RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 PLA2G16P53816 162 aa7.65□□□□□ -1.19
NEDD9-208ENST00000504387 FOXA1P55317 472 aa7.65□□□□□ -1.19
NEDD9-208ENST00000504387 TMEM132DQ14C87 1099 aa7.65□□□□□ -1.19
NEDD9-208ENST00000504387 INSCQ1MX18 579 aa7.65□□□□□ -1.19
NEDD9-208ENST00000504387 DALRD3Q5D0E6 543 aaKnown RBP7.65□□□□□ -1.19
NEDD9-208ENST00000504387 SYPL2Q5VXT5 272 aa7.65□□□□□ -1.19
NEDD9-208ENST00000504387 VASH1Q7L8A9 365 aaPredicted RBP7.65□□□□□ -1.19
NEDD9-208ENST00000504387 MIER2Q8N344 545 aa7.65□□□□□ -1.19
NEDD9-208ENST00000504387 CHPT1Q8WUD6 406 aa7.65□□□□□ -1.19
NEDD9-208ENST00000504387 TMEM174Q8WUU8 243 aa7.65□□□□□ -1.19
NEDD9-208ENST00000504387 EDEM1Q92611 657 aa7.65□□□□□ -1.19
NEDD9-208ENST00000504387 MAGED4Q96JG8 741 aa7.65□□□□□ -1.19
NEDD9-208ENST00000504387 NSMCE3Q96MG7 304 aa7.65□□□□□ -1.19
NEDD9-208ENST00000504387 ALPK1Q96QP1 1244 aa7.65□□□□□ -1.19
NEDD9-208ENST00000504387 GMLQ99445 158 aa7.65□□□□□ -1.19
NEDD9-208ENST00000504387 ZNF670Q9BS34 389 aa7.65□□□□□ -1.19
NEDD9-208ENST00000504387 ALOXE3Q9BYJ1 711 aa7.65□□□□□ -1.19
NEDD9-208ENST00000504387 GBA2Q9HCG7 927 aaPredicted RBP7.65□□□□□ -1.19
NEDD9-208ENST00000504387 ZNHIT2Q9UHR6 403 aa7.65□□□□□ -1.19
NEDD9-208ENST00000504387 CPA4Q9UI42 421 aa7.65□□□□□ -1.19
NEDD9-208ENST00000504387 GIT1Q9Y2X7 761 aa7.65□□□□□ -1.19
NEDD9-208ENST00000504387 NUP214P35658 2090 aaPredicted RBP7.64□□□□□ -1.19
NEDD9-208ENST00000504387 M0R3G1 203 aa7.64□□□□□ -1.19
NEDD9-208ENST00000504387 EEF2KO00418 725 aaKnown RBP7.64□□□□□ -1.19
NEDD9-208ENST00000504387 KPNA4O00629 521 aaPredicted RBP7.64□□□□□ -1.19
NEDD9-208ENST00000504387 TNPO2O14787 897 aaKnown RBP7.64□□□□□ -1.19
NEDD9-208ENST00000504387 CABYRO75952 493 aa7.64□□□□□ -1.19
NEDD9-208ENST00000504387 FARP2O94887 1054 aaPredicted RBP7.64□□□□□ -1.19
NEDD9-208ENST00000504387 MFN2O95140 757 aa7.64□□□□□ -1.19
NEDD9-208ENST00000504387 DIO3P55073 304 aa7.64□□□□□ -1.19
NEDD9-208ENST00000504387 TUBA4AP68366 448 aa7.64□□□□□ -1.19
NEDD9-208ENST00000504387 NRG1Q02297 640 aaPredicted RBP7.64□□□□□ -1.19
NEDD9-208ENST00000504387 NSUN2Q08J23 767 aaKnown RBP eCLIP7.64□□□□□ -1.19
NEDD9-208ENST00000504387 ZBTB17Q13105 803 aa7.64□□□□□ -1.19
NEDD9-208ENST00000504387 INPP5AQ14642 412 aa7.64□□□□□ -1.19
NEDD9-208ENST00000504387 KCTD2Q14681 263 aa7.64□□□□□ -1.19
NEDD9-208ENST00000504387 ACAP2Q15057 778 aa7.64□□□□□ -1.19
NEDD9-208ENST00000504387 AAK1Q2M2I8 961 aa7.64□□□□□ -1.19
NEDD9-208ENST00000504387 DCLRE1AQ6PJP8 1040 aa7.64□□□□□ -1.19
NEDD9-208ENST00000504387 HFE2Q6ZVN8 426 aa7.64□□□□□ -1.19
NEDD9-208ENST00000504387 GALNT5Q7Z7M9 940 aa7.64□□□□□ -1.19
NEDD9-208ENST00000504387 PIM3Q86V86 326 aa7.64□□□□□ -1.19
NEDD9-208ENST00000504387 ZC3HC1Q86WB0 502 aaKnown RBP7.64□□□□□ -1.19
NEDD9-208ENST00000504387 GATAD2AQ86YP4 633 aa7.64□□□□□ -1.19
NEDD9-208ENST00000504387 DEPDC4Q8N2C3 294 aa7.64□□□□□ -1.19
NEDD9-208ENST00000504387 AGBL3Q8NEM8 1001 aa7.64□□□□□ -1.19
NEDD9-208ENST00000504387 RDM1Q8NG50 284 aa7.64□□□□□ -1.19
NEDD9-208ENST00000504387 OR6P1Q8NGX9 317 aa7.64□□□□□ -1.19
NEDD9-208ENST00000504387 NDNFQ8TB73 568 aa7.64□□□□□ -1.19
NEDD9-208ENST00000504387 SLC7A14Q8TBB6 771 aa7.64□□□□□ -1.19
NEDD9-208ENST00000504387 RDH11Q8TC12 318 aa7.64□□□□□ -1.19
NEDD9-208ENST00000504387 C18orf25Q96B23 403 aaPredicted RBP7.64□□□□□ -1.19
NEDD9-208ENST00000504387 SNX27Q96L92 541 aa7.64□□□□□ -1.19
NEDD9-208ENST00000504387 NSUN5Q96P11 429 aaKnown RBP7.64□□□□□ -1.19
NEDD9-208ENST00000504387 PCYT2Q99447 389 aa7.64□□□□□ -1.19
NEDD9-208ENST00000504387 FUNDC2Q9BWH2 189 aa7.64□□□□□ -1.19
NEDD9-208ENST00000504387 SPC25Q9HBM1 224 aa7.64□□□□□ -1.19
NEDD9-208ENST00000504387 SUCOQ9UBS9 1254 aaKnown RBP7.64□□□□□ -1.19
NEDD9-208ENST00000504387 PADI4Q9UM07 663 aa7.64□□□□□ -1.19
NEDD9-208ENST00000504387 TRAF6Q9Y4K3 522 aa7.64□□□□□ -1.19
NEDD9-208ENST00000504387 OR51F1A6NGY5 319 aa7.64□□□□□ -1.19
NEDD9-208ENST00000504387 GNGT2O14610 69 aa7.64□□□□□ -1.19
NEDD9-208ENST00000504387 ARPC2O15144 300 aa7.64□□□□□ -1.19
NEDD9-208ENST00000504387 BCAS1O75363 584 aaPredicted RBP7.64□□□□□ -1.19
NEDD9-208ENST00000504387 MPOP05164 745 aa7.64□□□□□ -1.19
NEDD9-208ENST00000504387 C8BP07358 591 aa7.64□□□□□ -1.19
NEDD9-208ENST00000504387 ALDOCP09972 364 aaKnown RBP7.64□□□□□ -1.19
NEDD9-208ENST00000504387 ERCC2P18074 760 aa7.64□□□□□ -1.19
NEDD9-208ENST00000504387 CAPN3P20807 821 aa7.64□□□□□ -1.19
NEDD9-208ENST00000504387 ADIGQ0VDE8 80 aa7.64□□□□□ -1.19
NEDD9-208ENST00000504387 NFYCQ13952 458 aa7.64□□□□□ -1.19
NEDD9-208ENST00000504387 SPANXN3Q5MJ09 141 aa7.64□□□□□ -1.19
NEDD9-208ENST00000504387 IER5Q5VY09 327 aa7.64□□□□□ -1.19
NEDD9-208ENST00000504387 STEAP4Q687X5 459 aa7.64□□□□□ -1.19
NEDD9-208ENST00000504387 ARHGAP36Q6ZRI8 547 aa7.64□□□□□ -1.19
NEDD9-208ENST00000504387 SPATC1Q76KD6 591 aa7.64□□□□□ -1.19
NEDD9-208ENST00000504387 PAGE2Q7Z2X7 111 aa7.64□□□□□ -1.19
NEDD9-208ENST00000504387 ADCK1Q86TW2 530 aa7.64□□□□□ -1.19
NEDD9-208ENST00000504387 FUNDC1Q8IVP5 155 aa7.64□□□□□ -1.19
NEDD9-208ENST00000504387 TMEM151AQ8N4L1 468 aa7.64□□□□□ -1.19
NEDD9-208ENST00000504387 SCAIQ8N9R8 606 aa7.64□□□□□ -1.19
NEDD9-208ENST00000504387 FBXO30Q8TB52 745 aa7.64□□□□□ -1.19
NEDD9-208ENST00000504387 APBB2Q92870 758 aa7.64□□□□□ -1.19
NEDD9-208ENST00000504387 RTP4Q96DX8 246 aa7.64□□□□□ -1.19
NEDD9-208ENST00000504387 DMRTB1Q96MA1 342 aa7.64□□□□□ -1.19
NEDD9-208ENST00000504387 ZMAT2Q96NC0 199 aaKnown RBP7.64□□□□□ -1.19
NEDD9-208ENST00000504387 CCDC68Q9H2F9 335 aa7.64□□□□□ -1.19
NEDD9-208ENST00000504387 GOLGA2P5Q9HBQ8 144 aa7.64□□□□□ -1.19
NEDD9-208ENST00000504387 DDX28Q9NUL7 540 aaKnown RBP7.64□□□□□ -1.19
NEDD9-208ENST00000504387 SMPD3Q9NY59 655 aaPredicted RBP7.64□□□□□ -1.19
NEDD9-208ENST00000504387 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.64□□□□□ -1.19
NEDD9-208ENST00000504387 TMEM98Q9Y2Y6 226 aa7.64□□□□□ -1.19
NEDD9-208ENST00000504387 CAB39Q9Y376 341 aaPredicted RBP7.64□□□□□ -1.19
NEDD9-208ENST00000504387 TCAF1Q9Y4C2 921 aa7.64□□□□□ -1.19
NEDD9-208ENST00000504387 SLX4Q8IY92 1834 aa7.64□□□□□ -1.19
NEDD9-208ENST00000504387 ZFC3H1O60293 1989 aaKnown RBP7.64□□□□□ -1.19
NEDD9-208ENST00000504387 TCRBV3S1A0A5B6 114 aa7.63□□□□□ -1.19
NEDD9-208ENST00000504387 TRIM24O15164 1050 aa7.63□□□□□ -1.19
NEDD9-208ENST00000504387 TBX1O43435 398 aa7.63□□□□□ -1.19
NEDD9-208ENST00000504387 TIMM44O43615 452 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms