■□□□□ 0.19
LMNA-222ENST00000508500 PAFAH1B3Q15102 231 aaKnown RBP16.24■□□□□ 0.19
LMNA-222ENST00000508500 MARC1Q5VT66 337 aa16.24■□□□□ 0.19
LMNA-222ENST00000508500 LVRNQ6Q4G3 990 aa16.24■□□□□ 0.19
LMNA-222ENST00000508500 HSD11B1LQ7Z5J1 315 aa16.24■□□□□ 0.19
LMNA-222ENST00000508500 TSPAN33Q86UF1 283 aa16.24■□□□□ 0.19
LMNA-222ENST00000508500 ARL10Q8N8L6 244 aa16.24■□□□□ 0.19
LMNA-222ENST00000508500 GPR156Q8NFN8 814 aa16.24■□□□□ 0.19
LMNA-222ENST00000508500 OR56A4Q8NGH8 313 aa16.24■□□□□ 0.19
LMNA-222ENST00000508500 LRRN4Q8WUT4 740 aa16.24■□□□□ 0.19
LMNA-222ENST00000508500 PTCD2Q8WV60 388 aaKnown RBP16.24■□□□□ 0.19
LMNA-222ENST00000508500 PIH1D2Q8WWB5 315 aa16.24■□□□□ 0.19
LMNA-222ENST00000508500 GLMNQ92990 594 aa16.24■□□□□ 0.19
LMNA-222ENST00000508500 TMEM168Q9H0V1 697 aa16.24■□□□□ 0.19
LMNA-222ENST00000508500 RCOR3Q9P2K3 495 aaPredicted RBP16.24■□□□□ 0.19
LMNA-222ENST00000508500 PHTF1Q9UMS5 762 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms