RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 YWHAZP63104 245 aaKnown RBP6.27□□□□□ -1.41
CLCN3-204ENST00000504131 TGM3Q08188 693 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 RPA4Q13156 261 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 ZNF311Q5JNZ3 666 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 ARHGAP12Q8IWW6 846 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 OR8K5Q8NH50 307 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 SLC16A10Q8TF71 515 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 SELENOMQ8WWX9 145 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 AGAP2Q99490 1192 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 SLC12A5Q9H2X9 1139 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 ANKZF1Q9H8Y5 726 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 EFCAB1Q9HAE3 211 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 C19orf12Q9NSK7 152 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 DDX43Q9NXZ2 648 aaKnown RBP6.27□□□□□ -1.41
CLCN3-204ENST00000504131 DENND2AQ9ULE3 1009 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 GRIP1Q9Y3R0 1128 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 PCYT1BQ9Y5K3 369 aaPredicted RBP6.27□□□□□ -1.41
CLCN3-204ENST00000504131 SERTM2A0A1B0GWG4 89 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 SMCO3A2RU48 225 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 CAPNS1P04632 268 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 RNF224P0DH78 156 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 PRPS2P11908 318 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 UGT1A4P22310 534 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 MMP8P22894 467 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 UGT1A3P35503 534 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 UGT1A5P35504 534 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 GRIA1P42261 906 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 GRIA2P42262 883 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 MAGEA4P43358 317 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 MYL5Q02045 173 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 LIPEQ05469 1076 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 SRSF11Q05519 484 aaKnown RBP6.27□□□□□ -1.41
CLCN3-204ENST00000504131 CARD16Q5EG05 197 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 FAM45BPQ6NSW5 357 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 MSANTD1Q6ZTZ1 278 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 BRINP3Q76B58 766 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 ADGRG6Q86SQ4 1221 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 ZC3H7AQ8IWR0 971 aaKnown RBP6.27□□□□□ -1.41
CLCN3-204ENST00000504131 CFAP206Q8IYR0 622 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 OTUD7AQ8TE49 926 aaPredicted RBP6.27□□□□□ -1.41
CLCN3-204ENST00000504131 BSNDQ8WZ55 320 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 TXN2Q99757 166 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 SLC13A1Q9BZW2 595 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 B3GNT4Q9C0J1 378 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 TRIT1Q9H3H1 467 aaKnown RBP6.27□□□□□ -1.41
CLCN3-204ENST00000504131 TAS2R10Q9NYW0 307 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 ADAM22Q9P0K1 906 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 ICKQ9UPZ9 632 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 SOS2Q07890 1332 aaPredicted RBP6.27□□□□□ -1.41
CLCN3-204ENST00000504131 TGOLN2O43493 480 aa6.26□□□□□ -1.41
CLCN3-204ENST00000504131 CHP2O43745 196 aa6.26□□□□□ -1.41
CLCN3-204ENST00000504131 PSMG1O95456 288 aa6.26□□□□□ -1.41
CLCN3-204ENST00000504131 FGGP02679 453 aa6.26□□□□□ -1.41
CLCN3-204ENST00000504131 FHITP49789 147 aa6.26□□□□□ -1.41
CLCN3-204ENST00000504131 ENTPD1P49961 510 aa6.26□□□□□ -1.41
CLCN3-204ENST00000504131 LUMP51884 338 aaPredicted RBP6.26□□□□□ -1.41
CLCN3-204ENST00000504131 AP2S1P53680 142 aaPredicted RBP6.26□□□□□ -1.41
CLCN3-204ENST00000504131 ORC2Q13416 577 aaPredicted RBP6.26□□□□□ -1.41
CLCN3-204ENST00000504131 MBTPS1Q14703 1052 aa6.26□□□□□ -1.41
CLCN3-204ENST00000504131 AOC3Q16853 763 aa6.26□□□□□ -1.41
CLCN3-204ENST00000504131 PCGF3Q3KNV8 242 aa6.26□□□□□ -1.41
CLCN3-204ENST00000504131 SLC25A25Q6KCM7 469 aa6.26□□□□□ -1.41
CLCN3-204ENST00000504131 TRMT11Q7Z4G4 463 aaKnown RBP6.26□□□□□ -1.41
CLCN3-204ENST00000504131 PODNQ7Z5L7 613 aa6.26□□□□□ -1.41
CLCN3-204ENST00000504131 ZC3HC1Q86WB0 502 aaKnown RBP6.26□□□□□ -1.41
CLCN3-204ENST00000504131 RASAL3Q86YV0 1011 aa6.26□□□□□ -1.41
CLCN3-204ENST00000504131 CBWD2Q8IUF1 395 aa6.26□□□□□ -1.41
CLCN3-204ENST00000504131 CCDC105Q8IYK2 499 aa6.26□□□□□ -1.41
CLCN3-204ENST00000504131 UBQLNLQ8IYU4 475 aa6.26□□□□□ -1.41
CLCN3-204ENST00000504131 LINC00518Q8N0U6 118 aa6.26□□□□□ -1.41
CLCN3-204ENST00000504131 KLHL36Q8N4N3 616 aa6.26□□□□□ -1.41
CLCN3-204ENST00000504131 SLC24A4Q8NFF2 622 aa6.26□□□□□ -1.41
CLCN3-204ENST00000504131 DNAJB3Q8WWF6 145 aa6.26□□□□□ -1.41
CLCN3-204ENST00000504131 TOP1MTQ969P6 601 aa6.26□□□□□ -1.41
CLCN3-204ENST00000504131 NT5C1BQ96P26 610 aa6.26□□□□□ -1.41
CLCN3-204ENST00000504131 LRRC40Q9H9A6 602 aa6.26□□□□□ -1.41
CLCN3-204ENST00000504131 CNNM1Q9NRU3 951 aa6.26□□□□□ -1.41
CLCN3-204ENST00000504131 RASSF1Q9NS23 344 aa6.26□□□□□ -1.41
CLCN3-204ENST00000504131 SAMSN1Q9NSI8 373 aaKnown RBP6.26□□□□□ -1.41
CLCN3-204ENST00000504131 GSKIPQ9P0R6 139 aa6.26□□□□□ -1.41
CLCN3-204ENST00000504131 STOX2Q9P2F5 926 aaPredicted RBP6.26□□□□□ -1.41
CLCN3-204ENST00000504131 COPG2Q9UBF2 871 aa6.26□□□□□ -1.41
CLCN3-204ENST00000504131 PPARGC1AQ9UBK2 798 aaKnown RBP6.26□□□□□ -1.41
CLCN3-204ENST00000504131 EXTL2Q9UBQ6 330 aa6.26□□□□□ -1.41
CLCN3-204ENST00000504131 GTF2IRD1Q9UHL9 959 aa6.26□□□□□ -1.41
CLCN3-204ENST00000504131 NPFFR2Q9Y5X5 522 aa6.26□□□□□ -1.41
CLCN3-204ENST00000504131 MAU2Q9Y6X3 613 aa6.26□□□□□ -1.41
CLCN3-204ENST00000504131 LMTK2Q8IWU2 1503 aa6.26□□□□□ -1.41
CLCN3-204ENST00000504131 NOS1P29475 1434 aa6.26□□□□□ -1.41
CLCN3-204ENST00000504131 POM121BA6NF01 834 aa6.26□□□□□ -1.41
CLCN3-204ENST00000504131 SULT1C2O00338 296 aa6.26□□□□□ -1.41
CLCN3-204ENST00000504131 MED26O95402 600 aa6.26□□□□□ -1.41
CLCN3-204ENST00000504131 CYP2B6P20813 491 aa6.26□□□□□ -1.41
CLCN3-204ENST00000504131 SSTR3P32745 418 aaPredicted RBP6.26□□□□□ -1.41
CLCN3-204ENST00000504131 RAP1GAPP47736 663 aa6.26□□□□□ -1.41
CLCN3-204ENST00000504131 QARSP47897 775 aaKnown RBP6.26□□□□□ -1.41
CLCN3-204ENST00000504131 IL2P60568 153 aa6.26□□□□□ -1.41
CLCN3-204ENST00000504131 NR1H3Q13133 447 aa6.26□□□□□ -1.41
CLCN3-204ENST00000504131 PTGDRQ13258 359 aa6.26□□□□□ -1.41
CLCN3-204ENST00000504131 DDX39BQ13838 428 aaKnown RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms