RNA–Protein interactions for RNA: ENST00000507653.1

AC008539.1-201, humanhuman

TSL 3 BASIC

Gene AC008539.1, Length 482 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008539.1-201ENST00000507653 ZNF718Q3SXZ3 478 aa3.11□□□□□ -1.91
AC008539.1-201ENST00000507653 ATP13A5Q4VNC0 1218 aa3.11□□□□□ -1.91
AC008539.1-201ENST00000507653 METTL2BQ6P1Q9 378 aaKnown RBP3.11□□□□□ -1.91
AC008539.1-201ENST00000507653 ZC3HC1Q86WB0 502 aaKnown RBP3.11□□□□□ -1.91
AC008539.1-201ENST00000507653 CHERPQ8IWX8 916 aaKnown RBP3.11□□□□□ -1.91
AC008539.1-201ENST00000507653 PGBD5Q8N414 524 aa3.11□□□□□ -1.91
AC008539.1-201ENST00000507653 LNX1Q8TBB1 728 aaPredicted RBP3.11□□□□□ -1.91
AC008539.1-201ENST00000507653 ZC3HAV1LQ96H79 300 aaKnown RBP3.11□□□□□ -1.91
AC008539.1-201ENST00000507653 METTL2AQ96IZ6 378 aaKnown RBP3.11□□□□□ -1.91
AC008539.1-201ENST00000507653 SLC41A2Q96JW4 573 aa3.11□□□□□ -1.91
AC008539.1-201ENST00000507653 OR1F2PQ96R84 312 aa3.11□□□□□ -1.91
AC008539.1-201ENST00000507653 NR1H4Q96RI1 486 aaPredicted RBP3.11□□□□□ -1.91
AC008539.1-201ENST00000507653 ESRP2Q9H6T0 727 aaKnown RBP3.11□□□□□ -1.91
AC008539.1-201ENST00000507653 UBTD1Q9HAC8 227 aa3.11□□□□□ -1.91
AC008539.1-201ENST00000507653 TCF7L2Q9NQB0 619 aa3.11□□□□□ -1.91
AC008539.1-201ENST00000507653 DDX4Q9NQI0 724 aaKnown RBP3.11□□□□□ -1.91
AC008539.1-201ENST00000507653 RRN3Q9NYV6 651 aa3.11□□□□□ -1.91
AC008539.1-201ENST00000507653 GGA3Q9NZ52 723 aa3.11□□□□□ -1.91
AC008539.1-201ENST00000507653 ZNF224Q9NZL3 707 aa3.11□□□□□ -1.91
AC008539.1-201ENST00000507653 A4GNTQ9UNA3 340 aa3.11□□□□□ -1.91
AC008539.1-201ENST00000507653 SCINQ9Y6U3 715 aa3.11□□□□□ -1.91
AC008539.1-201ENST00000507653 KDM3AQ9Y4C1 1321 aa3.11□□□□□ -1.91
AC008539.1-201ENST00000507653 SCN5AQ14524 2016 aa3.1□□□□□ -1.91
AC008539.1-201ENST00000507653 PLEKHD1A6NEE1 506 aa3.1□□□□□ -1.91
AC008539.1-201ENST00000507653 AKR1B15C9JRZ8 316 aaPredicted RBP3.1□□□□□ -1.91
AC008539.1-201ENST00000507653 TNPO2O14787 897 aaKnown RBP3.1□□□□□ -1.91
AC008539.1-201ENST00000507653 TNFSF14O43557 240 aa3.1□□□□□ -1.91
AC008539.1-201ENST00000507653 TACC1O75410 805 aa3.1□□□□□ -1.91
AC008539.1-201ENST00000507653 PMS2P2O95744 297 aa3.1□□□□□ -1.91
AC008539.1-201ENST00000507653 CGAP01215 116 aa3.1□□□□□ -1.91
AC008539.1-201ENST00000507653 POLBP06746 335 aa3.1□□□□□ -1.91
AC008539.1-201ENST00000507653 LINC00271P0C7V0 271 aa3.1□□□□□ -1.91
AC008539.1-201ENST00000507653 ANOS1P23352 680 aa3.1□□□□□ -1.91
AC008539.1-201ENST00000507653 RRM1P23921 792 aa3.1□□□□□ -1.91
AC008539.1-201ENST00000507653 CDAP32320 146 aa3.1□□□□□ -1.91
AC008539.1-201ENST00000507653 STX2P32856 288 aa3.1□□□□□ -1.91
AC008539.1-201ENST00000507653 SHMT1P34896 483 aa3.1□□□□□ -1.91
AC008539.1-201ENST00000507653 METAP2P50579 478 aaKnown RBP eCLIP3.1□□□□□ -1.91
AC008539.1-201ENST00000507653 EFNA5P52803 228 aa3.1□□□□□ -1.91
AC008539.1-201ENST00000507653 EIF3BP55884 814 aaKnown RBP3.1□□□□□ -1.91
AC008539.1-201ENST00000507653 RPP30P78346 268 aaKnown RBP3.1□□□□□ -1.91
AC008539.1-201ENST00000507653 ZNF155Q12901 538 aaPredicted RBP3.1□□□□□ -1.91
AC008539.1-201ENST00000507653 TNFAIP1Q13829 316 aa3.1□□□□□ -1.91
AC008539.1-201ENST00000507653 VEPH1Q14D04 833 aa3.1□□□□□ -1.91
AC008539.1-201ENST00000507653 USP41Q3LFD5 358 aa3.1□□□□□ -1.91
AC008539.1-201ENST00000507653 RHBDF2Q6PJF5 856 aa3.1□□□□□ -1.91
AC008539.1-201ENST00000507653 GPAT4Q86UL3 456 aa3.1□□□□□ -1.91
AC008539.1-201ENST00000507653 ARMC8Q8IUR7 673 aa3.1□□□□□ -1.91
AC008539.1-201ENST00000507653 LURAP1LQ8IV03 231 aa3.1□□□□□ -1.91
AC008539.1-201ENST00000507653 WDR63Q8IWG1 891 aa3.1□□□□□ -1.91
AC008539.1-201ENST00000507653 HVCN1Q96D96 273 aa3.1□□□□□ -1.91
AC008539.1-201ENST00000507653 MTBPQ96DY7 904 aa3.1□□□□□ -1.91
AC008539.1-201ENST00000507653 IL17FQ96PD4 163 aa3.1□□□□□ -1.91
AC008539.1-201ENST00000507653 SIN3AQ96ST3 1273 aa3.1□□□□□ -1.91
AC008539.1-201ENST00000507653 PKP4Q99569 1192 aa3.1□□□□□ -1.91
AC008539.1-201ENST00000507653 SPRY4Q9C004 299 aa3.1□□□□□ -1.91
AC008539.1-201ENST00000507653 RANBP17Q9H2T7 1088 aaKnown RBP3.1□□□□□ -1.91
AC008539.1-201ENST00000507653 PRKRIP1Q9H875 184 aaPredicted RBP3.1□□□□□ -1.91
AC008539.1-201ENST00000507653 JMJD4Q9H9V9 463 aa3.1□□□□□ -1.91
AC008539.1-201ENST00000507653 MAGEE1Q9HCI5 957 aa3.1□□□□□ -1.91
AC008539.1-201ENST00000507653 OCIAD1Q9NX40 245 aa3.1□□□□□ -1.91
AC008539.1-201ENST00000507653 CISD1Q9NZ45 108 aaKnown RBP3.1□□□□□ -1.91
AC008539.1-201ENST00000507653 SIX4Q9UIU6 781 aa3.1□□□□□ -1.91
AC008539.1-201ENST00000507653 SARDHQ9UL12 918 aa3.1□□□□□ -1.91
AC008539.1-201ENST00000507653 CDC14AQ9UNH5 594 aa3.1□□□□□ -1.91
AC008539.1-201ENST00000507653 FAM96BQ9Y3D0 163 aa3.1□□□□□ -1.91
AC008539.1-201ENST00000507653 DOCK7Q96N67 2140 aa3.1□□□□□ -1.91
AC008539.1-201ENST00000507653 IGHV4OR15-8A0A075B7B6 117 aa3.09□□□□□ -1.91
AC008539.1-201ENST00000507653 TEX13CA0A0J9YWL9 993 aa3.09□□□□□ -1.91
AC008539.1-201ENST00000507653 A0A1W2PRG0 241 aa3.09□□□□□ -1.91
AC008539.1-201ENST00000507653 TMEM202A6NGA9 273 aa3.09□□□□□ -1.91
AC008539.1-201ENST00000507653 USP17L23D6RBM5 183 aa3.09□□□□□ -1.91
AC008539.1-201ENST00000507653 PLRG1O43660 514 aaKnown RBP3.09□□□□□ -1.91
AC008539.1-201ENST00000507653 BUB3O43684 328 aa3.09□□□□□ -1.91
AC008539.1-201ENST00000507653 ZIC3O60481 467 aa3.09□□□□□ -1.91
AC008539.1-201ENST00000507653 NDUFS7O75251 213 aa3.09□□□□□ -1.91
AC008539.1-201ENST00000507653 TMEM63AO94886 807 aa3.09□□□□□ -1.91
AC008539.1-201ENST00000507653 F7P08709 466 aaPredicted RBP3.09□□□□□ -1.91
AC008539.1-201ENST00000507653 DLX5P56178 289 aa3.09□□□□□ -1.91
AC008539.1-201ENST00000507653 EEF1A2Q05639 463 aaKnown RBP3.09□□□□□ -1.91
AC008539.1-201ENST00000507653 ACSM2AQ08AH3 577 aa3.09□□□□□ -1.91
AC008539.1-201ENST00000507653 GALNT2Q10471 571 aa3.09□□□□□ -1.91
AC008539.1-201ENST00000507653 ITGADQ13349 1161 aa3.09□□□□□ -1.91
AC008539.1-201ENST00000507653 SF3B4Q15427 424 aaKnown RBP eCLIP3.09□□□□□ -1.91
AC008539.1-201ENST00000507653 GSTA3Q16772 222 aa3.09□□□□□ -1.91
AC008539.1-201ENST00000507653 C6orf141Q5SZD1 244 aa3.09□□□□□ -1.91
AC008539.1-201ENST00000507653 INTS11Q5TA45 600 aaKnown RBP3.09□□□□□ -1.91
AC008539.1-201ENST00000507653 CES5AQ6NT32 575 aa3.09□□□□□ -1.91
AC008539.1-201ENST00000507653 ANKRD54Q6NXT1 300 aa3.09□□□□□ -1.91
AC008539.1-201ENST00000507653 TUBA1AQ71U36 451 aa3.09□□□□□ -1.91
AC008539.1-201ENST00000507653 ST8SIA4Q92187 359 aa3.09□□□□□ -1.91
AC008539.1-201ENST00000507653 ERGIC1Q969X5 290 aa3.09□□□□□ -1.91
AC008539.1-201ENST00000507653 KLHL29Q96CT2 875 aa3.09□□□□□ -1.91
AC008539.1-201ENST00000507653 RNF125Q96EQ8 232 aa3.09□□□□□ -1.91
AC008539.1-201ENST00000507653 SAAL1Q96ER3 474 aa3.09□□□□□ -1.91
AC008539.1-201ENST00000507653 TUBA1CQ9BQE3 449 aa3.09□□□□□ -1.91
AC008539.1-201ENST00000507653 HAUS8Q9BT25 410 aa3.09□□□□□ -1.91
AC008539.1-201ENST00000507653 AGXT2Q9BYV1 514 aa3.09□□□□□ -1.91
AC008539.1-201ENST00000507653 GLIS2Q9BZE0 524 aaPredicted RBP3.09□□□□□ -1.91
AC008539.1-201ENST00000507653 LTB4R2Q9NPC1 389 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms