RNA–Protein interactions for RNA: ENST00000503418.5

UBE2D3-215, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-215ENST00000503418 TBC1D25Q3MII6 688 aa19.5■□□□□ 0.71
UBE2D3-215ENST00000503418 KCTD16Q68DU8 428 aa19.5■□□□□ 0.71
UBE2D3-215ENST00000503418 GKN2Q86XP6 184 aa19.5■□□□□ 0.71
UBE2D3-215ENST00000503418 CPNE8Q86YQ8 564 aa19.5■□□□□ 0.71
UBE2D3-215ENST00000503418 ARL10Q8N8L6 244 aa19.5■□□□□ 0.71
UBE2D3-215ENST00000503418 KYQ8NBH2 561 aa19.5■□□□□ 0.71
UBE2D3-215ENST00000503418 TPCN2Q8NHX9 752 aa19.5■□□□□ 0.71
UBE2D3-215ENST00000503418 SNIP1Q8TAD8 396 aaKnown RBP19.5■□□□□ 0.71
UBE2D3-215ENST00000503418 FUBP1Q96AE4 644 aaKnown RBP19.5■□□□□ 0.71
UBE2D3-215ENST00000503418 CCDC3Q9BQI4 270 aa19.5■□□□□ 0.71
UBE2D3-215ENST00000503418 NT5MQ9NPB1 228 aa19.5■□□□□ 0.71
UBE2D3-215ENST00000503418 GPR34Q9UPC5 381 aa19.5■□□□□ 0.71
UBE2D3-215ENST00000503418 TMEM202A6NGA9 273 aa19.49■□□□□ 0.71
UBE2D3-215ENST00000503418 IL4RP24394 825 aa19.49■□□□□ 0.71
UBE2D3-215ENST00000503418 NFKBIAP25963 317 aa19.49■□□□□ 0.71
UBE2D3-215ENST00000503418 VIPR1P32241 457 aa19.49■□□□□ 0.71
UBE2D3-215ENST00000503418 KIAA1024LP59773 190 aa19.49■□□□□ 0.71
UBE2D3-215ENST00000503418 ITKQ08881 620 aa19.49■□□□□ 0.71
UBE2D3-215ENST00000503418 TRAF2Q12933 501 aa19.49■□□□□ 0.71
UBE2D3-215ENST00000503418 DPYSL3Q14195 570 aa19.49■□□□□ 0.71
UBE2D3-215ENST00000503418 CNGA3Q16281 694 aa19.49■□□□□ 0.71
UBE2D3-215ENST00000503418 ISXQ2M1V0 245 aa19.49■□□□□ 0.71
UBE2D3-215ENST00000503418 ATP13A4Q4VNC1 1196 aa19.49■□□□□ 0.71
UBE2D3-215ENST00000503418 LVRNQ6Q4G3 990 aa19.49■□□□□ 0.71
UBE2D3-215ENST00000503418 RBM44Q6ZP01 1051 aaKnown RBP19.49■□□□□ 0.71
UBE2D3-215ENST00000503418 KCTD6Q8NC69 237 aa19.49■□□□□ 0.71
UBE2D3-215ENST00000503418 OR56A4Q8NGH8 313 aa19.49■□□□□ 0.71
UBE2D3-215ENST00000503418 CTNNBL1Q8WYA6 563 aaPredicted RBP19.49■□□□□ 0.71
UBE2D3-215ENST00000503418 OR1E3Q8WZA6 343 aa19.49■□□□□ 0.71
UBE2D3-215ENST00000503418 NUS1Q96E22 293 aa19.49■□□□□ 0.71
UBE2D3-215ENST00000503418 PACSIN1Q9BY11 444 aa19.49■□□□□ 0.71
UBE2D3-215ENST00000503418 DEF6Q9H4E7 631 aa19.49■□□□□ 0.71
UBE2D3-215ENST00000503418 WDR26Q9H7D7 661 aa19.49■□□□□ 0.71
UBE2D3-215ENST00000503418 MRPL40Q9NQ50 206 aaKnown RBP19.49■□□□□ 0.71
UBE2D3-215ENST00000503418 MOSPD1Q9UJG1 213 aa19.49■□□□□ 0.71
UBE2D3-215ENST00000503418 PHTF1Q9UMS5 762 aa19.49■□□□□ 0.71
UBE2D3-215ENST00000503418 NENFQ9UMX5 172 aa19.49■□□□□ 0.71
UBE2D3-215ENST00000503418 MAP3K6O95382 1288 aa19.48■□□□□ 0.71
UBE2D3-215ENST00000503418 H2AFZP0C0S5 128 aa19.48■□□□□ 0.71
UBE2D3-215ENST00000503418 CYP2A6P11509 494 aaPredicted RBP19.48■□□□□ 0.71
UBE2D3-215ENST00000503418 KELP23276 732 aa19.48■□□□□ 0.71
UBE2D3-215ENST00000503418 HNRNPH3P31942 346 aaKnown RBP19.48■□□□□ 0.71
UBE2D3-215ENST00000503418 CCDC173Q0VFZ6 552 aa19.48■□□□□ 0.71
UBE2D3-215ENST00000503418 C3orf38Q5JPI3 329 aa19.48■□□□□ 0.71
UBE2D3-215ENST00000503418 ZFYVE27Q5T4F4 411 aa19.48■□□□□ 0.71
UBE2D3-215ENST00000503418 ARMC12Q5T9G4 340 aa19.48■□□□□ 0.71
UBE2D3-215ENST00000503418 NCBP2-AS2Q69YL0 99 aa19.48■□□□□ 0.71
UBE2D3-215ENST00000503418 PNCKQ6P2M8 343 aa19.48■□□□□ 0.71
UBE2D3-215ENST00000503418 H2AFVQ71UI9 128 aa19.48■□□□□ 0.71
UBE2D3-215ENST00000503418 PELI3Q8N2H9 469 aa19.48■□□□□ 0.71
UBE2D3-215ENST00000503418 SDR16C5Q8N3Y7 309 aa19.48■□□□□ 0.71
UBE2D3-215ENST00000503418 FAM71BQ8TC56 605 aa19.48■□□□□ 0.71
UBE2D3-215ENST00000503418 COQ10AQ96MF6 247 aa19.48■□□□□ 0.71
UBE2D3-215ENST00000503418 POLR1BQ9H9Y6 1135 aa19.48■□□□□ 0.71
UBE2D3-215ENST00000503418 FGF22Q9HCT0 170 aa19.48■□□□□ 0.71
UBE2D3-215ENST00000503418 UVRAGQ9P2Y5 699 aa19.48■□□□□ 0.71
UBE2D3-215ENST00000503418 DGKBQ9Y6T7 804 aa19.48■□□□□ 0.71
UBE2D3-215ENST00000503418 GOLGA6CA6NDK9 693 aa19.47■□□□□ 0.71
UBE2D3-215ENST00000503418 GOLGA6BA6NDN3 693 aa19.47■□□□□ 0.71
UBE2D3-215ENST00000503418 CASC3O15234 703 aaKnown RBP19.47■□□□□ 0.71
UBE2D3-215ENST00000503418 CBFA2T2O43439 604 aa19.47■□□□□ 0.71
UBE2D3-215ENST00000503418 PROSCO94903 275 aa19.47■□□□□ 0.71
UBE2D3-215ENST00000503418 HEXIM1O94992 359 aaKnown RBP19.47■□□□□ 0.71
UBE2D3-215ENST00000503418 PGLSO95336 258 aa19.47■□□□□ 0.71
UBE2D3-215ENST00000503418 GOLGA6DP0CG33 693 aa19.47■□□□□ 0.71
UBE2D3-215ENST00000503418 GARSP41250 739 aaKnown RBP19.47■□□□□ 0.71
UBE2D3-215ENST00000503418 ARSEP51690 589 aa19.47■□□□□ 0.71
UBE2D3-215ENST00000503418 SPIDRQ14159 915 aa19.47■□□□□ 0.71
UBE2D3-215ENST00000503418 SLC18A3Q16572 532 aa19.47■□□□□ 0.71
UBE2D3-215ENST00000503418 ANKRD20A8PQ5CZ79 823 aa19.47■□□□□ 0.71
UBE2D3-215ENST00000503418 RALGPS1Q5JS13 557 aa19.47■□□□□ 0.71
UBE2D3-215ENST00000503418 TAF8Q7Z7C8 310 aa19.47■□□□□ 0.71
UBE2D3-215ENST00000503418 LRRC49Q8IUZ0 686 aa19.47■□□□□ 0.71
UBE2D3-215ENST00000503418 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.47■□□□□ 0.71
UBE2D3-215ENST00000503418 SPOCK2Q92563 424 aa19.47■□□□□ 0.71
UBE2D3-215ENST00000503418 ATXN7L3BQ96GX2 97 aa19.47■□□□□ 0.71
UBE2D3-215ENST00000503418 NAF1Q96HR8 494 aaKnown RBP19.47■□□□□ 0.71
UBE2D3-215ENST00000503418 RBM15Q96T37 977 aaKnown RBP eCLIP19.47■□□□□ 0.712e-7■■■□□ 16.3
UBE2D3-215ENST00000503418 SEMA3CQ99985 751 aa19.47■□□□□ 0.71
UBE2D3-215ENST00000503418 LGR4Q9BXB1 951 aa19.47■□□□□ 0.71
UBE2D3-215ENST00000503418 GOLGA6AQ9NYA3 693 aa19.47■□□□□ 0.71
UBE2D3-215ENST00000503418 SATB2Q9UPW6 733 aa19.47■□□□□ 0.71
UBE2D3-215ENST00000503418 TTLL3Q9Y4R7 772 aa19.47■□□□□ 0.71
UBE2D3-215ENST00000503418 NPIPB15A6NHN6 443 aaPredicted RBP19.46■□□□□ 0.71
UBE2D3-215ENST00000503418 TCEA3O75764 348 aa19.46■□□□□ 0.71
UBE2D3-215ENST00000503418 CTPS1P17812 591 aa19.46■□□□□ 0.71
UBE2D3-215ENST00000503418 LHCGRP22888 699 aa19.46■□□□□ 0.71
UBE2D3-215ENST00000503418 TRIM23P36406 574 aa19.46■□□□□ 0.71
UBE2D3-215ENST00000503418 LSSP48449 732 aa19.46■□□□□ 0.71
UBE2D3-215ENST00000503418 TAS2R40P59535 323 aa19.46■□□□□ 0.71
UBE2D3-215ENST00000503418 GALNT2Q10471 571 aa19.46■□□□□ 0.71
UBE2D3-215ENST00000503418 TRIM14Q14142 442 aa19.46■□□□□ 0.71
UBE2D3-215ENST00000503418 ARHGEF7Q14155 803 aa19.46■□□□□ 0.71
UBE2D3-215ENST00000503418 PAFAH1B3Q15102 231 aaKnown RBP19.46■□□□□ 0.71
UBE2D3-215ENST00000503418 PDK2Q15119 407 aa19.46■□□□□ 0.71
UBE2D3-215ENST00000503418 PTPRRQ15256 657 aa19.46■□□□□ 0.71
UBE2D3-215ENST00000503418 SKOR2Q2VWA4 1001 aaPredicted RBP19.46■□□□□ 0.71
UBE2D3-215ENST00000503418 SPECC1LQ69YQ0 1117 aa19.46■□□□□ 0.71
UBE2D3-215ENST00000503418 USP45Q70EL2 814 aa19.46■□□□□ 0.71
UBE2D3-215ENST00000503418 HSD11B1LQ7Z5J1 315 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms