RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 LRFN1Q9P244 771 aa3.35□□□□□ -1.87
TCOF1-208ENST00000506063 LNPEPQ9UIQ6 1025 aa3.35□□□□□ -1.87
TCOF1-208ENST00000506063 ODF2LQ9ULJ1 636 aa3.35□□□□□ -1.87
TCOF1-208ENST00000506063 FARSAQ9Y285 508 aaKnown RBP3.35□□□□□ -1.87
TCOF1-208ENST00000506063 MEMO1Q9Y316 297 aa3.35□□□□□ -1.87
TCOF1-208ENST00000506063 FARP1Q9Y4F1 1045 aaPredicted RBP3.35□□□□□ -1.87
TCOF1-208ENST00000506063 CEP83Q9Y592 693 aa3.35□□□□□ -1.87
TCOF1-208ENST00000506063 FHOD1Q9Y613 1164 aa3.35□□□□□ -1.87
TCOF1-208ENST00000506063 CYP46A1Q9Y6A2 500 aa3.35□□□□□ -1.87
TCOF1-208ENST00000506063 RAI1Q7Z5J4 1906 aaPredicted RBP3.34□□□□□ -1.87
TCOF1-208ENST00000506063 DSCAMO60469 2012 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 TRIM64A6NGJ6 449 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 TRIM64BA6NI03 449 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 YJEFN3A6XGL0 299 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 TMEM110-MUSTN1A8MSY1 372 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 FOXO6A8MYZ6 492 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 E7ENQ6 273 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 TULP2O00295 520 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 SNAP91O60641 907 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 SLC19A2O60779 497 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 EIF5BO60841 1220 aaKnown RBP3.34□□□□□ -1.87
TCOF1-208ENST00000506063 MMP20O60882 483 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 CDC45O75419 566 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 MOCS3O95396 460 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 EML2O95834 649 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 IGHDP01880 384 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 C9P02748 559 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 CCNYL3P0C7X3 344 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 ZNF18P17022 549 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 RRM1P23921 792 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 DDIT3P35638 169 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 CASP5P51878 434 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 GFERP55789 205 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 TNNC1P63316 161 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 SRSF2Q01130 221 aaKnown RBP3.34□□□□□ -1.87
TCOF1-208ENST00000506063 CCDC15Q0P6D6 951 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 CDC16Q13042 620 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 CBLBQ13191 982 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 GPS2Q13227 327 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 SLC12A1Q13621 1099 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 POSTNQ15063 836 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 ZNF174Q15697 407 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 DUOXA2Q1HG44 320 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.34□□□□□ -1.87
TCOF1-208ENST00000506063 KLHL40Q2TBA0 621 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 TMEM119Q4V9L6 283 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 LRRC73Q5JTD7 316 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 ARTNQ5T4W7 220 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 SHEQ5VZ18 495 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 CES4AQ5XG92 561 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 PWWP2BQ6NUJ5 590 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 FAM180AQ6UWF9 173 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 FAM198BQ6UWH4 519 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 TMEM207Q6UWW9 146 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 ZNF720Q7Z2F6 126 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 TECPR1Q7Z6L1 1165 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 MRGPREQ86SM8 312 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 PIGZQ86VD9 579 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 CDC20BQ86Y33 519 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 CBWD2Q8IUF1 395 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 TMEM151BQ8IW70 566 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 CHERPQ8IWX8 916 aaKnown RBP3.34□□□□□ -1.87
TCOF1-208ENST00000506063 CCAR2Q8N163 923 aaKnown RBP3.34□□□□□ -1.87
TCOF1-208ENST00000506063 GALNT16Q8N428 558 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 CPSF7Q8N684 471 aaKnown RBP3.34□□□□□ -1.87
TCOF1-208ENST00000506063 MYCT1Q8N699 235 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 PLA2G15Q8NCC3 412 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 C3orf20Q8ND61 904 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 ACRBPQ8NEB7 543 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 ARMC2Q8NEN0 867 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 OR56A4Q8NGH8 313 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 ROBO4Q8WZ75 1007 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 EDEM1Q92611 657 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 CYFIP2Q96F07 1278 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 RMND5BQ96G75 393 aaPredicted RBP3.34□□□□□ -1.87
TCOF1-208ENST00000506063 SLC39A13Q96H72 371 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 ELMO2Q96JJ3 720 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 PRMT1Q99873 361 aaKnown RBP3.34□□□□□ -1.87
TCOF1-208ENST00000506063 GPATCH1Q9BRR8 931 aaKnown RBP3.34□□□□□ -1.87
TCOF1-208ENST00000506063 LGR4Q9BXB1 951 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 POLDIP3Q9BY77 421 aaKnown RBP3.34□□□□□ -1.87
TCOF1-208ENST00000506063 DUSP16Q9BY84 665 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 FGFBP2Q9BYJ0 223 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 TNKS2Q9H2K2 1166 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 ZSCAN16Q9H4T2 348 aaPredicted RBP3.34□□□□□ -1.87
TCOF1-208ENST00000506063 PARVGQ9HBI0 331 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 DYRK4Q9NR20 520 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 RASSF1Q9NS23 344 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 OGFRQ9NZT2 677 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 IL17CQ9P0M4 197 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 IL36AQ9UHA7 158 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 TCFL5Q9UL49 500 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 G3BP2Q9UN86 482 aaKnown RBP3.34□□□□□ -1.87
TCOF1-208ENST00000506063 COQ6Q9Y2Z9 468 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 L3MBTL1Q9Y468 752 aa3.34□□□□□ -1.87
TCOF1-208ENST00000506063 ZNF407Q9C0G0 2248 aa3.34□□□□□ -1.88
TCOF1-208ENST00000506063 HYDINQ4G0P3 5121 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 NKX2-6A6NCS4 301 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 C16orf96A6NNT2 1141 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 PPP1R3GB7ZBB8 358 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms